Os05g0110500

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Gene Name

Os05g0110500

Description

Similar to RNA helicase (Fragment)

Version

NM_001060975.1 GI:115461680 GeneID:4337589

Length

3528 bp

Definition

Oryza sativa Japonica Group Os05g0110500, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:540968..544495

Sequence Coding Region

541004..541121,541374..541446,541539..541648,541787..541930,542015..542123
,542223..542569,542647..542720,542865..543169,543555..543801
,543976..544224

Expression

GEO Profiles:Os05g0110500

Genome Context

<gbrowseImage1> name=NC_008398:540968..544495 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:540968..544495 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagaagctcggcaagtcgccggtggcgaaggaggaggacaaggaggggctcttcgcgtcatgctccttcaccgacctcggcctccaccccaccctctgcgctcacctccaagataagatgggcttccaagcgccaacaagaatccaagctcaggcaattccagtcgccatgtctggacaacacatgctagtgaaggcagcaactggtactggcaagactcttgcgtaccttgcaccaattgttcaccttctccagatgagggagcctcgtgttgagagaactgatggaacttttgctctggtacttgtaccaacacgggagctatgcctacaagtttatgggattgcacagcagttggtgcatcgtttccactggcttgtccctggttacataatgggtggtgagaacagagcaaaagaaaaggcaagattgcgaaaaggaatatcaattctaattgctactcctgggcgtcttctggaccacttacaacatacgtcatcatttgtctacccaaatatgcgttggatagtttttgatgaagctgacagcattcttgaacttggttttgggaaagcactagaggatatactagagcacttgggttcaaggaatgatacttctaaccaaaataaaaacaaaatggaacctatgaaaaggcaaaaccttctgttatctgcaactctcaatgaaaaggtgaatcggttagccaagattagtttgaagaaccctgtgatgattggtcttgacgaacagaactccagtgcccatgggaagaaccacacttctctattatctgatgatgaagaggaaatactggaaaagcacaacgttacagtggaacaagcagttgacgatttcaagcttcctgcacagcttgttcaaagatatgttaaagtttcatgtggttcaaggctcgcgattcttcttaccattcttaaatctctgtttgaaagacaactgtctcataaggttgttgttttcctgtcaacatgtgactctgtagatttccaccatacagtactcagccagcttgagtggagccctggcctgcaactggatacggataagaagcaaaagtttattagctgcaaagtgttccgtttacatgggaatatggaccaggatgatcgcaagaaatcatttctgggattcagttctgagaaatctgcaattcttgtatctactgatgttgctgctaggggcttggactttccaaaagttaaatgtatcatacagtatgattcacctggggaggcttctgaatatgttcacagggttggaagaactgcaaggattggtgaaaagggggaggctctcctgtttctccaacctattgaaaccgactacttgagagatctagagctacatggtgcatcacttacagaataccccctccaaaaggttttagacagttttcctgtaaatggacagaggcttcacaaaaggaagcaaatatctttagatatgcatccatggataatgtctttacagagagcattggaaagttttgtcacatccgaggacacgacgaagaagcttgcaagagatgccttctgttcttgggtgcgcgcctacactgcccaccgaggtgaactgaagaagatttttatggtcaagaagctccatttggggcatgtagctagaagctttgggttgaaggagcaaccctccttgttgggaaggtcacaccaggtgcaactcaagaagaggaagaaagaacagaagcgcgaaaggcctgcaaaaaggaggaaaatcccggccaagagatga</cdnaseq>

Protein Sequence

<aaseq>MAKKLGKSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGF QAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFAL VLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRL LDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEP MKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTSLLSDDEEEILEK HNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCD SVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSA ILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETD YLRDLELHGASLTEYPLQKVLDSFPVNGQRLHKRKQISLDMHPWIMSLQRALESFVTS EDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLLGRSHQ VQLKKRKKEQKRERPAKRRKIPAKR</aaseq>

Gene Sequence

<dnaseqindica>37..154#407..479#572..681#820..963#1048..1156#1256..1602#1680..1753#1898..2202#2588..2834#3009..3257#gctgcgccgccccaactccggcgccgcaacaaagccatggccaagaagctcggcaagtcgccggtggcgaaggaggaggacaaggaggggctcttcgcgtcatgctccttcaccgacctcggcctccaccccaccctctgcgctcacctccaaggtagtttttccccttcgacaagccatggctggttggttcttggatcgaatttagagcagaccattaccgagttgatgtcaaaattttactattctccgacgcctctgactgattttattttgttatctcgtccaacttccgtgacaagtttcacagcatgctagcatagggtttatgaacggaaatgaagatatatatattctttttattatagcttggtaatcaaacactttggtcgtctctttgatttagataagatgggcttccaagcgccaacaagaatccaagctcaggcaattccagtcgccatgtctggacaacacatgtatatgctcctttttcacaataccataactcctttgattcagagacttcttttttttatttacattttgttttttggactgtcaattgcaggctagtgaaggcagcaactggtactggcaagactcttgcgtaccttgcaccaattgttcaccttctccagatgagggagcctcgtgttgagagaactgatggaacttttggtaacaataacttcttgtgatctgcttatgtttcttttcatgcattctttcattacctatgtttttcgtatatccaccatccatttgtaaaactttttctagctgtggagactaaccctttgctaactcttttgatagctctggtacttgtaccaacacgggagctatgcctacaagtttatgggattgcacagcagttggtgcatcgtttccactggcttgtccctggttacataatgggtggtgagaacagagcaaaagaaaaggcaagattgcgaaaaggtatatcttgttcaaggacatattttgtatctcattaaatatacttttatatagcatcatatattgaggacatgtttattgcaggaatatcaattctaattgctactcctgggcgtcttctggaccacttacaacatacgtcatcatttgtctacccaaatatgcgttggatagtttttgatgaagctgacaggtctgatagccatacattcattactcggtttaccctatttcttagaaggtttttaagtgaacataactctttatgttattggtgctcatattcttgcagcattcttgaacttggttttgggaaagcactagaggatatactagagcacttgggttcaaggaatgatacttctaaccaaaataaaaacaaaatggaacctatgaaaaggcaaaaccttctgttatctgcaactctcaatgaaaaggtgaatcggttagccaagattagtttgaagaaccctgtgatgattggtcttgacgaacagaactccagtgcccatgggaagaaccacacttctctattatctgatgatgaagaggaaatactggaaaagcacaacgttacagtggaacaagcagttgacgatttcaagcttcctgcacagcttgttcaaagatatgttaaaggtagcagaaaattgcctccttatatcattttaagtcatgttttccctttgctcacttagtttttatatttcattcagtttcatgtggttcaaggctcgcgattcttcttaccattcttaaatctctgtttgaaagacaactgtctcataaggtaaattctctatatccagaccagaagctgcttcggtttcactatgttgtaacttttccacttcaagttttgcttgccaccaataaatactaaaagtcatgtgagttaaactattctgcgtttgtttgtgtcttctttttgcaggttgttgttttcctgtcaacatgtgactctgtagatttccaccatacagtactcagccagcttgagtggagccctggcctgcaactggatacggataagaagcaaaagtttattagctgcaaagtgttccgtttacatgggaatatggaccaggatgatcgcaagaaatcatttctgggattcagttctgagaaatctgcaattcttgtatctactgatgttgctgctaggggcttggactttccaaaagttaaatgtatcatacagtatgattcacctggggaggcttctgaatatgttcacaggtacctgaagcatctccctgtctaaaacatttatttgtaggtttctgatttattgtttccaacatagttataattgtattatttgattgtatacgaacagacaaaatgtattgttgcagactaaagcactttactctttacctggttcctttttatgtggtagtattgttcattgatttcctgttacatgagactgtttttgtcaaaactctgcaaagtttttagtcttttgagtgctattctgtcatgtaatttcttgtgaagatgttaaggcatttgatgtaagctaagctatagagacactttctcttgtgcttcccttttgctatttatgttcttttttttgtttatttcaagtatcagcaactttattcgtttattttagggttggaagaactgcaaggattggtgaaaagggggaggctctcctgtttctccaacctattgaaaccgactacttgagagatctagagctacatggtgcatcacttacagaataccccctccaaaaggttttagacagttttcctgtaaatggacagaggcttcacaaaaggaagcaaatatctttagatatgcatccatggataatgtctttacagagagcattggaaagttttgtcacatccgaggtaatgtatagaacacattttcgttctgtttcttggtatcatatttggctactcatgcacaatgagataaatagtgcacaaatatgattccgttgatcgtctattgtgaataccatgagcttttgaccttttgctgatcttagcaaatgcattgtcatgtgtcctcttatccaggacacgacgaagaagcttgcaagagatgccttctgttcttgggtgcgcgcctacactgcccaccgaggtgaactgaagaagatttttatggtcaagaagctccatttggggcatgtagctagaagctttgggttgaaggagcaaccctccttgttgggaaggtcacaccaggtgcaactcaagaagaggaagaaagaacagaagcgcgaaaggcctgcaaaaaggaggaaaatcccggccaagagatgaatctccatagcagaaatgcttgtaactcgaaaactaatggtggatcatgatccactccaattttgtggaactaacagccgcagcttgaaggtgaaaacattgaccccatgaagctttcatgttttggccagaagcctagagaagagctagtgtactgcctgtaatctgaaatgtatcaaaagacacagaatgttttgctcagtttgggattatctactgctctgctagttacccattttaatcagaaatataatccatgtgtttcttcctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0110500, RefSeq:Os05g0110500

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