Os03g0165100

From RiceWiki
Revision as of 19:28, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0165100

Description

Protein prenyltransferase domain containing protein

Version

NM_001055600.1 GI:115450928 GeneID:4331727

Length

3381 bp

Definition

Oryza sativa Japonica Group Os03g0165100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3479251..3482631

Sequence Coding Region

3479251..3479360,3479825..3479864,3480116..3480223,3480725..3480815,3480893..3482631

Expression

GEO Profiles:Os03g0165100

Genome Context

<gbrowseImage1> name=NC_008396:3479251..3482631 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3479251..3482631 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcgccgccgcggcgcctgccgtcgcgagatcgtctcctccctcctcggctcctcccccaccccgcagccgcgggtgtttgacctcctaatccgcacctacacccagtcccgcaagccccgcgaggccttcgaggcattccgcctcatcctcgaccaccgcgtccccatccccgccgccgcctccaacgccctgctcgccgccctctcccgcgccggatggccccatctcgccgcggacgcctaccgccttgtcttctcctccaactccgaggtaaacacgtacacgcttaacataatggtccacaactactgcaaagccctggagttcgacaaggttgacgctgtcatctccgagatggagaagagatgtgtctttcctgatgtggttacacataatgtgatggttgatgctagatttcgcgctggggacgcggaggcagcaatggcgttggttgactcaatggttagtaaagggctaaagcctgggattgtgacgtataattcggttctgaaagggttatgtaggagtgggatgtgggataaagcatgggaagtgttcaaagaaatggatgattttggtgttgcgcctgatgttcggagttttaccattttgattgggggattttgtagagttggggagattgaggaggcgttgaagatttacaaggagatgcggcaccgtggtattaaaccagatttggtgagctttagttgcttaattggattgtttgcaaggagggggaagatggaccatgcgatggcgtacttgagggagatgaggtgctttggattggtacccgatggtgtgatttacacaatggtaataggcggattttgtagggctgggttaatgtcagatgctctgagagttagggatgagatggttggctgtggatgtttgccagatgtggtaacttacaatactttgttgaatgggctctgtaaagagcgcaggttgttagatgcagaagggcttttgaatgagatgagggagagaggggttccaccagatttatgtaccttcacaactttgattcacgggtattgcatagagggtaaactagacaaggcgctgcaactgtttgacacaatgttgaaccagcgtttgaggccagacatagtaacatataatactttgatcgacggaatgtgcagacaaggtgatcttgacaaagccaatgatctatgggatgatatgcattctcgtgaaatcttccccaatcatgttacgtacagtatcctaatcgacagtcactgtgagaagggacaagtggaagatgcatttggttttttggatgaaatgataaataagggcattttgccaaacatcatgacatataattccatcattaagggctattgccggtctggaaatgtttcaaaggggcagaagttcttgcaaaagatgatggtcaacaaggtgtcacctgatttaattacttacaacaccctaatccatggttatatcaaagaagataagatgcacgatgcttttaagttgcttaacatgatggagaaggaaaaggttcaaccagatgttgtcacatataatatgctcataaatgggttttctgtacatggtaatgtgcaagaagctggttggatttttgagaaaatgtgtgctaaaggaattgaaccagatagatatacatacatgtctatgataaatggtcatgtcacagctggcaactcgaaggaggcattccagcttcatgatgagatgcttcaaagagggaaagagaaacgcagggctgcaggcactgtgcagtttgtgaatattcagaattctgctgaaagtctgaaacaaatgcctatggatttgaaggtaacatgttccatatacttcttcgccaagacccaggaatttgctatccggggttgtgcttttgttttcggggcactggagaaatcaagtacacctttaaattttcagggaaccagaagtttggaagatcactggaaaatcctagttggattgttaggatcattggtgcatccagatgcacctggctttgctgaagttaagaacaccgtgcttccctgtcgtggctgcgatctcgctcccagcaatctggatgcatga</cdnaseq>

Protein Sequence

<aaseq>MSRRRGACRREIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREA FEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMV HNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE ALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK EKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS KEAFQLHDEMLQRGKEKRRAAGTVQFVNIQNSAESLKQMPMDLKVTCSIYFFAKTQEF AIRGCAFVFGALEKSSTPLNFQGTRSLEDHWKILVGLLGSLVHPDAPGFAEVKNTVLP CRGCDLAPSNLDA</aaseq>

Gene Sequence

<dnaseqindica>3272..3381#2768..2807#2409..2516#1817..1907#1..1739#atgtcgcgccgccgcggcgcctgccgtcgcgagatcgtctcctccctcctcggctcctcccccaccccgcagccgcgggtgtttgacctcctaatccgcacctacacccagtcccgcaagccccgcgaggccttcgaggcattccgcctcatcctcgaccaccgcgtccccatccccgccgccgcctccaacgccctgctcgccgccctctcccgcgccggatggccccatctcgccgcggacgcctaccgccttgtcttctcctccaactccgaggtaaacacgtacacgcttaacataatggtccacaactactgcaaagccctggagttcgacaaggttgacgctgtcatctccgagatggagaagagatgtgtctttcctgatgtggttacacataatgtgatggttgatgctagatttcgcgctggggacgcggaggcagcaatggcgttggttgactcaatggttagtaaagggctaaagcctgggattgtgacgtataattcggttctgaaagggttatgtaggagtgggatgtgggataaagcatgggaagtgttcaaagaaatggatgattttggtgttgcgcctgatgttcggagttttaccattttgattgggggattttgtagagttggggagattgaggaggcgttgaagatttacaaggagatgcggcaccgtggtattaaaccagatttggtgagctttagttgcttaattggattgtttgcaaggagggggaagatggaccatgcgatggcgtacttgagggagatgaggtgctttggattggtacccgatggtgtgatttacacaatggtaataggcggattttgtagggctgggttaatgtcagatgctctgagagttagggatgagatggttggctgtggatgtttgccagatgtggtaacttacaatactttgttgaatgggctctgtaaagagcgcaggttgttagatgcagaagggcttttgaatgagatgagggagagaggggttccaccagatttatgtaccttcacaactttgattcacgggtattgcatagagggtaaactagacaaggcgctgcaactgtttgacacaatgttgaaccagcgtttgaggccagacatagtaacatataatactttgatcgacggaatgtgcagacaaggtgatcttgacaaagccaatgatctatgggatgatatgcattctcgtgaaatcttccccaatcatgttacgtacagtatcctaatcgacagtcactgtgagaagggacaagtggaagatgcatttggttttttggatgaaatgataaataagggcattttgccaaacatcatgacatataattccatcattaagggctattgccggtctggaaatgtttcaaaggggcagaagttcttgcaaaagatgatggtcaacaaggtgtcacctgatttaattacttacaacaccctaatccatggttatatcaaagaagataagatgcacgatgcttttaagttgcttaacatgatggagaaggaaaaggttcaaccagatgttgtcacatataatatgctcataaatgggttttctgtacatggtaatgtgcaagaagctggttggatttttgagaaaatgtgtgctaaaggaattgaaccagatagatatacatacatgtctatgataaatggtcatgtcacagctggcaactcgaaggaggcattccagcttcatgatgagatgcttcaaagagggtttgctcctgacgataaattctgagggtcctcattttcttctttattggattccgtagagccattggataatttaggaaagagaaacgcagggctgcaggcactgtgcagtttgtgaatattcagaattctgctgaaagtctgaaacaaatgcctatggatttgaaggtgagaaattttaatattctgcagttggcactataacatcttctagtctcttcatgccactcttctacttattgacctagtggaaccaaccatgataaatgataccaagttactattttgagtatgacttggtaagatgtaatgctatccattttctgaccagcaagaagctaaacatctactgagtattatttttctcttgacaacagtggtgcttggttgagttacttttttccttttctttttttttgcattccatccctcaataattttgtttgagatttggtaccatcacactgaggctgtgtttagttccatgctaaaattggaagtttgaagaaattggagcgatgtgatggaaaagttggaagtttgtgtgtgtagaaaagttcgatgtgacggaaaagttggaagtttgaagaaaaaagttggaatctaaacagggcgtgactgtaatttccataggctgctggttaattttgtggaagtctctcccatcaggtaacatgttccatatacttcttcgccaagacccaggaatttgctatccggggttgtgcttttgttttcggggcactggagaaatcaagtacacctttaaattttcaggtactcttcaaaccaaactcgtctctctctctctctcacacacacacacacacaccaaaaaaaaaaaactgtgcttcctcccttctatgttttgtcaagacattgtgtagtggtagtacattgtgtagtcccacagtgatctgaaccaccgtttgagatcaggaaaaggattcaatttggcaatgactgtacagtttattctcacttgtattaattacttatcttcacttcagttgtttgttcctgttcagggaaccagaagtttggaagatcactggaaaatcctagttggtgagagatattagtacacaaagcatcgtgatgtctgagatatctacatataacatacagattccataatgatctgcgaggttatttgctattactggatcttccttacgtcaaagatgtttcttttagtcatgccatgatacagacagacgagtactgcttgctaaggagtcacaatcaacagaacgtgattgatcagaaggaaacggcaagtgagttcaggaaaaggtaacattcaaaacaattataaaaaagatgtcatattgaaaacaactctgcacaaatcagggcaatcaaaacttctgtacaaaaagaacaaatgaattggctgtggagggttaaaagggctccttaagaataacctctagaagaacaggaaaagaacagaaaagaaagaaaaaaaaaatgaatattgtacatgtacatgtttcaaagctctcatggtgtttggcatcttcttccaggattgttaggatcattggtgcatccagatgcacctggctttgctgaagttaagaacaccgtgcttccctgtcgtggctgcgatctcgctcccagcaatctggatgcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0165100, RefSeq:Os03g0165100