Os02g0817600

From RiceWiki
Revision as of 19:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0817600

Description

AUX/IAA protein family protein

Version

NM_001055057.1 GI:115449664 GeneID:4331149

Length

2429 bp

Definition

Oryza sativa Japonica Group Os02g0817600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35960232..35962660

Sequence Coding Region

35960565..35960620,35960838..35960899,35961030..35961132,35961382..35961680,35962217..35962539

Expression

GEO Profiles:Os02g0817600

Genome Context

<gbrowseImage1> name=NC_008395:35960232..35962660 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35960232..35962660 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaggaggagtagctgggcccaccgccggcgagccgccggggacggaggcggaggcggaggaggtggaggagagctcagctggggacgacgaggagctggagctcgggctcagccttggctccaagaaacagcagcagcagcagcatgcgccgtgccgaatcctgacggccagggacctgcagccggcggcggcgctgtcaccggactcctccgtgtcgtcgtcatcccccgcggcggcggcggcggcgggggggaagagggctgagggccccaccgccaccacctcgcctgggacggttgcttccggccatccacacagctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaatcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttctcataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcgttggagatgttccttgggaaatgtttgtcagctctgtgaagaggttgaggatcatgaggacatcagatgcgaatggtcttggtcagcgataccagggaattcacagaaccattgcttcaacaagaggcagatcctga</cdnaseq>

Protein Sequence

<aaseq>MRGGVAGPTAGEPPGTEAEAEEVEESSAGDDEELELGLSLGSKK QQQQQHAPCRILTARDLQPAAALSPDSSVSSSSPAAAAAAGGKRAEGPTATTSPGTVA SGHPHSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGR VAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDN SAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQRYQGIHRTIAST RGRS</aaseq>

Gene Sequence

<dnaseqindica>2041..2096#1762..1823#1529..1631#981..1279#122..444#agcttaattatagccttcctcctcctcctttcctccctctcgaggcccaggtgttcgtccgtgtcctcttctccactccacacacgcacacgcacaagccaagcagcaagcagcggcgccgatgagaggaggagtagctgggcccaccgccggcgagccgccggggacggaggcggaggcggaggaggtggaggagagctcagctggggacgacgaggagctggagctcgggctcagccttggctccaagaaacagcagcagcagcagcatgcgccgtgccgaatcctgacggccagggacctgcagccggcggcggcgctgtcaccggactcctccgtgtcgtcgtcatcccccgcggcggcggcggcggcgggggggaagagggctgagggccccaccgccaccacctcgcctgggacggttgcttccggccatccacacaggtgagctgagcagagcagagcagaacacaacaccttcagggttcttgcttcttctctgcctcataatttcatatatagcactatatttattactcgatacaaaaacagtttcttttatgattctctgaagtagtaagagtagcagtaataaatttgtctgcaagattggttgccacttgttctgctcactggttagcatcataggatatttgcatatggcttctcctgtagttgtgcatagaactcacatcagcaacaacctccaaaacctattattatctacactccacacctgtgctgtgcataagcttcttatccttccaaattcaaggacaaaaaatgacaagtttggtgcttgatctgcactctaatatgtaactacaaacacttttgtttgacttgtggcgctagtaagattttctctgaaatgaggaccagatatatatcagcaccagagttgctgagctacacctacacatgtagacttttcaatacatttcaactaatcccaactgcatttcctggtttggcagcagctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaatcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgatgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtgaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaagacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttctcgtaagctcgagtctgaactgtcactttaagtagctcacagtttcacatattttcaaatcacatcaagttaagtggaatcaagctttgctgcgcacaatacataataatagtgtaggacaatgagatagttttgcaaattaaaataatagccatgcttcatattgtacctagtaagtcgcaagcttttttcatgataggttgattcatcttgtccatgaacctgaattatggttatcttcgcattttcagataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcgttggagatgttccttgggagtaagtcgttgcactatgtagctattagaacctgggcactagaaatttttatagttctaattttcaaggcgacttcgaatagctattcaggtgacttattattacggtgttgccttgttcttgtgcgcagaatgtttgtcagctctgtgaagaggttgaggatcatgaggacatcagatgcgaatggtcttggttagattcttttctaccacctattacatttgatgctagtcagtcgtctgaatggaatcgattattgttgtatgtataacctgttgaactgaatctagaggataacttgaaatagcttgttttgccactagtaggattttagcactttaatcagctaaaacgcacccgtttaggttctaacctgatttgcgctcattttaccgacaatccgttgcaggtcagcgataccagggaattcacagaaccattgcttcaacaagaggcagatcctgagagcgtgtgacaaggaaaagagctataccgctggtgaagcttggagcgtgcttgatggttaattacttgtccagttaaaatagcagaaggctagtaagaaagagccacagggctcacccggttctgttatatttttgcctttgtggtgcctgtttttgtttgcactgtcgatctgcaagagcatatggtcgccttgctctgcttgcatgtacaagtatgtctttctagtagtttttatggtgtttgatgatgatccttgtgcctacctgattactactgactcttgcacagcctcacaaatctctatgaattagccctggagtttcattgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0817600, RefSeq:Os02g0817600