Os05g0111100

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Revision as of 10:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0111100| Description = Zinc finger, Tim10/DDP-type family protein| Version = NM_001187246.1 GI:297723622 GeneID:9271541| Length = 646 bp| ...")
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Gene Name

Os05g0111100

Description

Zinc finger, Tim10/DDP-type family protein

Version

NM_001187246.1 GI:297723622 GeneID:9271541

Length

646 bp

Definition

Oryza sativa Japonica Group Os05g0111100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:577172..577817

Sequence Coding Region

577402..577591,577673..577770

Expression

GEO Profiles:Os05g0111100

Genome Context

<gbrowseImage1> name=NC_008398:577172..577817 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:577172..577817 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgccgccgccatggccgccggcggcggggaggaggaggaggacaaggcgcgcatggaggccgtcgccgacaagctccagacccgagacgcgatacggctgtacaactgggtgtcgcaccggtgcttctccgactgcgtcaccaccttctaccggcgaaccctcggcaagaaggaggaggactgcgtcaggtcctgcgtccgcaagttcctcctcctctcctccgcctccgccgcccgcttcgcccacctcgccgacccctcatccgccttcgacgactga</cdnaseq>

Protein Sequence

<aaseq>MDAAAAMAAGGGEEEEDKARMEAVADKLQTRDAIRLYNWVSHRC FSDCVTTFYRRTLGKKEEDCVRSCVRKFLLLSSASAARFAHLADPSSAFDD</aaseq>

Gene Sequence

<dnaseqindica>227..416#48..145#tccttctccttcttcttcttcttcttgtgctgctactgaagaagagcatggacgccgccgccgccatggccgccggcggcggggaggaggaggaggacaaggcgcgcatggaggccgtcgccgacaagctccagacccgagacgcgtacgtttaatctcttactttccttcccttcctcctcgcagagagagtggagtagcgatggatggatttttgtgcacgcaggatacggctgtacaactgggtgtcgcaccggtgcttctccgactgcgtcaccaccttctaccggcgaaccctcggcaagaaggaggaggactgcgtcaggtcctgcgtccgcaagttcctcctcctctcctccgcctccgccgcccgcttcgcccacctcgccgacccctcatccgccttcgacgactgacctcaaccttctcccagattagattcttatactctagcttcttttcatcacatcagataggatgaatgcgcgaatccggattcattagtactgtttcagtggctggatcggagtaggggttcctttcttgctgttgctgctgtatcaaacaaatgggattttcgagctttgattacgacatatcgagagtttttttgacacaaacgaaatactagtatcaatttgatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0111100, RefSeq:Os05g0111100