Os03g0154000

From RiceWiki
Revision as of 19:28, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0154000

Description

Aromatic-ring hydroxylase family protein

Version

NM_001055536.1 GI:115450800 GeneID:4331659

Length

2550 bp

Definition

Oryza sativa Japonica Group Os03g0154000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2940082..2942631

Sequence Coding Region

2940154..2940239,2940323..2940469,2941156..2941224,2941307..2941472,2941549..2941777
,2941884..2942437

Expression

GEO Profiles:Os03g0154000

Genome Context

<gbrowseImage1> name=NC_008396:2940082..2942631 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2940082..2942631 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcaagaacaggcagacggccgggagatcgtcatcgccggcgccggcctcgccgggctcgcagtggccctcggactgcacaggaaaggactgaggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacatggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgaggagccagcaccagcagatccagaggttgaatgtcatgtcttcagctactggagaaatagtgcaagaaattgatctgagggcgcaaggcaaacggggaacccatgaggcacgctgcgtgagccgcaccgcgctgctactggcgttggaggaagagctcccaagaggcaccatccgctactcctccaagatcgtctcgatcgaggaagacggcaacgccaagatcctccatctgtctgacggatcgactctcagagcaaaggtgctgatcgggtgcgacgggatcaactcggtggtggcgagatggctggggctcgcgaagccgtcggactcggggcacacggccacgcgcggacgcgccaagtacccggacggccatggcttcgagcccaggtttctgcagttggtcggccagggattccgtgcaggcatggtgccctgcaacgacaccgacgtctactggttcttcacgtggtctccttccccagatgataaggatgtcgacaagagttcagccgcgacgaagcagttcgtgctgacaaagctccggagcacgaacgtgccaccacaggtgctcgaggcggtcgagcggagcgagatgaacgacgtgctcgcggcgccgctgcggttccgatcgccgctgtcgctcccgttcgcgagcatcagcaaggggaacgtgtgcgtcgccggcgacgcgctccacccgacgacgccggacctggcgcagggcgcgtgcacggcgctggaggacgccgtcgtcctggcgaggtgcctcggcgaggcgctgctgctccgtaccggcgactgcgccgccgaggagagtcaccgggtcgtcgaggccgcgctgcgccggtacgcggacgcccggcggtggaggagtgcgcagctgaccggtgcgtcgtacgcggtggggttcgtgcagcagagcgaccaccccgccgtgggcttcctgcgtgacaagctgttgtccggggtgctcgccaagacgctgctcatgatgcccgactacgattgcggcacgctctcgagttccggtgcttgttga</cdnaseq>

Protein Sequence

<aaseq>MQQEQADGREIVIAGAGLAGLAVALGLHRKGLRSVVLESSPTLR TSGLAFITWTNAFRALDALGVGDKMRSQHQQIQRLNVMSSATGEIVQEIDLRAQGKRG THEARCVSRTALLLALEEELPRGTIRYSSKIVSIEEDGNAKILHLSDGSTLRAKVLIG CDGINSVVARWLGLAKPSDSGHTATRGRAKYPDGHGFEPRFLQLVGQGFRAGMVPCND TDVYWFFTWSPSPDDKDVDKSSAATKQFVLTKLRSTNVPPQVLEAVERSEMNDVLAAP LRFRSPLSLPFASISKGNVCVAGDALHPTTPDLAQGACTALEDAVVLARCLGEALLLR TGDCAAEESHRVVEAALRRYADARRWRSAQLTGASYAVGFVQQSDHPAVGFLRDKLLS GVLAKTLLMMPDYDCGTLSSSGAC</aaseq>

Gene Sequence

<dnaseqindica>73..158#242..388#1075..1143#1226..1391#1468..1696#1803..2356#gctcacagcatttattctcatctctttcctgcagccaagtcagtttgcattcgcacaaagccagttgcaagcatgcagcaagaacaggcagacggccgggagatcgtcatcgccggcgccggcctcgccgggctcgcagtggccctcggactgcacaggtacacaaccttttttgcttctgagtgcctagcgacgtgttccaactccatgggagccgatcgaagtgcggcactgcgtgcaggaaaggactgaggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacatggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgaggagccagcaccagcagatccagaggtatgtaacagattcagaggcagtaggagactctgagtcactgagatcttgacctccaggtcagagtacagtagtactaacttttttctcctgccactttatcattatctgaatgtgtgagggcaagttttatgatagagatagtggtcacatctaattttgtctaaatcatctacacattaatttagatgtaatacatacaatagattgcatctacttacactacacccaaccaatcaacttatctctttttctctcatttcttgaaattggtgtggaggttgccccttgcatgagaggtggctgctcccctctctcttctcttctctccacatcatcatataagtctacatgacttcttgaaattagtgataaggggctcatagtacttgccctgaggccttgggttgactcagcagggtgaccgaggtcctaaagtagaagtcctaactcctaaggcctcgtttagttacaaacgttttcttcgaacttctaatttttccatcacatcaaaattttcatacacacaaacttccaacttttccgtcacatcgtttcaatttcaaccaaatttctaattttagcgtgaactaaacacacactaactgtaactgttactgtatgtctgtatcatacggtgtacagtacggataagcctgattttttctctccatgtttgttcttaggttgaatgtcatgtcttcagctactggagaaatagtgcaagaaattgatctgagggcgcaaggcaaacggtgagaactgagaagatatatctgtctactccccttcccccctgtcgtgtgatgcgcacacctgaaaacacctgtgacgcaggggaacccatgaggcacgctgcgtgagccgcaccgcgctgctactggcgttggaggaagagctcccaagaggcaccatccgctactcctccaagatcgtctcgatcgaggaagacggcaacgccaagatcctccatctgtctgacggatcgactctcagagcaaaggtaaaaacacatggcgtgcgtgctgtctctgtcgatcgatcggttgctgaggaggagatggtggcgatggatgcaggtgctgatcgggtgcgacgggatcaactcggtggtggcgagatggctggggctcgcgaagccgtcggactcggggcacacggccacgcgcggacgcgccaagtacccggacggccatggcttcgagcccaggtttctgcagttggtcggccagggattccgtgcaggcatggtgccctgcaacgacaccgacgtctactggttcttcacgtggtctccttccccagatggtcagtcacctgagctgccaagatccaagtgtcgaacactcgatcggctgcaaggaggacatgaacactgaatcgtattactgattaatgccgtgtcttttgacagataaggatgtcgacaagagttcagccgcgacgaagcagttcgtgctgacaaagctccggagcacgaacgtgccaccacaggtgctcgaggcggtcgagcggagcgagatgaacgacgtgctcgcggcgccgctgcggttccgatcgccgctgtcgctcccgttcgcgagcatcagcaaggggaacgtgtgcgtcgccggcgacgcgctccacccgacgacgccggacctggcgcagggcgcgtgcacggcgctggaggacgccgtcgtcctggcgaggtgcctcggcgaggcgctgctgctccgtaccggcgactgcgccgccgaggagagtcaccgggtcgtcgaggccgcgctgcgccggtacgcggacgcccggcggtggaggagtgcgcagctgaccggtgcgtcgtacgcggtggggttcgtgcagcagagcgaccaccccgccgtgggcttcctgcgtgacaagctgttgtccggggtgctcgccaagacgctgctcatgatgcccgactacgattgcggcacgctctcgagttccggtgcttgttgacgtgatttgggttttggccgccgcccagctgcaagtctgcaacctgtaatcatatcgtcgtgctgtttgtgatgtttgtctgtatgtgctccgtctgttttactgttccgtcacgtgtcaatgatcccaaacctgtgaaacgctcctttttgtgtgcagaaaaataaagtcgagtgcatttgggtttttggtcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0154000, RefSeq:Os03g0154000