Os09g0525600

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Revision as of 07:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0525600| Description = UBA-like domain containing protein| Version = NM_001070256.1 GI:115480254 GeneID:4347631| Length = 4885 bp| Definit...")
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Gene Name

Os09g0525600

Description

UBA-like domain containing protein

Version

NM_001070256.1 GI:115480254 GeneID:4347631

Length

4885 bp

Definition

Oryza sativa Japonica Group Os09g0525600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21367001..21371885

Sequence Coding Region

21367342..21367379,21367868..21367937,21368003..21368146,21368616..21368780,21368852..21369040
,21369121..21369361,21369447..21369547,21369739..21370276,21370384..21370445
,21371712..21371795

Expression

GEO Profiles:Os09g0525600

Genome Context

<gbrowseImage1> name=NC_008402:21367001..21371885 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21367001..21371885 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggccgccgcaggaggcgatcgacaccttcgtcagcatcaccggcgccgacgaggccctcgccgtccgcaagctcgaggaacatggtggcgaccttaacacggcaatcaatgcacatttcaatgaaggagacagtacagtgaacagagccagtcaaaacaatatacctgagagtcatgatgatatgatggacctggatggaccacttgataatgcatttagaagatctttgttccctgaaactttgcgtgacccttttgcactgatggacacaaactttcagcaaaattattttgacagagttggttccacagatactttcggtcatggcccacaggtttcacaccctagagaggtgcgagagatacctatcgaagttaaggatagcaacccgcaaacaggcccttctggtcaggcccctattatcgaggatgtcactgggcatgaatcttcatatggtcctgaagttcgtggggctattgtaattgatgatgatgatgatgagcagccatctgccccttctcttcatgctaatattgatagctcattgcagccgaacccttctattccaactgcacctccattggttcatgttactgactatgacaatgatatcgaagaggaaatgatccgggcagcaattgaagcttcaaaaagggatgctgaggcaatgacaattacagcagagcaaggaataacacagccgccagagggagtaaacattacagaacattcttttgatgaagaggacaagggaactgcaagcggaacagctggaaggcaaggattagctacagaaaaggttggatcatctaggcagccaatagatgaagataccctccaagaggagactgaagatgtagaagaacagccattagttagacgtcgttctagacgcatcccttctggaaacactgagtcagcacaacctgtgtacacggtcgatagtcctccctcaagttctcagcctcaaggaaatttgaatgatcgccagaataatggagatgaatttccatcagagtggggtggcatttcttctgaggagcatgatgaagctgttatgcttgaggctgcaatgtttggtggaattccagaaggacccatgtatccgttctcaatgccatctcatagaagcccaagtctttatccccatgtagagcatgctccatcaccagcattaactgaacagcggttgttacgtgagcagcaggatgatgaataccttgcatcactccaagctgatcaagaaaaagagttgaaggccctacaggaggccgagcttcgtcgcctggaagaaactgctgcaagagaagctgcccttgaaaaacagaagcaagaggaagaggaaaggcgtaaaaaacaactggaggaagaggagctagagtccagtcttgcatccaaacaagcatcattgccgtcagagccagctgcagacgaggaaggtgctgtcacacttgtagtccgcatgcctgatggtagtcgacaggggcgtcgctttctgaaatctcataaacttcagttcctttttgatttcttagacattggcaggacttataagccaggaacctacagactggtaattcgctactgtaaggtcgtacccaaggcgtgctttcaccactggtga</cdnaseq>

Protein Sequence

<aaseq>MARPPQEAIDTFVSITGADEALAVRKLEEHGGDLNTAINAHFNE GDSTVNRASQNNIPESHDDMMDLDGPLDNAFRRSLFPETLRDPFALMDTNFQQNYFDR VGSTDTFGHGPQVSHPREVREIPIEVKDSNPQTGPSGQAPIIEDVTGHESSYGPEVRG AIVIDDDDDEQPSAPSLHANIDSSLQPNPSIPTAPPLVHVTDYDNDIEEEMIRAAIEA SKRDAEAMTITAEQGITQPPEGVNITEHSFDEEDKGTASGTAGRQGLATEKVGSSRQP IDEDTLQEETEDVEEQPLVRRRSRRIPSGNTESAQPVYTVDSPPSSSQPQGNLNDRQN NGDEFPSEWGGISSEEHDEAVMLEAAMFGGIPEGPMYPFSMPSHRSPSLYPHVEHAPS PALTEQRLLREQQDDEYLASLQADQEKELKALQEAELRRLEETAAREAALEKQKQEEE ERRKKQLEEEELESSLASKQASLPSEPAADEEGAVTLVVRMPDGSRQGRRFLKSHKLQ FLFDFLDIGRTYKPGTYRLVIRYCKVVPKACFHHW</aaseq>

Gene Sequence

<dnaseqindica>4507..4544#3949..4018#3740..3883#3106..3270#2846..3034#2525..2765#2339..2439#1610..2147#1441..1502#91..174#ctccaccgcattgacacaaacacaaacagatcgatcgctcctatcctctttcccccttctcctcgcgtcgcctccacaacccaaccaaccatggcgaggccgccgcaggaggcgatcgacaccttcgtcagcatcaccggcgccgacgaggccctcgccgtccgcaagctcgaggtgcgtacatcccacatgccccccctccccgccttccccacctcccatctctccccttgtaatcccgtgcggtaaatcgcgtgcgcgctcgtggagggggtgcggatttgggcgagtcgggatgggggcgtggtcgcgtggagctagctaggtttgtgattcctcctcctcctccgggcgggggttcatgcggcgcggcgcgatgtggggggttgaggtggaggtgtggtgtgcgcccgatttgttttacttgccgtgaactcgtgatgaatctgtgaaggcgcttttacggaattgaattcgcttggaacaaatctcgtggcgttagctctgtctgattgcgagcttatcgcgctctgattttggtgggagcgcgggttttggtcacggaatctcggattgatttggcattgataccatatccctgttagatttgtagttccagtttcatatgacttcctcacgcgcattcaagttggggcttgtagagtttgtatgaaattcttgtgattgctcatctagagtgttcaataactcaacttaggtagttaggttttcgcaagctgtcaattcatggtttgtccatagtccctaccatccggtgtgctggattactggatctgatatttggttgtttgattttaacttgaacacaaaaaacacagctgggtatagtgctatctagagtaccttcgaatggccatacgcccctcacctcaatctagccatccctgtccctgtctcttctgctttgcttatcttctatctagtgtgatctgtcctgggcttagtcgcgtgtgggaggaaaggaaaaaaaaaaggtaagtgagcttagtgcaaattcctcagacatgctctgttgtattattccctccgttcccaattgatcatcatattacatgagagcaccaagaccaaggaaagccaataactctcctggagtaaatactggactatatttactccggtaacaaactcaatgcatgcaccatccccgctacttcctagataataacaaaacaagacattgcatgttggttgtagagggttgtgtgcatggatgtatgcggatatttactcccatgcacaaataacaaatagactttggtaatgaatactaatatgatgatcatttgggaatataccatgattaattagtaagtgagggagtacctctgaaatgattgttaactgcaatgatatttttcctttgggtttatctatattcatctatttataatggcttacctcatcactgtaactcaggaacatggtggcgaccttaacacggcaatcaatgcacatttcaatgaaggagacagtacagtgtacacctttactattttccatccaactttatttacatataagattgctttccatatgcccacactgtactgctagaactgatgaatgagatgctggtgttctacaggaacagagccagtcaaaacaatatacctgagagtcatgatgatatgatggacctggatggaccacttgataatgcatttagaagatctttgttccctgaaactttgcgtgacccttttgcactgatggacacaaactttcagcaaaattattttgacagagttggttccacagatactttcggtcatggcccacaggtttcacaccctagagaggtgcgagagatacctatcgaagttaaggatagcaacccgcaaacaggcccttctggtcaggcccctattatcgaggatgtcactgggcatgaatcttcatatggtcctgaagttcgtggggctattgtaattgatgatgatgatgatgagcagccatctgccccttctcttcatgctaatattgatagctcattgcagccgaacccttctattccaactgcacctccattggttcatgttactgactatgacaatgatatcgaagaggaaatgatccgggcagcaattgaagcttcaaaaagggatgctgaggcaatgacaattgtaagcttgcacaccctcatctcctttgctttagtctgccatgtgttcttttctcccatataaaaatgtgaatgattagaatgagcttgctacagctgatcctttattcgcaagtgtattaattttcctcaaccacgcttttgttaaacttctctttcatgtgccttacctacttgtttcaaaaatgttagacagcagagcaaggaataacacagccgccagagggagtaaacattacagaacattcttttgatgaagaggacaagggaactgcaagcggaacagctggaaggtgaatattaatttttactaacatgctctttaatcctcttgctacccagcacttgatcccttatacgtgtcctttcttttcggaggcaaggattagctacagaaaaggttggatcatctaggcagccaatagatgaagataccctccaagaggagactgaagatgtagaagaacagccattagttagacgtcgttctagacgcatcccttctggaaacactgagtcagcacaacctgtgtacacggtcgatagtcctccctcaagttctcagcctcaaggaaatttgaatgatcgccagaataatggagatgaatttccatcagaggtattcttttctgtaatactaatcttcaccctaaggttaaattatatgttattcactgtttgcctcttcctttggaaaagtggggtggcatttcttctgaggagcatgatgaagctgttatgcttgaggctgcaatgtttggtggaattccagaaggacccatgtatccgttctcaatgccatctcatagaagcccaagtctttatccccatgtagagcatgctccatcaccagcattaactgaacagcggttgttacgtgagcagcaggtttgatctttagtttgacctatttgttggtatatgcaatgaattgtcatgactgttaatttgatttacaggatgatgaataccttgcatcactccaagctgatcaagaaaaagagttgaaggccctacaggaggccgagcttcgtcgcctggaagaaactgctgcaagagaagctgcccttgaaaaacagaagcaagaggaagaggaaaggcgtaaaaaacaactggaggaagaggtaaacctttcgttaaaaataattatggaattaattgatcatcaacaacagtcttttcaatacttgaatgctaggtatttagatcataagttcacattttgagcatatgaaacttggtgctctggtgatctgctctattttatatgttacaaagggttctactttgaggcttagctgctggttgatatacttgatgaaactctgcataaagtctagatggatactacctagcatcatggcatcttctttcctgacattttgtattattatattgatattttctacattttgttgacaagcaattcgctaaagcagtatcaagttcttataaagctgtatgacaaacctggtgctttctttctgcagttccattgaggctttgtccattatttccttaattcatattgcacttgtattctgcaccatttgtaatgtgtgtgatgtggttcctgacgttttatgcaaacaggagctagagtccagtcttgcatccaaacaagcatcattgccgtcagagccagctgcagacgaggaaggtgctgtcacacttgtagtccgcatgcctgatggtagtcgacaggggcgtcgctttctgaaatctcataaacttcaggtaggcttactttctgtccttctgttttatgtggataaccactaatacatgctttcctcttgcagttcctttttgatttcttagacattggcaggacttataagccaggaacctacagactggtaattcgctactgttagttcttttttgaaggtcaccccctttatttgacgacatatattttatctgtactcccagaagagtgaatctagttgtggatgtgagaacgacgagtccatagtttagcttctaaaggatagggagattcatttcagggtacattaaagtgtttctttgctgctccttcgctgacttttctggtgatatactctagtagtatgtgcgacttctgatcttgttagctgaagggcttctgctaaatcaaagtttttaaaactaataggctactgatcttgttagctgaagggcttctgctaaatcaaagtttttaaaactaataggctactgccatgcttggaaaaccatttccacagtgtagctgctaccatttgatttgagtgggcatttcctttttcactcttgttaaaattgtggaactgttagaaattgtgtagtctgagacaattgtggaactcatacatgtaccattctgtgacatgcaggtaaggtcgtacccaaggcgtgctttcaccactggtgagggcgatatgtcatttagtgatctgggcctaacaagcaagcaggaagccttatttctagaaaagattacagaatagtgaagaaagatttagtcatggttagggacaccctcagaaagttgtgtttttacatttttttttatacttgcatcttgcttttgttagtaaaaatagtacaactggtttatggttcagttgagagtcctcttctgcggtgtgaaatggcggtgatgccgtgatgttgatacttctctccttttgagttcgatgttaatgtcagggtaaaccataaacaacatggagccaggatatttataggatgatgatacctttagttaaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0525600, RefSeq:Os09g0525600