Os05g0103600

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Revision as of 10:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0103600| Description = Similar to Ankyrin-like protein| Version = NM_001060931.1 GI:115461592 GeneID:4337543| Length = 3899 bp| Definition...")
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Gene Name

Os05g0103600

Description

Similar to Ankyrin-like protein

Version

NM_001060931.1 GI:115461592 GeneID:4337543

Length

3899 bp

Definition

Oryza sativa Japonica Group Os05g0103600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:175760..179658

Sequence Coding Region

176019..176088,176257..176336,176433..176603,176708..176809,176925..176987
,177066..177212,177621..177746,178129..178215,178570..178709
,178861..178992,179075..179248,179332..179394,179483..179510

Expression

GEO Profiles:Os05g0103600

Genome Context

<gbrowseImage1> name=NC_008398:175760..179658 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:175760..179658 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacgccaccgccgccctctcagctcggagcaaggtgcaagctttcctcgaagcggctcgtgccggtgatctcgactccctcaagaagctcgctgcggcgctcgacgaggagggcaagggcgtcgccgccgtcgctgctgccgtcaaggacgccaacaagcgcaccgccctgcacttcgccgcccgcgagggccgcacccacgtctgtcacttcctcatctccgacctcgccctccccgtcgaccccaaggacgacgatggtgaaactccactcatccatgctacgcgccaagcccatctccaaactgtaacctatctgcttcaccatggagcagatccttccgttgcttcttccctcggagccacgccattgcaccatgctgccggcatagggaacctggaccttatgaaactatttctctccaagggggttgatgttgaatcagaaagcgatgccggcacacccctcatatgggctgctggtcatggacagcaagaggcagtcaaacttttgcttcaacacgatgctaagccaaatactgaaaacgatgatggtattacgcctttgttgtctgctgttgcagcgggttccctcccatgcttggatattctaattcaggcaggtgcacatccgaatatcagagctggtggagcaaccccattacatattgctgcagatggtggaaacatggaaataataaattgtttacttaaagctggaagtgaccccaatgcatgtgatgatgatggactaaagccaatacaggttgctgctttgaggaataaccgtgaagttgtggaacttcttttacctttgacatcaccaattccaggtgtttcgagttggagtattgatggaattatagaatacactaaatcagtcgaggaaaaggcacaggtaaaggaagctacaactcagaaagcagacagattacaagtaccacaacttgttgaggtgtcatctgaggcaaaagagagatcattggaggcaaaatcgagaggtgatgatgccttcagaaataaagactacctagtagcagtagatgcctacacacaggctattgagttaaatccaaacgacgccacgttgcattcaaacagaagcctttgctggctacgggcagggcaagctgaacgtgctctggaggatgcaagagcatgtcgagcgctgaggccagactgggcgaaagcttgctacagggaaggcgcggcactgcgcctgctgcagaggttcgaagaagccgcgaatgccttctatgagggggtgcagcttgagccagagaacggcgagcttgtgagcgcgttcagggaggcggttgaagccgggaggaaattccatgggacggacaagaagcaaaaggcagatgcatcaacgtga</cdnaseq>

Protein Sequence

<aaseq>MADATAALSARSKVQAFLEAARAGDLDSLKKLAAALDEEGKGVA AVAAAVKDANKRTALHFAAREGRTHVCHFLISDLALPVDPKDDDGETPLIHATRQAHL QTVTYLLHHGADPSVASSLGATPLHHAAGIGNLDLMKLFLSKGVDVESESDAGTPLIW AAGHGQQEAVKLLLQHDAKPNTENDDGITPLLSAVAAGSLPCLDILIQAGAHPNIRAG GATPLHIAADGGNMEIINCLLKAGSDPNACDDDGLKPIQVAALRNNREVVELLLPLTS PIPGVSSWSIDGIIEYTKSVEEKAQVKEATTQKADRLQVPQLVEVSSEAKERSLEAKS RGDDAFRNKDYLVAVDAYTQAIELNPNDATLHSNRSLCWLRAGQAERALEDARACRAL RPDWAKACYREGAALRLLQRFEEAANAFYEGVQLEPENGELVSAFREAVEAGRKFHGT DKKQKADAST</aaseq>

Gene Sequence

<dnaseqindica>3571..3640#3323..3402#3056..3226#2850..2951#2672..2734#2447..2593#1913..2038#1444..1530#950..1089#667..798#411..584#265..327#149..176#cgacgggacgggaggcttcctcctcctcctcctactcgagactcgacgccgccacctccacctcccgtctcgtctccagaagcttctggaacacccttccggcttcaattcccccctgctcgggtcgggtagctcccttccatcatccatggccgacgccaccgccgccctctcaggtacagtaccatcttccaactcaactgttgacctagtactagtactgaggtctgaggtctgaggtcgcttcgaattcattggctgcagctcggagcaaggtgcaagctttcctcgaagcggctcgtgccggtgatctcgactccctcaagagtaggtgcccccatgccttcctctctctctcctttgctttccttgcgtttcttctcatctcctctcctcatgcgccattgcagagctcgctgcggcgctcgacgaggagggcaagggcgtcgccgccgtcgctgctgccgtcaaggacgccaacaagcgcaccgccctgcacttcgccgcccgcgagggccgcacccacgtctgtcacttcctcatctccgacctcgccctccccgtcgaccccaaggacgacgatggtactactaactatcactatctcttactctcatctgatttcttcacaatctctcatccatcagtttacatccactccaccaggtgaaactccactcatccatgctacgcgccaagcccatctccaaactgtaacctatctgcttcaccatggagcagatccttccgttgcttcttccctcggagccacgccattgcaccatgctgccggcataggtaaaattcatcatctatttgccatttcacttcattctttccatggattgatggtctatactcttttcttttttctcccattttgattgtgccaacgcctctataaatgcgtccaacaccactctccttttttttttgtttgcatctgcagggaacctggaccttatgaaactatttctctccaagggggttgatgttgaatcagaaagcgatgccggcacacccctcatatgggctgctggtcatggacagcaagaggcagtcaaacttttgcttcaacacgatgctaaggttgctcctcaataaatccactatctcctatctcacttcatatctcactgatttaacgaacctgagcttctagtcattctgttcagaaatcttcattatgctgaaattttaatatgtcgccttttaatattgtcaaatactagtagcaactgacactttaacagtaaccaccaagggttctcaagcttgctattgttaagaagatgctatcttttggttctaatagcatctgtatctattatgtttctttgaattggacaggcttctctttgtttagcactcaaccacctttcaatcagccgttcatgtggcctttccttaacttttttactgaagctagttattgcttggcagccaaatactgaaaacgatgatggtattacgcctttgttgtctgctgttgcagcgggttccctcccatgcttggatattctaattcaggtacacaaatctaatttcaagagtaaaataccaaaatctgttgcttttactttaggatattatccacttcgatgccattcattggtcatatggtttctgtatgctatatttccttgtttagtaatctggcttgtgcaatgggggttcagacaagctcatttttcgtgttattgattagattgctgcatggcaaatcatagtatgtcacgttcttatatgtgtgctacctatatcaaaagattttgataagaggatcaaagtgtctgttcttacttttgtcatatgctgtttctgttcttggttttgtttgatgctctgttgcttctacaccccttacatctatgattcgtataaaaaaccgatcatataatctgctacacaggcaggtgcacatccgaatatcagagctggtggagcaaccccattacatattgctgcagatggtggaaacatggaaataataaattgtttacttaaagctggaagtgaccccaatgcatgtgatgatgtaagttgtacattaatcagaattccagtgtatcattaaatatttaaatgtcaatagccaggttcatgtgcattgattggtcaaaatgattcgtaagagggtgtcaagcgtttgctgtttgttccacaccatgtatgataatgaatatccctttcttggtcagcatgtgttactctgaaaatttccaccgtttcattatgcagtgaataactattgtaaccctgtagtgtattgtttagctggattggcaactgcttttgcaattccatcatctgtcctttcttgcattattattgagcaaacagcactgggctgcataatttcactgaaggacatgactgttgattttggtgtagcagtagagctaagtaatgctaatggttgaataactattatattcttctacaggatggactaaagccaatacaggttgctgctttgaggaataaccgtgaagttgtggaacttcttttacctttgacatcaccaattccaggtgtttcgagttggagtattgatggaattatagaatacactaaatcagtcgaggaaaaggtgcaacttcaatcttctcatgatctattactagttgcaagttctttgtcgatcccaatggttgaataaattttgcaggcacaggtaaaggaagctacaactcagaaagcagacagattacaagtaccacaacttgttgaggtgcattgcaatttactttatagttttattcatcttcaaggctccaactatttaataactgtaagactcaagatctaactattgctgcaaatggtgctttcctgacactgtacaggtgtcatctgaggcaaaagagagatcattggaggcaaaatcgagaggtgatgatgccttcagaaataaagactacctagtagcagtagatgcctacacacaggtaagaaccaaaccgcaagacagcgtgtatttttagaaaaggcgcataagtttatcatatgaactcaaattcaaagagtagaatggaatggaactacatttcaggctattgagttaaatccaaacgacgccacgttgcattcaaacagaagcctttgctggctacgggcagggcaagctgaacgtgctctggaggatgcaagagcatgtcgagcgctgaggccagactgggcgaaagcttgctacagggaaggcgcggcactgcgcctgctgcaggtctgttgatttcagtgataagtttgggaactgataggcagttgtgattacctacctatatatttgttgctgaagttgttccggtgataccaacagaggttcgaagaagccgcgaatgccttctatgagggggtgcagcttgagccagagaacggcgagcttgtgagcgcgttcaggtagtaaagccttcctctgtgagcaaagaaaagcaatgaattcctccgttgtttagcaattaacatagacatatatagggtgtcgttatgattggtttggaactcatgtgtgtatgtgtttgttattccatgcgacaagtgaagttgattacttaaactgattgacagggaggcggttgaagccgggaggaaattccatgggacggacaagaagcaaaaggcagatgcatcaacgtgatgtgtttttggaatggcttagacctatacaaggaggaatcactgaatctgtaccactagattagtattagtttggcttggccaagaaacggagcagctgaaatctgaacacctcttttgatgttgctacaaatttattatattagtatcaattactatcagattgaattctgtttgtgtcgtggctggttctagattcgagtggctaaactgtacccatgttcttcagcatttctttaatctacggtattgagaaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0103600, RefSeq:Os05g0103600