Os03g0152700

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Annotated Information

Function

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Expression

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Evolution

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References

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Structured Information

Gene Name

Os03g0152700

Description

RNA-binding S4 domain containing protein

Version

NM_001055529.1 GI:115450786 GeneID:4331652

Length

5019 bp

Definition

Oryza sativa Japonica Group Os03g0152700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2879932..2884950

Sequence Coding Region

2879967..2880516,2880646..2880725,2880987..2881087,2881204..2881270,2881384..2881477
,2881563..2881611,2881982..2882132,2882832..2882987

Expression

GEO Profiles:Os03g0152700

Genome Context

<gbrowseImage1> name=NC_008396:2879932..2884950 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2879932..2884950 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccctcgccgccgccgccgccgccgcggcagcggccgtctccttcccgcccttgctctcccgtcccgccgcctgcgtgctcctccgctgcggccgccaccgccgcctccctcccctcctcctccgcgccgcctcctcctccacctccagcgccccggacttcaacatcaccttcgcggagcccaccgcccccgccccctcgaaacccaaaccctcatcccccgccccgtccgcggagcaggtggtgccgtggatcgtgcgtggggaggacggcaagccgtccatgcgcaccgcgccgccgccggacgtcctccaggccattgcgctggcggaggcggaggccaagaaggccaagaaggacccccgcaggagccacaagggcgccgccgcccttgccacccccgtcgccaatgccaaggtgagggagaggaaggccgcccccgcgacggcgccgcccaagttctccaaggccgcgaggagattctacaatgagaatatcaaggagcacgaaccgcagcggctcgccaaggtccttgccgcggcaggagtggcctcacgaaggacatgcgaggagctcatcttccaagggaaggtgaccgtcaatggttctgtctgcactgcaccccagaccaaagttgacatctcaaaggattctatctatgttaatggaaaccgcatttccaagaagcttcctccgaagttatattttgctgttaacaagccaaaagggtatatttgttcctgtggtgaaccaaagtccattatctccttatttgatgactatttgaagggttggaacaagattcaaccaggagtaccaaaaccgcgcttgtttactgtgggtcgtcttgatgttgctacaagtggtttgataataattacaaatgacggtgagtttgcccagaaactctcacacccttcgtcaaatataatgaaggaatatgtggtaactatagatggaccagtgcacagaaatcaccttatagctatcagtgaaggcacaaaaattgatggcgtcaaatgtatacctgatctagtggaaccattggatgtacaatccaatacaaaaaggacccggattagaatagcggttcatgaaggaagaaatcatgaagttcgtgaactcgtgcagaatgcaggcctagaggtttgtttgtatgctcaatattttttttctcaagttttccctttatgttttattgatcatatcttaacatttcccattgtgcaatatcaaatttggtaa</cdnaseq>

Protein Sequence

<aaseq>MALAAAAAAAAAAVSFPPLLSRPAACVLLRCGRHRRLPPLLLRA ASSSTSSAPDFNITFAEPTAPAPSKPKPSSPAPSAEQVVPWIVRGEDGKPSMRTAPPP DVLQAIALAEAEAKKAKKDPRRSHKGAAALATPVANAKVRERKAAPATAPPKFSKAAR RFYNENIKEHEPQRLAKVLAAAGVASRRTCEELIFQGKVTVNGSVCTAPQTKVDISKD SIYVNGNRISKKLPPKLYFAVNKPKGYICSCGEPKSIISLFDDYLKGWNKIQPGVPKP RLFTVGRLDVATSGLIIITNDGEFAQKLSHPSSNIMKEYVVTIDGPVHRNHLIAISEG TKIDGVKCIPDLVEPLDVQSNTKRTRIRIAVHEGRNHEVRELVQNAGLEVCLYAQYFF SQVFPLCFIDHILTFPIVQYQIW</aaseq>

Gene Sequence

<dnaseqindica>36..585#715..794#1056..1156#1273..1339#1453..1546#1632..1680#2051..2201#2901..3056#gataaaccccctcccacactctccactctcgagccatggccctcgccgccgccgccgccgccgcggcagcggccgtctccttcccgcccttgctctcccgtcccgccgcctgcgtgctcctccgctgcggccgccaccgccgcctccctcccctcctcctccgcgccgcctcctcctccacctccagcgccccggacttcaacatcaccttcgcggagcccaccgcccccgccccctcgaaacccaaaccctcatcccccgccccgtccgcggagcaggtggtgccgtggatcgtgcgtggggaggacggcaagccgtccatgcgcaccgcgccgccgccggacgtcctccaggccattgcgctggcggaggcggaggccaagaaggccaagaaggacccccgcaggagccacaagggcgccgccgcccttgccacccccgtcgccaatgccaaggtgagggagaggaaggccgcccccgcgacggcgccgcccaagttctccaaggccgcgaggagattctacaatgagaatatcaaggagcacgaaccgcagcggctcgccaaggtccttgccgcggcaggaggtagtcttcctatcacgcatgattttactgaagtgcttgaattggacagaatcaattcaatcaaagttatattacttagttacagcaacacatcagttgtctgaatgctggcctgattgctccttccagtggcctcacgaaggacatgcgaggagctcatcttccaagggaaggtgaccgtcaatggttctgtctgcactgcaccccaggtatgtttttttttttagctttatgaatgatgaaatgctacttctctaagtttgttgcatgtctaagtaatgttttagctcttatcctcatttatttggtgctggtctgagaccagctatcgtactattgcggtaaaatataaattgttttaatttagctaggtcattttactatgaattttgatccatgtgcttcaaatgtattcatagacaagtttattatttgttacatatgattcttatacattcttttttatgtagaccaaagttgacatctcaaaggattctatctatgttaatggaaaccgcatttccaagaagcttcctccgaagttatattttgctgttaacaagccaaaagggtcagctcttatattccattccgctatcttgttccatcaaagcatttttgaaatatatatggaggcagcagtccatatgagcaacatatctaaatgttatttccaatgtactgcaggtatatttgttcctgtggtgaaccaaagtccattatctccttatttgatgactatttgaagggttgggtatgttcttttttttttatagtgatggtacttcctaatatttgtgaaatctttcacctcttatgctttatagctaggacttacaattttccattttcaattaacatttgcagaacaagattcaaccaggagtaccaaaaccgcgcttgtttactgtgggtcgtcttgatgttgctacaagtggtttgataataattacaaatgacggtaatttcattgtatttcataataaatacttgggaatcaatattttgaccatccaatacctaaagttagtttgtttctctttcaggtgagtttgcccagaaactctcacacccttcgtcaaatataatgaaggagtaagctcaacttcttgtgtccttcgaagtacagtaatacaaaatcacgtactaggaacactgtagacactatccagatcttttgtagaagaaaatttaacagtctgttggtatcactctcatttatttggagaaacgcctaggggtcttccggctagctccacaaggtggtgggctagccggcctgggttcgaagcctcaccttttctatttatttgatattaggccattccctaatattcacatttttttactctcatttattcattatcaatatgcactggtaattgcgaaaagaaatatctgaaatatcatttttatcaaatttcaaatgaaaccaacattgactttgagttgtttgatcttgcagatatgtggtaactatagatggaccagtgcacagaaatcaccttatagctatcagtgaaggcacaaaaattgatggcgtcaaatgtatacctgatctagtggaaccattggatgtacaatccaatacaaaaaggacccggattagaatagcggtacttatattttctattatacctcattttattagattccggattgactttactgtctgtttcatgaattccaaattcttcataggataatgtagaagataggcaacttggctctttctgttcagtgaaaaatataccctagcaatgaatctatcctatcattcctttatgggatatacaacatgatacatgacacacgaaaggtctctttagatagtatcttgcggtcaagatttatttttaaatgtcatgacaagctaaagtggttagtgattatgtaaagttcactttaaatgtctaacaggcagttggttggatcgataatttgcctcacctgcttactttttcaaatgattgaaaccgtggaaaccataagaaactggtaattctgcaaagcttaagcaataatatgtttcgcattgttcaaaactagctaaataattttaacatgttaccagctaatttggaaccatttcttgataatatttcagccctgtgagtaaaaaccagtgtagaaggaaaagtcactactctgggcaacatacagtattttcaatgacatcaatatgttatggacttattgctcaaaattcttgcatgtattcttaactaaagcaattctatagagatgtaaacttgcaaaggcatagcatttggtcatctactcattggtatgctattttttttaatgtctggcaggttcatgaaggaagaaatcatgaagttcgtgaactcgtgcagaatgcaggcctagaggtttgtttgtatgctcaatattttttttctcaagttttccctttatgttttattgatcatatcttaacatttcccattgtgcaatatcaaatttggtaactcaagtaatttggttctagaatcaagagcaaatgttgtttgttaatcccttatctgattgaattgttagaaatgaggacgattaatgatcagtagcactattgacaaattaacagtatgttttagaagaggattgaaatgcatcttatgtgcttcagagtcttcttttcaacagaaatattattatgatgatcgaatattacaacgacagagattagcagtgtgctaaagacatagtgtacttactaaaaaaatgtcatacacctagcacattgcgcttcagagtttttcttctcaaacctgcttatgatgatatactacattctactatatagttcttagaacagtagcttttgagatgcctagcatgtttattagttgatattatctcaaagcactttgcagatctcaattcttgtgcttctacaagcactacagtgcataagataaattgtactaactgtaatacctgtacaacggaacatcacttgtctgaaagattttgttcacatcagcttgggatttcttcctagtcttaggtgtttctaaaaacaacagtgaagtctaagaagtgcacttatcttatattcttatgggtgaggtaggcatatatccttgtgtaccagtaagtgcgttttttgctggaattgtataccttggaatgttttcccccctctgggaagtagctgatattttatccttgttcttgataggtttatgccttgaaacgtgttcggataggcaggttcaggcttccaccagatctcaggtaatgcagtttaccacatctgtatatgtttgaaatggaccattatacatttacactgtctttttagcatcttagcacctactcgacatgacatgttcttttcatgtaaaagatatgaacactgaacactatatactgtaagaaaaagatcatgtctatgaaacatcgcaagaaagagcatggcactttcttgctgtaaatgatatgaacaataactatatcataagacctgtcaaatattgtgaggtaacatggtgctgtatacttgatagcatctgccagcaggcatgctaagacctgtccagtatagttggctgattcaaagataactggtatgccatcattttagaggcatgattccatgcacaaaatgataaattaatttggtatcctggacctttttgttttccatttattcttacagactgggaggaaaaataacactgaatattaacccttgttggatgttacatgttcagaattgggaagtttgttgaacttaaacaaactgatctcaagtcactggaaggcaagaagtagagtgaaaacctgggtccacgggtgctaatttcgacggtaatgtggatccgcacaactccatcgaagaatagcaattgctccttctcacgtcaaggtgaaagctactccacaccaatgcctgtacgttaagttggtgcggatggtgaagatagacaaagacatacttttggcttgaagaacacacaagctgcttggaagaacattttccagtgcccaacaaggcagcagtgtttggtggtggagatgggatattgtcaggttgagggttagtgatagaggctacactttatcaatatatatggtggtggagatgggatattgtcaggttgagggttagtgatagaggctacactttatcaatatagatgctcttacgtgaggtacaggaggtatacgaaccattttgctacacgattcaacacttatcaacaagtagcaatccaggaggtatacgaaccaaattctctcgtaatctgtattttgagcaggaattaaccatgttatggttctgctacagctggaatattattgtgattgacaaaagcatgttcctttttattcttgaacattttgccaatggtagcaatgctacccaaaaaaagacattgtataagtgggtatttgaaagttgctaaaaaatggagtaaatttcat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0152700, RefSeq:Os03g0152700