Os05g0110900

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Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0110900| Description = Similar to Protein kinase APK1B, chloroplast precursor (EC 2.7.1.-)| Version = NM_001060979.1 GI:115461688 GeneID:433...")
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Gene Name

Os05g0110900

Description

Similar to Protein kinase APK1B, chloroplast precursor (EC 2.7.1.-)

Version

NM_001060979.1 GI:115461688 GeneID:4337593

Length

3215 bp

Definition

Oryza sativa Japonica Group Os05g0110900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:555224..558438

Sequence Coding Region

555521..555939,556142..556265,556347..556489,556579..556714,556791..557089
,557821..557887

Expression

GEO Profiles:Os05g0110900

Genome Context

<gbrowseImage1> name=NC_008398:555224..558438 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:555224..558438 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaattgctggggcgccaagatcagctcggagagcccttgccgcagcgcctcctccccttctggggggacatccaagtatgctagcaactccagtgtgtctgcagcctcggtgccgccaacaccacggagcgaggatgagatcctggaggcagcaaatgtcaaggcctttgccttcaatgagctgaggactgccaccagaaacttccggccagacagtgtgcttggtgagggaggctttggatcagtcttcaaagggtggatcgatgagaagacgctcgcaccaactaagccaggcacagggatggtcattgctgtaaagaagttgaatcaggaaggccaccagggtcacagggaatggctggctgaagtgaattatcttggacagttgtcacacccatatcttgtaaggctcgttgggtactgcgtcgaagatgagcagcgtcttcttgtttatgagttcatgccacgtggtagcttggaaaatcatcttttcaggaggagtacgcattttcagccgctctcctggaaccttcggatgaaaattgcccttggagcagcaaaagggctcgcatttctccacagtgacaaggttaaagtcatctaccgtgatttcaagacctctaatgtccttttggatgcgaactatgatgcaaagctctctgattttgggctggcaaaggatggaccgactggtgacaagagccatgtctccacaagggtgatggggacttatggatatgctgcaccagaataccttgcaacaggccatctgaccaccaagagcgacgtctatagctttggagttgtgctgctagagatgctatcaggacgacgagcactggacaagaaccgcccaaccggggagcacaatctggtggagtgggctaggccatacctgatgagcaagcggcgcatcttccgcatcctggacgcccggttgggcgggcagtactcccttgccaaggcccagaaggctgcaacactggcacttcaatgcatctctgtggaggccaagaacaggcctaacatggagcaggttgttgctgtattagaacagctccaggattccaaggagacaggggcaaatcctcagctgcagaagaagtccagcagcaagaacgcaggcagcaatggatcgaaaccgtcatcgaaggggaagcccgcaaatgcgaggctggtttaa</cdnaseq>

Protein Sequence

<aaseq>MGNCWGAKISSESPCRSASSPSGGTSKYASNSSVSAASVPPTPR SEDEILEAANVKAFAFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTG MVIAVKKLNQEGHQGHREWLAEVNYLGQLSHPYLVRLVGYCVEDEQRLLVYEFMPRGS LENHLFRRSTHFQPLSWNLRMKIALGAAKGLAFLHSDKVKVIYRDFKTSNVLLDANYD AKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTTKSDVYSFGVVLLEML SGRRALDKNRPTGEHNLVEWARPYLMSKRRIFRILDARLGGQYSLAKAQKAATLALQC ISVEAKNRPNMEQVVAVLEQLQDSKETGANPQLQKKSSSKNAGSNGSKPSSKGKPANA RLV</aaseq>

Gene Sequence

<dnaseqindica>2500..2918#2174..2297#1950..2092#1725..1860#1350..1648#552..618#gagtagaattctagaagaaggagaaagaaatcgaaaggcagcagctgatggttgcatgctgtgcgtcgctctcatgctcaaaaggtcaacagagttgagtccctcagctaaggcaggcaagcacgagagtcacagatacatatcccctttaatctcctctcccaccaatcctttgatccattcatcccaacttcttccatagtacaaatctcttgctcccctccctctcatctcctatctgtatctatttctatctctctatctcgtatctccttgaagaagaacagagagaggattgggaggagtagtaggtagttgatttagttttgaggagccggagaggagagcaggtgtcctggttcgtgattcgatttcagctgttctgatcgcttcttgtggcttctgtgccgtgctggcctctcgttcttgagcctttgtcgattcgattcccgcgaaaaggaggcgtctttttgtgagttaggtgtggtgcttcttgggctctactacctccgaggtgaaggtgttgttgttggtggtggtggattttcgccatggggaattgctggggcgccaagatcagctcggagagcccttgccgcagcgcctcctccccttctggtgcgtctcacctttctcctctcttcttccttcctccatatagcatttcttactatggtgattagaatctagacatgtatgctatgtttattcctttttttttcctttagttttttttttaaaaaaaatttctgaagtatccaatcaatcagtcatatctctgtgttgggaattttgtgatttgtgtaattgtgtctgacttgtgtgttactagtataggactataggttatgttaatttaatcccctttttaatggcttcctacaggctgtttagggtcaccaatcacatgccttgtctcctagcactggtagtgcgtgcgtataagttctagtttgagctcttcttggatttgtttcatgcgtaaagctcaattcttctccttctccagactaggagtaggaaaggaagcttccaatggaaacgcacatataactttatctgacttttcctttgttgctagtatttgttcgttccaagtgcagaagctcaaatcaggctaagtggaaaattctaattttggtgctactttctaccaaaatctgcgtgcttttttttcaatgttattgactgtattatgcagaaagttcaatacttttggtgcaacctcttaacttatctgtgaagtttttgccttttaatacccaaaccaagcaaagaaacaacaacttgatcaggctaaaatctaatggaccacggcctgaaaatttgtactgtcttctgttgtttaggggggacatccaagtatgctagcaactccagtgtgtctgcagcctcggtgccgccaacaccacggagcgaggatgagatcctggaggcagcaaatgtcaaggcctttgccttcaatgagctgaggactgccaccagaaacttccggccagacagtgtgcttggtgagggaggctttggatcagtcttcaaagggtggatcgatgagaagacgctcgcaccaactaagccaggcacagggatggtcattgctgtaaagaagttgaatcaggaaggccaccagggtcacagggaatggctggttagtacccactggctgattctttcctgtcaagtttgcactgtgtatgacattatcttcctttcaatttgtgcaggctgaagtgaattatcttggacagttgtcacacccatatcttgtaaggctcgttgggtactgcgtcgaagatgagcagcgtcttcttgtttatgagttcatgccacgtggtagcttggaaaatcatcttttcaggagtaagtagtttttttttgtactttcctagttgctagcttctgatttacaatttggaatacaacatgctaaaatgtgttgtaaaatgcagggagtacgcattttcagccgctctcctggaaccttcggatgaaaattgcccttggagcagcaaaagggctcgcatttctccacagtgacaaggttaaagtcatctaccgtgatttcaagacctctaatgtccttttggatgcggtacggagtcctcagaactattatcctttgtgttcacaagatagcttaactggtgatctgatagacagactgtattttcagaactatgatgcaaagctctctgattttgggctggcaaaggatggaccgactggtgacaagagccatgtctccacaagggtgatggggacttatggatatgctgcaccagaataccttgcaacaggtagcatattacttccatgttctgaatcctagaatgtaatcatttcatcacaatgaatgaacatgcacgacaaagatttgagcttcattacacatcgtgtttactgtcaatctatggttcccttgctggcatctgggtgccaaacatagagtgatttggctattattgaattaactgacacatttctctgtatgttgtgaaggccatctgaccaccaagagcgacgtctatagctttggagttgtgctgctagagatgctatcaggacgacgagcactggacaagaaccgcccaaccggggagcacaatctggtggagtgggctaggccatacctgatgagcaagcggcgcatcttccgcatcctggacgcccggttgggcgggcagtactcccttgccaaggcccagaaggctgcaacactggcacttcaatgcatctctgtggaggccaagaacaggcctaacatggagcaggttgttgctgtattagaacagctccaggattccaaggagacaggggcaaatcctcagctgcagaagaagtccagcagcaagaacgcaggcagcaatggatcgaaaccgtcatcgaaggggaagcccgcaaatgcgaggctggtttaagtgaacaatcatatatcatatgatcagatatagatctgttgagatgagtagtgtaggctcttagagggacctgtaaagaagaggagagttgtgaatccttggtgcttgcctgttttagttgtttttgcagcttctagtcagagtcttgtctgaagtaaaaagtatgtggtcgcctatatctgcatgcattcagttcagtgcattgtggattgtacagtttatatctagttctaatgctgcgaaatttttgttcgaggcaacagatgtgcccagatccagtttttcctgatttttaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0110900, RefSeq:Os05g0110900