Os05g0105100

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Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0105100| Description = Similar to Small GTPase rab11-related| Version = NM_001060943.1 GI:115461616 GeneID:4337555| Length = 2184 bp| Defi...")
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Gene Name

Os05g0105100

Description

Similar to Small GTPase rab11-related

Version

NM_001060943.1 GI:115461616 GeneID:4337555

Length

2184 bp

Definition

Oryza sativa Japonica Group Os05g0105100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:263033..265216

Sequence Coding Region

263121..263291,264603..265094

Expression

GEO Profiles:Os05g0105100

Genome Context

<gbrowseImage1> name=NC_008398:263033..265216 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:263033..265216 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggacgcggcgtgcggaggaggagtacgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaagtccaacctcctctcccgtttcacccgcaacgagttctgcctcgagtccaagtccaccatcggcgtcgagttcgccacccgcaccctccatgtggagggcaagataatcaaggcgcagatctgggacaccgcaggtcaagagcgatacagagctatcaccagcgcttactaccgtggagctctaggagcagtcctggtctacgacgtgagcaagcccacaacctttgacaacatcagccggtggctcaaggagctccgcgaccacgctgatgcaaacatcagaatcatgctcgtcggcaacaagactgatctgaagcaccttcgggccgtcgcgacagacgatgcgcacaagtttgctgaggcagaagggctgtcctacattgagacttcagctcttgaggccacaaatgtggaggaggcattccagctgattctcggtgacatttacagggccatcagcaagaagcccgtggcatcagatgaaggcggggcaggtgccgctggaggtgtcaaagaagggaagacgatcaatgtcgctgccggtgatgccaatagtgaaaagaagcaatgctgctcaacttag</cdnaseq>

Protein Sequence

<aaseq>MAGTRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESK STIGVEFATRTLHVEGKIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTF DNISRWLKELRDHADANIRIMLVGNKTDLKHLRAVATDDAHKFAEAEGLSYIETSALE ATNVEEAFQLILGDIYRAISKKPVASDEGGAGAAGGVKEGKTINVAAGDANSEKKQCC ST</aaseq>

Gene Sequence

<dnaseqindica>89..259#1571..2062#gagttgttgttgttgaggaggaagtgaagaagaggcagtagaaagaagtagcagtagcagaagagaagggaggaagggaattggatagatggcggggacgcggcgtgcggaggaggagtacgactacctgttcaaggtggttctcatcggcgactccggcgtcggcaagtccaacctcctctcccgtttcacccgcaacgagttctgcctcgagtccaagtccaccatcggcgtcgagttcgccacccgcaccctccatgtatgtccatctttcatctccttccttcctgcttactgtacttaccactagctctagctaccctagctgcttcgtaattcctttctcaatcaattcaattcctctttctcctcgcgcgatctaccattttctgcaagcaacccctcctctaccttagatccgatctttctcttcaaccagcaattcttttttattttgacaaatccagatcagggatccaatctgcaatcccctctctgtcgcattctgcttttttctcctgctaaaaaaaacgtgagctttgctacctagatctaccacacatgcttctgctcaaccatgatctactatcaccaatttcatcaattccacatctacctcgccactccactacttgcatcattttactccactaatttcgtttaacacacagaaaacagtttctttcttcttcttcttcttctttttttttaaaaaaaaaaaccagaggaggaactcaatacatacatacataataatatggagataggagtaacaagttgctgcagctcctgcttaaaaaataacaacagtgtgtgagcggagcgctcatccacatacatgtgggcgatgacgaggtgccagctgcgtgtgtgccttatgggatccaatggcttgattgtgatatcctgataggccataatcccaactgcgccaccacctttactactcgttcatctcactgtcacactcaattctgtacctggcttagcaactgcctgacagctactagtacctctgtccacagtaatagtttaatttccttttaacaaaagtaatactttccacagtaatattaataacctcttaaagtttctttctttctttcttgttgtacctgctaggcttgacagtgtctagctgcgaggcttaagctgctaaatgctaatgacaatcagcacacacttgttatataccgaccaagaaattgaaaatggaccaacacagagaattgtgacaccatgctctatgatactttgaagatataatagtctgcagttctagtcagattgtactaaattgtacactttgggatagcaccctctaatgaacttaccatgataaagtaataaacttccagtgccatatgcgtcatgcttatttggagtttggccttcaactcatcagccagttcagattctttccaagttccaaattatggcctctcctcccaattttatcttttttggatagttactgaacactagttctctctattgaatgtaaacaaatgcattagcgttggaaaaattgaaactgatccatttgcatgaaatctttgacttgatgtaggtggagggcaagataatcaaggcgcagatctgggacaccgcaggtcaagagcgatacagagctatcaccagcgcttactaccgtggagctctaggagcagtcctggtctacgacgtgagcaagcccacaacctttgacaacatcagccggtggctcaaggagctccgcgaccacgctgatgcaaacatcagaatcatgctcgtcggcaacaagactgatctgaagcaccttcgggccgtcgcgacagacgatgcgcacaagtttgctgaggcagaagggctgtcctacattgagacttcagctcttgaggccacaaatgtggaggaggcattccagctgattctcggtgacatttacagggccatcagcaagaagcccgtggcatcagatgaaggcggggcaggtgccgctggaggtgtcaaagaagggaagacgatcaatgtcgctgccggtgatgccaatagtgaaaagaagcaatgctgctcaacttagaacgaatccttcagtttcagatgtcatttcgtgtaccttgtgtggtgcttgtgattgttctttctttttaagtttattaaagcttcgttgattcattttgtcagataaatatttaccttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0105100, RefSeq:Os05g0105100