Os05g0106300

From RiceWiki
Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0106300| Description = Protein of unknown function DUF6, transmembrane domain containing protein| Version = NM_001187239.1 GI:297723608 Gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0106300

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001187239.1 GI:297723608 GeneID:9272158

Length

1931 bp

Definition

Oryza sativa Japonica Group Os05g0106300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:323538..325468

Sequence Coding Region

323538..323710,323813..323875,323955..324071,324160..324274,324400..324558
,324999..325103,325205..325468

Expression

GEO Profiles:Os05g0106300

Genome Context

<gbrowseImage1> name=NC_008398:323538..325468 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:323538..325468 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagaagaagccatacgtaatagcgatgctgatacaagtgatttacgcgggtatgttcgtggtcaccaaggccgccttcgatgaggggatgaacaccttcgtcttcatcttctatcgccaggctgctgccactcttctcttgcttcctctcgctcttcttctcgagaggaaaaacgcgcgatcgatgtccttgatgttgctcatcaagctcttcttctgcgccttcatcgggaatacatttagcttgaatctgtacaacgtaagcatgaagttcacatctgcaacagtggcatctgcagcaagcaactctttgcctgtcatcaccttcttcctcgccctcataaccaggatggagtgtgtgaaggtgaggagctcatcgggcatagccaagctcgccggcgtggcgctctgcttcgccggagtcatggtgctcgccttgtacaagggtccggcgctgaacccagcggcggtgctcagggagttccccaacaagatgctggtgacggcggcgcagtgcgtcttctccacggtgcagacggcggtggtggcggcggcggcggagagggagatggccaggtggaagctccgcctcgacatcagcctgctcgccgtcctctacaccggtttggtggtgacgggggtgtcatactacctgcaggcgtggtgcgtggagctcaagggacccgtgttcttggccatgtccaaccgagatcgtccacctcggcagctaattgaattcatggacagtattataggggggattctgctggtgggagggctctacagcgtgctgtggggtaagagcgccgagatgacgatgaatggcaatggtgatgaccagcagcagcagcagcagcagcagcaatcccaccacaaaatttctacagagatggttgtggtggagaagacgatgatcagtggcagccaagagaaggatcagaataataatgaacaatccacaccaacaaaatcaccgcttcagcaagtatag</cdnaseq>

Protein Sequence

<aaseq>MEEKKPYVIAMLIQVIYAGMFVVTKAAFDEGMNTFVFIFYRQAA ATLLLLPLALLLERKNARSMSLMLLIKLFFCAFIGNTFSLNLYNVSMKFTSATVASAA SNSLPVITFFLALITRMECVKVRSSSGIAKLAGVALCFAGVMVLALYKGPALNPAAVL REFPNKMLVTAAQCVFSTVQTAVVAAAAEREMARWKLRLDISLLAVLYTGLVVTGVSY YLQAWCVELKGPVFLAMSNRDRPPRQLIEFMDSIIGGILLVGGLYSVLWGKSAEMTMN GNGDDQQQQQQQQQSHHKISTEMVVVEKTMISGSQEKDQNNNEQSTPTKSPLQQV</aaseq>

Gene Sequence

<dnaseqindica>1..173#276..338#418..534#623..737#863..1021#1462..1566#1668..1931#atggaggagaagaagccatacgtaatagcgatgctgatacaagtgatttacgcgggtatgttcgtggtcaccaaggccgccttcgatgaggggatgaacaccttcgtcttcatcttctatcgccaggctgctgccactcttctcttgcttcctctcgctcttcttctcgagaggtaactaattaattgattaattattttaaccatgcatgcatgcgttacttaattgcatctcaagctgttcattgatctgaatgtatggtgttgtatgtgtaggaaaaacgcgcgatcgatgtccttgatgttgctcatcaagctcttcttctgcgccttcatcgggtacaaattaattagcaatatacacgtacatggcatgcgtcttgagattcagatcaatcatcaattaattaatctgcaggaatacatttagcttgaatctgtacaacgtaagcatgaagttcacatctgcaacagtggcatctgcagcaagcaactctttgcctgtcatcaccttcttcctcgccctcataaccaggtaggagtacatacgtatatatcactgatctctctagctatagctagctcgttagtacatgagtatatatatatatatatacgtgtaggatggagtgtgtgaaggtgaggagctcatcgggcatagccaagctcgccggcgtggcgctctgcttcgccggagtcatggtgctcgccttgtacaagggtccggcgctgaacccagtgagccaccaccaccaccacatcgccagcttcgccggagcagcagcagcaggggagcgtggatccgaggcatcttcctgatggtgttggcgaacgtgacgtggtccatctggatcgtcctccaggcggcggtgctcagggagttccccaacaagatgctggtgacggcggcgcagtgcgtcttctccacggtgcagacggcggtggtggcggcggcggcggagagggagatggccaggtggaagctccgcctcgacatcagcctgctcgccgtcctctacaccgtaagctagctatactagacatgacctacgtcccagaaaaaaaataataataacttttagctataaacctagacaacagagacggagttacttgtgtattaacggatactcagaaacccagtttagaaaaaaaatttcagctataatttatctatttttaccgtatatacgtatcctcaatcgaaacttaattagacactcatatcaagttaaactcgatccaaaatagactaaaataagcgagtgaaaccttttcattttgttttagctccatcctaactggacacatgctatatccatattcatatgtagaagttggcttttttttttcaacggagggagttgctaactattgctgaatcatcgttttcgccgtcgtcgtcctagctcatcgatctcgatagattaatctccatggatggatgcaaatgcaattgcagggtttggtggtgacgggggtgtcatactacctgcaggcgtggtgcgtggagctcaagggacccgtgttcttggccatgtccaaccgagatcgtccacctcggcaggtaattactctacagctgattaacccgaccgaccgatcggttacattattaactgttgcaaattaattactcaatcaattatcaatggcctatatagctagctaattgaattcatggacagtattataggggggattctgctggtgggagggctctacagcgtgctgtggggtaagagcgccgagatgacgatgaatggcaatggtgatgaccagcagcagcagcagcagcagcagcaatcccaccacaaaatttctacagagatggttgtggtggagaagacgatgatcagtggcagccaagagaaggatcagaataataatgaacaatccacaccaacaaaatcaccgcttcagcaagtatag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0106300, RefSeq:Os05g0106300