Os05g0108400

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Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0108400| Description = Protein of unknown function DUF868, plant family protein| Version = NM_001060966.1 GI:115461662 GeneID:4337580| Leng...")
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Gene Name

Os05g0108400

Description

Protein of unknown function DUF868, plant family protein

Version

NM_001060966.1 GI:115461662 GeneID:4337580

Length

1122 bp

Definition

Oryza sativa Japonica Group Os05g0108400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:456051..457172

Sequence Coding Region

456148..457068

Expression

GEO Profiles:Os05g0108400

Genome Context

<gbrowseImage1> name=NC_008398:456051..457172 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:456051..457172 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggaccacgtcgtcgtgcagcagaggagcggcgaccagccggcgccgtcgtgcgacatcgccgccgacgagatcccggtcaacggccacaagccggggagggccgtcacggcgtcggtctaccgcgccaagatcgccggccactcgcgcgtcctcaccgtgtcgtggtcgcgggacatgctgtcgcactccttcgccgtgtccgtcaccggcgtcgacggcgcctccgcggagtgcagggtggacctccgcccctggcagttctggcggcgcgcgggttcacgccgcgtcgagctcgccggcacggcgccggccacggtgcgcgtcatgtgggacctccgccgcgcgcggttcggcgcggggctccccgagccgaggtcgggctactacgtcgccgtggaggccgcgggcgaggtggtgctggtggtcggcgacatgcggaaggacgcgctccggcgcgcgtcgccgcgcgcggcgcccgcggcgtgcgacgccgtccccgtggcgcggcgggagcacgtgttcgggaagcggcggttcgcggccaaggcgcggttccacgaccagggcaccgtgcacgacatcgcgatcgagtgcggcggcggcggcgagggcggcgacgcggacatggagatgacgatcgcgatcgacggcgaggaggcggtgcaggtgaagcacctgcaatggaagttcagaggcaaccagtccgtcaccttcagccgagcaaaggtggagatctactgggacgtccatgactggctcttcagcgccggcatgcgccccgccctcttcatcttccgccccatcgtcctctccagcgcctcggcgcccgccgccgccatgctcctcgacggctcgccgccgccgccgccggccaccggcttctgtctctacctctacgcctggaagctcgactga</cdnaseq>

Protein Sequence

<aaseq>MQDHVVVQQRSGDQPAPSCDIAADEIPVNGHKPGRAVTASVYRA KIAGHSRVLTVSWSRDMLSHSFAVSVTGVDGASAECRVDLRPWQFWRRAGSRRVELAG TAPATVRVMWDLRRARFGAGLPEPRSGYYVAVEAAGEVVLVVGDMRKDALRRASPRAA PAACDAVPVARREHVFGKRRFAAKARFHDQGTVHDIAIECGGGGEGGDADMEMTIAID GEEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSAGMRPALFIFRPIVLSSAS APAAAMLLDGSPPPPPATGFCLYLYAWKLD</aaseq>

Gene Sequence

<dnaseqindica>98..1018#atcgtcgtcaccagctagcgcatgacgtcatcctcgtcgtcgtcgtcgttgctccttttgtagtacgtagccatcgatcgatcacagctagctagccatgcaggaccacgtcgtcgtgcagcagaggagcggcgaccagccggcgccgtcgtgcgacatcgccgccgacgagatcccggtcaacggccacaagccggggagggccgtcacggcgtcggtctaccgcgccaagatcgccggccactcgcgcgtcctcaccgtgtcgtggtcgcgggacatgctgtcgcactccttcgccgtgtccgtcaccggcgtcgacggcgcctccgcggagtgcagggtggacctccgcccctggcagttctggcggcgcgcgggttcacgccgcgtcgagctcgccggcacggcgccggccacggtgcgcgtcatgtgggacctccgccgcgcgcggttcggcgcggggctccccgagccgaggtcgggctactacgtcgccgtggaggccgcgggcgaggtggtgctggtggtcggcgacatgcggaaggacgcgctccggcgcgcgtcgccgcgcgcggcgcccgcggcgtgcgacgccgtccccgtggcgcggcgggagcacgtgttcgggaagcggcggttcgcggccaaggcgcggttccacgaccagggcaccgtgcacgacatcgcgatcgagtgcggcggcggcggcgagggcggcgacgcggacatggagatgacgatcgcgatcgacggcgaggaggcggtgcaggtgaagcacctgcaatggaagttcagaggcaaccagtccgtcaccttcagccgagcaaaggtggagatctactgggacgtccatgactggctcttcagcgccggcatgcgccccgccctcttcatcttccgccccatcgtcctctccagcgcctcggcgcccgccgccgccatgctcctcgacggctcgccgccgccgccgccggccaccggcttctgtctctacctctacgcctggaagctcgactgatccattattgagctagctagcttctttcattggcggctggctctgataccatgttgattagatcggggattcttgatcgaaacgaaaatgcgaagttgtgagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0108400, RefSeq:Os05g0108400