Os05g0103700

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Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0103700| Description = Protein of unknown function DUF1664 family protein| Version = NM_001060932.1 GI:115461594 GeneID:4337544| Length = 3...")
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Gene Name

Os05g0103700

Description

Protein of unknown function DUF1664 family protein

Version

NM_001060932.1 GI:115461594 GeneID:4337544

Length

3706 bp

Definition

Oryza sativa Japonica Group Os05g0103700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:180042..183747

Sequence Coding Region

180399..180650,180748..180837,180923..180978,181113..181176,181294..181326
,181437..181511,181606..181695,181808..181909,182112..182182
,182713..182866,182974..183050,183570..183606

Expression

GEO Profiles:Os05g0103700

Genome Context

<gbrowseImage1> name=NC_008398:180042..183747 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:180042..183747 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcttggcaacgtcgccatcctcgtcggctccggaattcttggatcagttcttgtaggtggtgatgccaaactccctagtgccggggaggtactttctggtgctgccaagtttgtcaagaagcatggaaacgaagggaaagatacatcgtctaacaccgatacacacaccgctcagctattatctcaggtcaaccatctcagacaggagatacaatctctaggatcaaggcctgttacagttgtcaccaatgctgctagatcaggacctggtacatttactataacagcggtggttgttgctggggctgttggctacgcctacattaagtggaagggctggaaactttctgatttgatgtttgtcacgaagcgtggcttatctgatgcttgcaatgtagttggcagccaattggacaaggtttcagatgatgtcacttctgcaaggaaacatctcgctggaaggattgatcgtgtggatatcagtttagatgaaacacaagaaattattgaagggacaagggatgaggtcacagtcatccatggggatctgagtgctttccaagaggatttacaatcagttaaccttgtagttcggagtctggaatcaaagcttgtgagtctggaatacacccaggatcatacggctaatggaatatctgacttggttgagttcacccagaaagccactattcgccaggtcccagcagcatccgttcctccagctattggatcttcagagcgagttgttaggagggtttcttcgttgcctcaatctactgctcttccagctctgccgacaaccgcacctgcagctgaaccatcacctagggcagaggtgccacaggaggaacagtggggttttgtgagcaaagcatcatctagtagggaaggattagggcgtttgcagcagcagcggagtgttgtgaccagaacgtcgtctatgagggaaggatctcctgaatcttcaaatggagcctcatcctcaactggagcaagcacaggaaggaacacaagcacaggaacaaacacaagcacgggcagatttggtgggctgaggcttcctggacttgggtttcttgcaagttcgacgagttag</cdnaseq>

Protein Sequence

<aaseq>MVLGNVAILVGSGILGSVLVGGDAKLPSAGEVLSGAAKFVKKHG NEGKDTSSNTDTHTAQLLSQVNHLRQEIQSLGSRPVTVVTNAARSGPGTFTITAVVVA GAVGYAYIKWKGWKLSDLMFVTKRGLSDACNVVGSQLDKVSDDVTSARKHLAGRIDRV DISLDETQEIIEGTRDEVTVIHGDLSAFQEDLQSVNLVVRSLESKLVSLEYTQDHTAN GISDLVEFTQKATIRQVPAASVPPAIGSSERVVRRVSSLPQSTALPALPTTAPAAEPS PRAEVPQEEQWGFVSKASSSREGLGRLQQQRSVVTRTSSMREGSPESSNGASSSTGAS TGRNTSTGTNTSTGRFGGLRLPGLGFLASSTS</aaseq>

Gene Sequence

<dnaseqindica>3098..3349#2911..3000#2770..2825#2572..2635#2422..2454#2237..2311#2053..2142#1839..1940#1566..1636#882..1035#698..774#142..178#aaaaaaaagtagtcgatcgatcgatcgagaggtttaatctgtcctccctctcgccggtcgccgccctcgtccccgccgccgccgccgccgttagattgaagcagagctacaggcaggaggggcttctcctcgcgcgccgccatggtgcttggcaacgtcgccatcctcgtcggctccggtgagtcactttccgccgtctgctccctcctgaggtccacccgcagccctagctagcttctcgtcgcccagcccagccggttgactttcgacttggagattgatagatagataggagtagatgccacttgcaaccatggcgcagtcatagatagattaccaaaccaatccctcccacttctagggaataccactaccaaatcccaacttatttgctcatcttgtacggagtattttgctttaccagattccaatacatagattgatctagccttttagggccggggccggggtttgtttagttcaactaagctttcgcttcaaaccagaggggaacttattacctgggtatcccactgctacatgaaacaccactgtcaaatcccccccaacttagtggcttccccagtacataggctgatcctgcctttctttttatcttaagtataattacgccttcactaaataactatactagttttactcggtaccaatgtttatgttgtttgcttgcctgcaggaattcttggatcagttcttgtaggtggtgatgccaaactccctagtgccggggaggtactttctggtgctgccaaggtattgtattattgcccctccatgccctaactatcaacccagaatactactgctatattgattatatatcttataactcaccgtcacatgattcctttcccccctagtttgtcaagaagcatggaaacgaagggaaagatacatcgtctaacaccgatacacacaccgctcagctattatctcaggtcaaccatctcagacaggagatacaatctctaggatcaaggcctgttacagttgtcaccaatgctgctagatcaggtaagttcctgctgactagttactatgttttagttacagacttatgcatgggtcacagatcatacaaacataaatttcacatgacactagactttgtgtatgccccgatgtcgacatctcttgctaagaattaatgcgattttagagtgttagatatttctattacctttcgatttttttttcagacttggtctgttgtttttatatctacatgttcgacagagctacaattgcgttgtctgttcatatacagagtataccattttgcgattcagttcacatgttcttttctttttctttccttattattatttgtcatggtcttggctatgcactactgattatcattatattattcgctgcattataaaggttcttggacacgtgatagtttttataattgctaataaactttcatcatgctcttttgcctttaaacatacacaattacatatgtttgcccctctaggttacacacattctttctcaaatgtccttgaacgacattcatgtaaatccttcttctgtaggacctggtacatttactataacagcggtggttgttgctggggctgttggctacgcctacattaagtggaaggtaatgtttgattctttcacctcaatggaagtacagaatgaggaggacataatctttgattattctagttgctatcttgatgtttattgttctgtccgtcattctagatcatggacgcaagtgcatattattacaatcctatctgcttgccatttcttgtttcactgttctagctagtttctaaagttacatagatttgcagggctggaaactttctgatttgatgtttgtcacgaagcgtggcttatctgatgcttgcaatgtagttggcagccaattggacaaggtttcagatgatgtcactgtaagtttttaacttctttcagcaacgctgaactcaaatgtgttacttgtgattccatgttttcattgttccaaccaaaacatcttactggcctttgattttcactattcagtctgcaaggaaacatctcgctggaaggattgatcgtgtggatatcagtttagatgaaacacaagaaattattgaagggacaagggatgaggttggaactgtttttccttttattttttgtgtttacttttatagtttttgatgcattttcggcgacctaatggcatttcatgactgacttgtaggtcacagtcatccatggggatctgagtgctttccaagaggatttacaatcagttaaccttgtagttcggagtctggtatgtgcctcgtaccggaacagattctaccttatttactgaatatccagatttctaccttatttactgaatattactcgtgtacattttttgtatcttgtatcatgcaggaatcaaagcttgtgagtctggaatacacccaggtgagtagaaagctcatgtttttttttttaggaaaagtagaagctcatgttaccactacatattaccaacaaactcatcgacatgctcctaatgctatcttcttaaaatccttttaggatcatacggctaatggaatatctgacttggttgagttcacccagaaagccactattcgccaggcaagtttgaatggtctagtgattccttaatgccatgcttcttctatgctttatttaacaaaaccagttgcacctcaactataagcatattcttttcctatatgcttattctgaagagatgtttttattttcaggtcccagcagcatccgttcctccagctattggatcttcagagcgagttgttaggagggtaaaggcttgcacttttcccagctttgtcatggtcggaacatgccccagtttgttgacttgggttcatgtgtttctggttgcaggtttcttcgttgcctcaatctactgctcttccagctctgccgacaaccgcacctgcagctgaaccatcacctagggcagaggtgccacaggtgtggtttcagtttgatgttgcactttgttgcatgcaatttcagtttcctcttgcgctttccatgattgaaacgagctattgctggacttttgcaggaggaacagtggggttttgtgagcaaagcatcatctagtagggaaggattagggcgtttgcagcagcagcggagtgttgtgaccagaacgtcgtctatgagggaaggatctcctgaatcttcaaatggagcctcatcctcaactggagcaagcacaggaaggaacacaagcacaggaacaaacacaagcacgggcagatttggtgggctgaggcttcctggacttgggtttcttgcaagttcgacgagttagttgatgaggtgtttttatttaagttaaaagatggtgctgccaggagctctccattgctttgcttgtagttttaggttgtacagtaggagagaagagataacagtagcagtgatgtgatggaacaacacatatacgtgcggggctgggctcgtttgttcttgaggaggccaaatttttgtagaaaaaagagaggaaaacatgtgcacctatgtatctatctatctatagccatgaatgcatcatccagggcaacaccttggtctttgatgtcgagatttttaacttaaaatgccaagagtactagtacttggttaattaattttatgaagacgagtcaactggttggttgcctttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0103700, RefSeq:Os05g0103700