Os03g0123200

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os03g0123200

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001055338.1 GI:115450404 GeneID:4331447

Length

1766 bp

Definition

Oryza sativa Japonica Group Os03g0123200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1300896..1302661

Sequence Coding Region

1301030..1301395,1301982..1302028,1302119..1302464

Expression

GEO Profiles:Os03g0123200

Genome Context

<gbrowseImage1> name=NC_008396:1300896..1302661 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1300896..1302661 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagctgaggagcagactccgcgaaccaaacccagcaccgggaacagcaagaagaggaagaagcccaggaaggacaagtggggccagcctatcatcgacgccggcgatcgcccggcggttgagccggagcctgagccagagccggagcctgtcccagcgcccgcagcggcggcggcggcggaggaggaggaggaggcggggatctatgaaaccggcaaggtggtggccagcggcctgccgtacaccaccaccgaggcggagatccgggagctcttcgagcggttcggtcccctccggtcgctccagctctctcgcttcccggactccggcaacttccgcggcctcgcgttcgtctccttcgagtcaaacgaggtggtaatgaagtctcttgagcttgacggattcaaaattggcaacaggtttatgagagttgaaagatgcaggttggctgctggctcgaagaggaaaaggactgtggagttccaaactgatcctaagaaggctgatgggtgtctgtcagcatatgttggcaatctcaaatgggatgttacagaaacagacttaagggacttcttcaagtcactgaagatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtcatgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaactgcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctga</cdnaseq>

Protein Sequence

<aaseq>MAAEEQTPRTKPSTGNSKKRKKPRKDKWGQPIIDAGDRPAVEPE PEPEPEPVPAPAAAAAAEEEEEAGIYETGKVVASGLPYTTTEAEIRELFERFGPLRSL QLSRFPDSGNFRGLAFVSFESNEVVMKSLELDGFKIGNRFMRVERCRLAAGSKRKRTV EFQTDPKKADGCLSAYVGNLKWDVTETDLRDFFKSLKISSIRFAINKRTGDSRGFCHV DFEDDESLEKAVGMNQSELRGRPIKISYAVSNRG</aaseq>

Gene Sequence

<dnaseqindica>135..500#1087..1133#1224..1569#ttatggtggccatgtcccaagtggatagacggtcctgatcttctgccgtgctgttctgctggtgttgccgcataacccacggcggcggcgcgtaggcaaagccgggaggaaggattagggtttaggcggcggccatggcagctgaggagcagactccgcgaaccaaacccagcaccgggaacagcaagaagaggaagaagcccaggaaggacaagtggggccagcctatcatcgacgccggcgatcgcccggcggttgagccggagcctgagccagagccggagcctgtcccagcgcccgcagcggcggcggcggcggaggaggaggaggaggcggggatctatgaaaccggcaaggtggtggccagcggcctgccgtacaccaccaccgaggcggagatccgggagctcttcgagcggttcggtcccctccggtcgctccagctctctcgcttcccggactccggcaacttccgcggcctcgcgttcgtctccttcgaggtaactgtcgaattaacacttctattatgctccattttatttccatcttgatgttgcaccaaataatttcagcatccgtatgattgtactactatttgtcttaagttgtcctggactttggaggtaacaaatggttggccgaatgctcatttgcagccatggccgcttcatcctctacctgaaattctgaatcaacttggtgttatgacttgctagttgctacagaggaagttgctgttatagtcttatggtctgcacctatccgattattgttacattgctctgattgtcgtttcactggtattgagaaatgtcgttctactggtgtatgtatcatattaaaagccttgtatagttgtattcctaatcttatactacaatccttggatgtctgtgcatggaacaatactgtatgtcatgactttgttggatcgatggaaagctgataaagaaataaaatttttaacagtggaattccttttcatactatatttgtaattttcatttgtcatggaacatacttgccaaagttggttacttttagtttgatttgatagactgattttgttctactgtgccatttcagtcaaacgaggtggtaatgaagtctcttgagcttgacggattcaaaatgtaaggatgaggagtggctatttctcttcaactcatggaagcacgccatggagcatttgctctatactgatatatgcattgtgtttacagtggcaacaggtttatgagagttgaaagatgcaggttggctgctggctcgaagaggaaaaggactgtggagttccaaactgatcctaagaaggctgatgggtgtctgtcagcatatgttggcaatctcaaatgggatgttacagaaacagacttaagggacttcttcaagtcactgaagatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtcatgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaactgcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggctactagatagtaaactttgagcatgagcgagcctcagtgttatgcttttgctccctcagttttgttacggttatatatccgtattaagtttctactgaaagtgttgtttcttgcatcaatctctatgtagaatgtaattcaccgtgtgacaaatacttggtgctacttaatatcgaccttataaacacttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0123200, RefSeq:Os03g0123200