Os05g0110400
| Gene Name |
Os05g0110400 |
|---|---|
| Description |
GRAS transcription factor domain containing protein |
| Version |
NM_001187245.1 GI:297723620 GeneID:9271968 |
| Length |
6573 bp |
| Definition |
Oryza sativa Japonica Group Os05g0110400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:532753..539325 |
| Sequence Coding Region |
532753..534690,535428..535493,536572..538644,539239..539325 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:532753..539325 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:532753..539325 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcccatgcccctcttccttcacttctgtgtctcaaggaacctatatatgatgttgttgctgaattggaactgctgataagtaagcagcaactcagcttgtacaactacagccccagcgatccgcagctgttttcccagccaaccacaggatcaagaacgtatttgtcaggtgcagtcaccatccctgggatttgcaatgacaaaagtaatcttggacaacaacaatttcagattgatgcagcgcttagtctagggtaccagaggatcagatcaagcgatgccctttgctacataagtcgggtgctgatggaggacgtcgatgagagggttgacctgcaccaaggggaggctgctcttcaggctgcagagaaacccttctatgatattcttggccaggtatatccaccatcgctaaaccggctagcactccatagcgcaaatgaaccagatacgcctgatgagagcagtagcagaaacaattatcataataggtaccatagtagccattccagtttcaacatgttacagcccttgccaaccccattgagtccatatagctatggcaggagtctttttcttccaaaccaacacttggtaagcactgcctggacttctacctttggcatccctggcttccaaattagaagaggtgccgaggaggcaaagagatttgttccaattattgataagttggtgatcgatttggacactgaccgggggctctccatttcaaaaatgaccacgaaggcaaaagtaggagacaagaaaagatatgcaatctttgagttgacagatcaaaggcacagcccttacaccacagacttggatatcttggaagggaggaacagcaaacgctatgccatcacttactgtgaaataatccggaatgatatgtttgacagggttctgctctgctatggtgtggagaatttcgccgaagcatcaaatcttcgaaaaataatgacgaagcaagcacgcaagaattcactgaatggacaaaccagaggatctgcacaacggaaattacggggtatgaaacaactcaagaaggatgtagttgatctcaggaatctcctcatccactgtgcacaagcagtagcagctgacgaccgcatttcggccagtgaactagtgaagaagataagacagcattcttcaccagatggagatagtaaccagaggttggcattttacttggtggatggtctggaggcgcgcttggctgggatcgggagccaggtgtatcgcaagctcatggcaagccgaaccagtgctgagagtttgttgaaggcttacagcctctacctttcagcttgccctttcgaaagggcgtcattcgcctatgcaaaccaaactattcttgatgcatcaaaggggcagcaaccaagaaaggtgcacattgttcatttcggcatttgcactggctttcagtggccatcattgattcagcggcttgcaaatgaagaagggggtccacccaagcttaggatcacaggtatagatatgccccagccaggtttccacccctgtgaaataattgaggagacagggaagcggttggctgattatgcaaacttgttcaaggtgccttttcaatatcagggcattgcttcacggtgggaaaccgtacaaattgaggacctgaacattgacaaggatgaagtgctcatagtcaactgtatgttcaggatgaagaatcttggtgatgagatggtatctatgaatagcgcaagggatagggtgctgaaaataatgaggatgatgaacccaagggtttttattctcggtattgtcaatggatcatacagctctcccttcttcatcacacgtttcaaagaggttctgttccattactcttcattgtttgacatgattgatgcaaatgttccacgggataacgaggcgaggaagatgatagaggggggactctttgggcaggaagcacttaacatcatagcatgcgagggtgcagaaaggactgagaggccagaaagttacaagcagtggcaagcacggtgcctcaaggctgggttcaagcagctccctgtcgatccagccaccttgaaagagataataaatatgaagaaagggatttaccatgaggactttgtagctgatgaagatggtgcctggctactacaaggatggaaagggagaaaaagtgtcaagaagaaggttacaagaaataaccctaatattaatcagccagatgtcaacaagaaaatcacaaatttctgcttcagaagcttaaagcaatgcaggtctagcataatggacagccctgagtattgtcagaccaactcaaacataactcttgattatataaacagaatattgatggaggaggatattgatgaaaagatcagcataaaaaaaggacaggatgcacttcaggcgacagagaagcccttctatgatattcttgggaaggcatacccatcttcatctaaggagacagcaattaacggtgacagtcaagcagattaccctgataatggtagcagcagttatcatgaacaggcatgtagtggtagctttgttagtgatctccttgggtcacaggatgcgcattcgataaccaccgactggtcttctgaatttgaccgtttggctttgcaattcaggagaggtgttgaggaagcaaagaggttcattccaaatattgaaaagttggtggatgatccagagaagaatggtctttatgcttgcaaacaaacaacagagacaacagaacagaagggcaagcatgagaacaaaataaggaatcatcctcatgatcctcatgttgagcacatagagttgatggaagcaaggaacagtaagcatatggccatctccactagtgaaacaatacgggatgaaatgtttgatagtattctgctctgcaataggcagctccctggtgaagttgctaaccttagaggaatgatggcaaaagaagcaagcgacaacccaaagaaatttcaaagcaaaggatatggaaaagggcaaaggaagccacacagtagtaagaagaaacagaaagaggcaatagatctcagtgttcttctcatccaatgtgcacaagcgatagcatctaacaaccatccctttgctagtgagctactgaggaaaataaggcatcacgctttgccagatggagatggttctcagaggctagcaaactgctttgcagatggcctcgaggctcgcttggctgggactgggagtcaaatgtacgaaaaactgatggcgaaacaaacgagcaccagagacatgctaaaggcctatcatctatattttgtagcatgcccttttgagatggtaacatactacttctccaacaaaaccatcattgatgcattggaggggaaaacaacattgcatatcgttgattttggcatcctcttcggctttcagtggccatgtctaattcagcgacttgcaaagcgagaaggtggcccccctaagcttcgtatcacaggtgtagatgtaccccagcctggttttcgccctcatgaaaggattgaggagactggaaagcggttggcagagtatgcaaatatgttcaacgtacctttccagtatcatggcattgcttcaagatgggaaactatctgcatcgaggatctcagtattgacaaggatgaggtactcataatcaactgcatgtcacgaatgagaaagctaggtgatgagacagaaaacattgatagtgcaagggatagggtactacacatgatgaagaggatgaacccgcaggttttcattcttggtgttgtgaatggattgtacagctccccattctttctgactagattcagagaggttttattccattactcatcactttttgatatgctcgacaacaatgttcctaggaaccatgaagcaaggatattggtagagaaggatctctttgggaatgatgcacttaatgctgtagcatgcgaaggtgcagaaaggattgagaggccagaaagctacaaacagtggcaaatgaggatcctcagggctgggttcaagcaacgtcctgttaatcaagccattctgaatagatcagtacattacaaggaattttatcatgaagactttgtaattgatgaagatagtggctggctgctgcagggatggaaggggaggataatacaggcactgtcaacatggaaagtggaaacctag</cdnaseq> |
| Protein Sequence |
<aaseq>MAHAPLPSLLCLKEPIYDVVAELELLISKQQLSLYNYSPSDPQL FSQPTTGSRTYLSGAVTIPGICNDKSNLGQQQFQIDAALSLGYQRIRSSDALCYISRV LMEDVDERVDLHQGEAALQAAEKPFYDILGQVYPPSLNRLALHSANEPDTPDESSSRN NYHNRYHSSHSSFNMLQPLPTPLSPYSYGRSLFLPNQHLVSTAWTSTFGIPGFQIRRG AEEAKRFVPIIDKLVIDLDTDRGLSISKMTTKAKVGDKKRYAIFELTDQRHSPYTTDL DILEGRNSKRYAITYCEIIRNDMFDRVLLCYGVENFAEASNLRKIMTKQARKNSLNGQ TRGSAQRKLRGMKQLKKDVVDLRNLLIHCAQAVAADDRISASELVKKIRQHSSPDGDS NQRLAFYLVDGLEARLAGIGSQVYRKLMASRTSAESLLKAYSLYLSACPFERASFAYA NQTILDASKGQQPRKVHIVHFGICTGFQWPSLIQRLANEEGGPPKLRITGIDMPQPGF HPCEIIEETGKRLADYANLFKVPFQYQGIASRWETVQIEDLNIDKDEVLIVNCMFRMK NLGDEMVSMNSARDRVLKIMRMMNPRVFILGIVNGSYSSPFFITRFKEVLFHYSSLFD MIDANVPRDNEARKMIEGGLFGQEALNIIACEGAERTERPESYKQWQARCLKAGFKQL PVDPATLKEIINMKKGIYHEDFVADEDGAWLLQGWKGRKSVKKKVTRNNPNINQPDVN KKITNFCFRSLKQCRSSIMDSPEYCQTNSNITLDYINRILMEEDIDEKISIKKGQDAL QATEKPFYDILGKAYPSSSKETAINGDSQADYPDNGSSSYHEQACSGSFVSDLLGSQD AHSITTDWSSEFDRLALQFRRGVEEAKRFIPNIEKLVDDPEKNGLYACKQTTETTEQK GKHENKIRNHPHDPHVEHIELMEARNSKHMAISTSETIRDEMFDSILLCNRQLPGEVA NLRGMMAKEASDNPKKFQSKGYGKGQRKPHSSKKKQKEAIDLSVLLIQCAQAIASNNH PFASELLRKIRHHALPDGDGSQRLANCFADGLEARLAGTGSQMYEKLMAKQTSTRDML KAYHLYFVACPFEMVTYYFSNKTIIDALEGKTTLHIVDFGILFGFQWPCLIQRLAKRE GGPPKLRITGVDVPQPGFRPHERIEETGKRLAEYANMFNVPFQYHGIASRWETICIED LSIDKDEVLIINCMSRMRKLGDETENIDSARDRVLHMMKRMNPQVFILGVVNGLYSSP FFLTRFREVLFHYSSLFDMLDNNVPRNHEARILVEKDLFGNDALNAVACEGAERIERP ESYKQWQMRILRAGFKQRPVNQAILNRSVHYKEFYHEDFVIDEDSGWLLQGWKGRIIQ ALSTWKVET</aaseq> |
| Gene Sequence |
<dnaseqindica>4636..6573#3833..3898#682..2754#1..87#atggcccatgcccctcttccttcacttctgtgtctcaaggaacctatatatgatgttgttgctgaattggaactgctgataagtaaggtgcgtgtttgtctactttaactacttgcctgttttccataattagcagacaacaatgttcttgagctcttccatcaggagcctcctgcagttcaacattcagaatgttagaaacgagtacttcaggtgtactgttgtgtaatttatgcaacacaattcaatttgttactggagaccatagttttgcttgttttcatagaagttcacaccgaatcaattataagctgaatttccaaagaaaaaaagggtgaggaaataatgcgctaactggttgcggttccctcttataaacaaccttctatggtttggggatgcaaatgttctgaattctaccaaatgagtaggctgaacataattttgagtatccgtgatcatgaagaagaattcagaatctgtctcatgcaaaacttgcttcactttcccttttacagacaacaaactgaattcatttgctgtgggacaggatatatctgtcattcagttttcaggtggcaaaaaaaaaaaaaacaaatggtgattgagcttccctttgacaatcaatacaccaccacagaaacagaacagccacatgatgggtcttcctgttcttcccagcagcaactcagcttgtacaactacagccccagcgatccgcagctgttttcccagccaaccacaggatcaagaacgtatttgtcaggtgcagtcaccatccctgggatttgcaatgacaaaagtaatcttggacaacaacaatttcagattgatgcagcgcttagtctagggtaccagaggatcagatcaagcgatgccctttgctacataagtcgggtgctgatggaggacgtcgatgagagggttgacctgcaccaaggggaggctgctcttcaggctgcagagaaacccttctatgatattcttggccaggtatatccaccatcgctaaaccggctagcactccatagcgcaaatgaaccagatacgcctgatgagagcagtagcagaaacaattatcataataggtaccatagtagccattccagtttcaacatgttacagcccttgccaaccccattgagtccatatagctatggcaggagtctttttcttccaaaccaacacttggtaagcactgcctggacttctacctttggcatccctggcttccaaattagaagaggtgccgaggaggcaaagagatttgttccaattattgataagttggtgatcgatttggacactgaccgggggctctccatttcaaaaatgaccacgaaggcaaaagtaggagacaagaaaagatatgcaatctttgagttgacagatcaaaggcacagcccttacaccacagacttggatatcttggaagggaggaacagcaaacgctatgccatcacttactgtgaaataatccggaatgatatgtttgacagggttctgctctgctatggtgtggagaatttcgccgaagcatcaaatcttcgaaaaataatgacgaagcaagcacgcaagaattcactgaatggacaaaccagaggatctgcacaacggaaattacggggtatgaaacaactcaagaaggatgtagttgatctcaggaatctcctcatccactgtgcacaagcagtagcagctgacgaccgcatttcggccagtgaactagtgaagaagataagacagcattcttcaccagatggagatagtaaccagaggttggcattttacttggtggatggtctggaggcgcgcttggctgggatcgggagccaggtgtatcgcaagctcatggcaagccgaaccagtgctgagagtttgttgaaggcttacagcctctacctttcagcttgccctttcgaaagggcgtcattcgcctatgcaaaccaaactattcttgatgcatcaaaggggcagcaaccaagaaaggtgcacattgttcatttcggcatttgcactggctttcagtggccatcattgattcagcggcttgcaaatgaagaagggggtccacccaagcttaggatcacaggtatagatatgccccagccaggtttccacccctgtgaaataattgaggagacagggaagcggttggctgattatgcaaacttgttcaaggtgccttttcaatatcagggcattgcttcacggtgggaaaccgtacaaattgaggacctgaacattgacaaggatgaagtgctcatagtcaactgtatgttcaggatgaagaatcttggtgatgagatggtatctatgaatagcgcaagggatagggtgctgaaaataatgaggatgatgaacccaagggtttttattctcggtattgtcaatggatcatacagctctcccttcttcatcacacgtttcaaagaggttctgttccattactcttcattgtttgacatgattgatgcaaatgttccacgggataacgaggcgaggaagatgatagaggggggactctttgggcaggaagcacttaacatcatagcatgcgagggtgcagaaaggactgagaggccagaaagttacaagcagtggcaagcacggtgcctcaaggctgggttcaagcagctccctgtcgatccagccaccttgaaagagataataaatatgaagaaagggatttaccatgaggactttgtagctgatgaagatggtgcctggctactacaaggatggaaagggagagtaatttatgccatatccacatggaagccaaatgaatcatatttggatcagtaagattcaaacagtttttcatgtacatatgctatggtgctcaaaggtgtataggcaactgccaatctctgtatctacttgaacagtcgtaaacacaataaatgaacatatatgtatcctttatatgtattgatttgattgtacatgagcatatatagaaactaaactaaacgaagtgtataacatactttttttatacctttgaaggaggtaccagtccttccatctcaacaatatgtactatttgaaagttcaaggttcctccctaaggaccatactaaaagtcttcttgttttatttcagaacaaagtgtaaatgtgtaatagaaaactactctagtagtgaaactgttgttttctaaaaccaatgtgtctatcccttgttctttcatgcataataggttgtaatagtgcaacatctaagtgcatgtgaatggggaagcaaaaataataattttaaatacctgagaaggagacaaaaaaagctgcaagcaatgaatagctggaatcatacagcttaaacaagagactgtttgtgctccagtgacatgcaattgttctttccatctattagcaaactatttggctggaaacaactacttcattgtataccagtaaattattcttggaagtacaatttctagattatattcataacttttagttctcatattctcatattttttttactcctaagttagattactgattgtattctaaatttccaatggccggttactgtttaacgtgggattagagtaaatagcacaatacgttaaatagttagacaataactttagaatttccagtttacttatcattttcctgggcacatgatgtccttttatcagttgtcacatccttctctttggttataattgggggcatctatgtgtccaaactgaaccaaaaggcccagcctggatgaatgacaatggtgcctagtttgtaacagaaatgatcacaagaaagccatttggaatatgatctgttaccttcatgtcacagttatatgttttataaatcagaaaagtgtcaagaagaaggttacaagaaataaccctaatattaatcagccagatgtcaacaagaaagtaacaagaaataaagaccaagaggaacattaaacaattttcacatcaacaagaaaagctcacccatcagcacaactaaggagcctcagcccctctcataaggactggacaatgccactactctcaatggctcaaaataaagtccccagtttttcacctccctccttcctcaccataggccagatacatcattaagctaggtaaatactgatgtaatctctcttgctgctgttaacaattggtaacagcagtaatagtagtatacatcataaaaagtatatttgggatatattctacagtgtagttggtataccaagttaccaactcctacattttgatacaccaacattttttctcaacaaaaggtgtcttccagagtttggaggttatccatgtcaaaagtatgatttacatagcaggtaagtagtgcatacaatcttcaaaattgggtgccagagatggttttacatgtcagtttatctaggcaaaaaactatgttttgctgattacagtcctgggaggtaccagtacctccgaattttaatgttttcattcatattggcaactcctgttgttaattagcgtggcacctctcaggaccataaaagaactcttgaacttatcctattatcctatctatgacttattttgatattttagcaagttttgagaggcaaaaaaaaaagacattggctggtaaagaaacccttctaaaaggttgacttgctcttttgtagatcacaaatttctgcttcagaagcttaaagcaatgcaggtctagcataatggacagccctgagtattgtcagaccaactcaaacataactcttgattatataaacagaatattgatggaggaggatattgatgaaaagatcagcataaaaaaaggacaggatgcacttcaggcgacagagaagcccttctatgatattcttgggaaggcatacccatcttcatctaaggagacagcaattaacggtgacagtcaagcagattaccctgataatggtagcagcagttatcatgaacaggcatgtagtggtagctttgttagtgatctccttgggtcacaggatgcgcattcgataaccaccgactggtcttctgaatttgaccgtttggctttgcaattcaggagaggtgttgaggaagcaaagaggttcattccaaatattgaaaagttggtggatgatccagagaagaatggtctttatgcttgcaaacaaacaacagagacaacagaacagaagggcaagcatgagaacaaaataaggaatcatcctcatgatcctcatgttgagcacatagagttgatggaagcaaggaacagtaagcatatggccatctccactagtgaaacaatacgggatgaaatgtttgatagtattctgctctgcaataggcagctccctggtgaagttgctaaccttagaggaatgatggcaaaagaagcaagcgacaacccaaagaaatttcaaagcaaaggatatggaaaagggcaaaggaagccacacagtagtaagaagaaacagaaagaggcaatagatctcagtgttcttctcatccaatgtgcacaagcgatagcatctaacaaccatccctttgctagtgagctactgaggaaaataaggcatcacgctttgccagatggagatggttctcagaggctagcaaactgctttgcagatggcctcgaggctcgcttggctgggactgggagtcaaatgtacgaaaaactgatggcgaaacaaacgagcaccagagacatgctaaaggcctatcatctatattttgtagcatgcccttttgagatggtaacatactacttctccaacaaaaccatcattgatgcattggaggggaaaacaacattgcatatcgttgattttggcatcctcttcggctttcagtggccatgtctaattcagcgacttgcaaagcgagaaggtggcccccctaagcttcgtatcacaggtgtagatgtaccccagcctggttttcgccctcatgaaaggattgaggagactggaaagcggttggcagagtatgcaaatatgttcaacgtacctttccagtatcatggcattgcttcaagatgggaaactatctgcatcgaggatctcagtattgacaaggatgaggtactcataatcaactgcatgtcacgaatgagaaagctaggtgatgagacagaaaacattgatagtgcaagggatagggtactacacatgatgaagaggatgaacccgcaggttttcattcttggtgttgtgaatggattgtacagctccccattctttctgactagattcagagaggttttattccattactcatcactttttgatatgctcgacaacaatgttcctaggaaccatgaagcaaggatattggtagagaaggatctctttgggaatgatgcacttaatgctgtagcatgcgaaggtgcagaaaggattgagaggccagaaagctacaaacagtggcaaatgaggatcctcagggctgggttcaagcaacgtcctgttaatcaagccattctgaatagatcagtacattacaaggaattttatcatgaagactttgtaattgatgaagatagtggctggctgctgcagggatggaaggggaggataatacaggcactgtcaacatggaaagtggaaacctag</dnaseqindica> 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| External Link(s) |
