Os03g0106300
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os03g0106300 |
|---|---|
| Description |
PAIR1 protein (HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 1 protein) |
| Version |
NM_001055219.1 GI:115450166 GeneID:4331321 |
| Length |
4366 bp |
| Definition |
Oryza sativa Japonica Group Os03g0106300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:348672..353037 |
| Sequence Coding Region |
348802..348914,349203..349281,349515..349689,350095..350234,350317..350376 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:348672..353037 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:348672..353037 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagcttaagatgaacaaggcctgcgacatcgcctccatctccgtcctccctccccggaggaccggagggagcagcggcgcgtcggcttccggttccgtggcggtggcggtggcgtctcagccgcggtcgcagccgctctcgcagtcgcagcagtccttctcgcagggcgcctccgcctcgctcttgcactcgcagtcgcagttctcgcaggtctccctcgacgacaacctcctcaccctcctcccttcccccacccgcgatcagagatttggcttgcatgatgactcatccaagaggatgtcctctttaccagccagttcagcttcttgcgcgcgagaagagtctcagctgcaactggcaaaattaccaagcaacccagtgcaccgctggaacccctccattgcagatactagatcaggtcaggttactaatgaggatgttgagcgcaaatttcagcatctggcaagctcagtacataagatggggatggtggtagactcagtccaaagtgacgtaatgcagttaaacagagccatgaaggaggcatcattagattctggtagcatacggcaaaagattgctgtccttgaaagctcacttcagcaaattcttaagggacaagacgatctcaaagcactctttggaagcagcacaaaacacaatcctgatcagacaagtgttctgaattctctaggcagcaaattgaatgagatatcctcgacccttgcaaccttgcagacacaaatgcaagcaagacaactgcagggtgatcagacaactgttctgaattctaatgccagcaaatcgaatgagatatcctcgactcttgcaaccctgcagacacaaatgcaagcagatataagacaactgcggtgtgacgtcttcagagtttttacaaaagagatggagggggttgttagagctatcaggtctgtcaatagtaggcctgctgcaatgcaaatgatggcagaccagagttaccaagtaccagtttcaaatggatggacccagattaaccagacaccagtagcagctggaaggtctccaatgaaccgagcaccagtagcagctggaaggtcccggatgaaccaattacctgaaacaaaagtgctttctgcacatttggtttatcctgcaaaggtgacagatctgaagccaaaggtggagcagggaaaggtaaaagcagctccacaaaagccgtttgcttcgagctactacagggtggcacctaaacaggaagaggtagcgattagaaaggtcaatatacaagtgccagcaaagaaggcaccagtcagcataatcatcgagtcggatgatgacagtgaaggacgtgcgtcctgcgtgattttgaagacagaaacaggtagcaaggagtggaaagtgacaaagcaaggcaccgaagagggcctggagatcctgcggagggcgaggaagaggaggaggagagagatgcagtccatcgtgctcgcatcctag</cdnaseq> |
| Protein Sequence |
<aaseq>MKLKMNKACDIASISVLPPRRTGGSSGASASGSVAVAVASQPRS QPLSQSQQSFSQGASASLLHSQSQFSQVSLDDNLLTLLPSPTRDQRFGLHDDSSKRMS SLPASSASCAREESQLQLAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVH KMGMVVDSVQSDVMQLNRAMKEASLDSGSIRQKIAVLESSLQQILKGQDDLKALFGSS TKHNPDQTSVLNSLGSKLNEISSTLATLQTQMQARQLQGDQTTVLNSNASKSNEISST LATLQTQMQADIRQLRCDVFRVFTKEMEGVVRAIRSVNSRPAAMQMMADQSYQVPVSN GWTQINQTPVAAGRSPMNRAPVAAGRSRMNQLPETKVLSAHLVYPAKVTDLKPKVEQG KVKAAPQKPFASSYYRVAPKQEEVAIRKVNIQVPAKKAPVSIIIESDDDSEGRASCVI LKTETGSKEWKVTKQGTEEGLEILRRARKRRRREMQSIVLAS</aaseq> |
| Gene Sequence |
<dnaseqindica>4124..4236#3757..3835#3349..3523#2804..2943#2662..2721#1954..2253#1806..1858#1539..1679#1119..1269#227..434#97..155#gcaggaagaaattcaaatttgcgaatattctctctctctccccggcgaaggcgacggcgaaggagaaggctacggcgatcggcggcgatcggcggcatgaagcttaagatgaacaaggcctgcgacatcgcctccatctccgtcctccctccccggtaatccccttctgctcaatgctcatgcatgctgtgtttttgctcatggtggggtggtgtggtgtgttcaggaggaccggagggagcagcggcgcgtcggcttccggttccgtggcggtggcggtggcgtctcagccgcggtcgcagccgctctcgcagtcgcagcagtccttctcgcagggcgcctccgcctcgctcttgcactcgcagtcgcagttctcgcaggtctccctcgacgacaacctcctcaccctcctcccttcccccacccgcgatcaggtctcacctcacctcacctctcctctcctctcctctcctctccttctccccctcgctcttgtttctgccgcccaatggattttggtatttttcggtgccttactgattggggattccactcactcctgtccctgtgtgttgttcggtgtttatcagagtcttccgctgaattgccttgtggatttttggtgaaaatccatatcagattcagtattgatacagcatttgtcagttttttttatctctggtcgcagttgcaaaaaaaaaaatgtatgctgcagaacgactaatagatagtgcaaggtccaattactatgagtaggctgttcctgcaatttcagatttgttttgattactagtggtacaaattgctcactctgctgcccaccaccttgctgcacgcttgcactgataaatcagggaattgaactccgtttttgtctgtcctgtaaaactgtttgcaattgacacccacccttatacatgcagttacacgatttcattacatgaatgcctgttcctcataaattacttttgcattattcatggaagcatcattggtgcatcacaaactgagatttctgtacctgtgcatctaattacagcttgactagttagaaatggcatgtgtagtgttttgtatcttgcccattaacattcattcatgtcttcattgttgtacagagatttggcttgcatgatgactcatccaagaggatgtcctctttaccagccagttcagcttcttgcgcgcgagaagagtctcagctgcaactggcaaaattaccaagcaacccagtgcaccgctggaacccctccattgcagatactagatgtaaactctcaagacccacgcactacatctcatatatccttcatttcgtttataccagaatagcagcatttcacctgagttccaggcacactttgttttttccaactgggttctgtttttctattctgcatagaatgtaagatgatcgctgcatgcttttataatagaaagttcaattgaaatcattctttatctggactccaaatcactaagttgttgtactgccatagtattttctcatcagtataactgacagatgggtatatcagcaggtcaggttactaatgaggatgttgagcgcaaatttcagcatctggcaagctcagtacataagatggggatggtggtagactcagtccaaagtgacgtaatgcagttaaacagagccatgaaggaggcatcattagattgtaagcccctaactttcagtcataaagagttattgtgcaacttctgttttgtctatgaatttctgcactctatttctgtccttgttcagcaactggaactgaaagcaattatttttttatgtttagctggtagcatacggcaaaagattgctgtccttgaaagctcacttcagcaaattgtaaggataattgatggttcagcattttctccactttccctctttccttttcttttgtgcaacgtcagagttaacatactaccgtgttatcacagcttaagggacaagacgatctcaaagcactctttggaagcagcacaaaacacaatcctgatcagacaagtgttctgaattctctaggcagcaaattgaatgagatatcctcgacccttgcaaccttgcagacacaaatgcaagcaagacaactgcagggtgatcagacaactgttctgaattctaatgccagcaaatcgaatgagatatcctcgactcttgcaaccctgcagacacaaatgcaagcagatataagacaactgcggtgtgacgtcttcagagtttttacaaaagagatggaggtacttccagttttgatacaactctgataagtccaactgtccaagtgtctacaaattattctgaaaactatcatttgcatataaatgattatcattcttgtgtatgagcatgtgattttttttctggtatatccaaatatgacagttaagtttccatataagcatagttacctaaagttttcttctatattcaattattcatgatacttgagaacctaaggtccaatatattcagtatatgatatctttcagttttcggtttttatgagtctgatgatgtctgaaggagcaggcacaagtctgcgtgaacttaaatttgtcatgctcaaacctcatcaattcgcatagtgaaggcaaccaatgtgatgtttttgtctatatttgattgtgttttgcctgtttgcgcagggggttgttagagctatcaggtctgtcaatagtaggcctgctgcaatgcaaatgatggcagtatgtaaattcatgactcaagtaattttagccataagtcttccagtatctttctctaacttctttttggtcttggctgaaggaccagagttaccaagtaccagtttcaaatggatggacccagattaaccagacaccagtagcagctggaaggtctccaatgaaccgagcaccagtagcagctggaaggtcccggatgaaccaattacctgaaacaaaagtgtaattttctgctcttggctccttacatagttcagtcattagctatgtatttatcactactatagtatggagaattgaactgaaagacctcttgatggaatcaaattcaaatcggttttaaatccttgagatcctatttaaaatcaagtgttagaagcaattcaaaagaatgattaatattccattggtttcgttacgaagctggttaaatactgccagtttaaatctactagatagtaattattctaaattttgtataatggaacattatctcattttattggaaggaattgtgtcggtgcattccttcgagttgtgttactagcaagacttaagctaccaactgttcttcttcggatctttgttggattttctattctgacgaggattgtttgttaatgtcaggctttctgcacatttggtttatcctgcaaaggtgacagatctgaagccaaaggtggagcagggaaaggtaaaagcagctccacaaaagccgtttgcttcgagctactacagggtggcacctaaacaggaagaggtagcgattagaaaggtcaatatacaagtgccagcaaagaaggtaagccatgcagccctgctcctttctgtatcagtaacgaaagaacatgtttacaaggccaatttgttaacaagaagcatctcttgctctaattggtaatgttctaaaatcaatatcactgaatgtaccaaagtggcatagctttgtatcacgcaggtttaataaagatagtaggtggtcgccttatgttcaactcgtgatcatgtttgcttgcttgtgaatgcaaaatgcaggcaccagtcagcataatcatcgagtcggatgatgacagtgaaggacgtgcgtcctgcgtgattttgaagacagaaacaggtagctatcaaccgttgaacttcccctcgaaaagccagggtgcattcttttcgatggatgaaacccagcgggagatctaggggataagagagctgaattccatgcaaccaacaattaaaaacgatgctttcaatcactgaatctgctttgccggctgtcatggcgagtgattgcgtaatagagtagagtttcaatcatctagaatttacttacagtttgcgtttgattacccttctactgctactgctagtatttacgggttggtgcacatgtgaacatatggtgcaggtagcaaggagtggaaagtgacaaagcaaggcaccgaagagggcctggagatcctgcggagggcgaggaagaggaggaggagagagatgcagtccatcgtgctcgcatcctagctaattaatggtaacgccgcatgcatcgtcatcatcatctcaagattgactgattgttttaacataaagccaaacaaaggaaagagataaagattacgacaagacgaaattaaaaggtaaatcaaccact</dnaseqindica> |
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