Os03g0168000

From RiceWiki
Revision as of 19:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0168000

Description

Conserved hypothetical protein

Version

NM_001055621.1 GI:115450970 GeneID:4331750

Length

4030 bp

Definition

Oryza sativa Japonica Group Os03g0168000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3652621..3656650

Sequence Coding Region

3653177..3653340,3653493..3653562,3653663..3653859,3653958..3654033,3654343..3654426
,3654796..3654875,3654971..3655097,3655276..3655335,3655423..3655473
,3655562..3655720,3655845..3655977,3656094..3656266

Expression

GEO Profiles:Os03g0168000

Genome Context

<gbrowseImage1> name=NC_008396:3652621..3656650 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3652621..3656650 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacgcgaagggcgacgaggtgttggcggagggacagatgcctctgggacggtggccgatcctgtcctacggtgtcggccacatgctgaatgacatcacgtctgcctgctggttcacttacctgctcctcttcttgcaagaaatcgggcttgctccaagggatgcagctattgtgatgctttctggccaggttgcagatggcctaatgacgattcttgcaggcgagatgatcgaccgatttgggcacttcaagctgtggcacatcggaggatcaatcctagtcggcatctccttctcctctgtcttcggtggatgtcttctctgcaccgtcctggggaccgattcctaccttgtgagaaccattggttacagcttcttcgctgccgtcttcaacatcggctgggcggccacacaagtttcacacatgtcaatggtgaactgcatgacactgaattccacaagccgggtagccttagcaagctgcagaaatgcgttcactatggtggcaaatcttggtttatatgcgatagctttggttgtatttgctttagtgagcgcgaaggcatgctcagacattgttcttcagtaccgttggatagcgtacgtttcaatttttgtgggatgctgcttcctagtggtgttctatgctggaacaaaggagccgactttgcagtcgggatctgactgcaagaaatcggctaggatttcctggggctactggttcaagaaggccttgtactaccaagtcgctctgttgtatatgcttgcaagattgatcacaaatgtctctcagtctctcatcgcgttctacgtcactagagacttgaagatgaatgagtactccaaagcgattataccagccatcatattttgctgcagcttcctcgtctctgttgttctccaggagataaagtggaacagccgccgcctgaagtcgctcctcaccatcggagcaatactctgggtgatcgctggagccgccgtcttcgtcctcccgagtcagatgcacaaccttatgtaccctctcgctatggtcatcggagctgcaaacgccctcgtcatggtgaccacaattgggctagagagcgcgctggtaggagacgacttgaacggctgcgccttcgtctacggctcgctcagcttcctggacaagatgtcgtgtggaatcgccttgtttgttctagaatcatacgaagattcgattagctgcggcgagacgagggggctgtacacggtgagcaggtttgggacaggtctgatcccctcgtgctttgcagtcttcgcgctgctggtcacctcaaccctgaagctccaggacaccaacccgagagctgccgccgctgcactggaagctccactcctcgtctga</cdnaseq>

Protein Sequence

<aaseq>MADAKGDEVLAEGQMPLGRWPILSYGVGHMLNDITSACWFTYLL LFLQEIGLAPRDAAIVMLSGQVADGLMTILAGEMIDRFGHFKLWHIGGSILVGISFSS VFGGCLLCTVLGTDSYLVRTIGYSFFAAVFNIGWAATQVSHMSMVNCMTLNSTSRVAL ASCRNAFTMVANLGLYAIALVVFALVSAKACSDIVLQYRWIAYVSIFVGCCFLVVFYA GTKEPTLQSGSDCKKSARISWGYWFKKALYYQVALLYMLARLITNVSQSLIAFYVTRD LKMNEYSKAIIPAIIFCCSFLVSVVLQEIKWNSRRLKSLLTIGAILWVIAGAAVFVLP SQMHNLMYPLAMVIGAANALVMVTTIGLESALVGDDLNGCAFVYGSLSFLDKMSCGIA LFVLESYEDSISCGETRGLYTVSRFGTGLIPSCFAVFALLVTSTLKLQDTNPRAAAAA LEAPLLV</aaseq>

Gene Sequence

<dnaseqindica>557..720#873..942#1043..1239#1338..1413#1723..1806#2176..2255#2351..2477#2656..2715#2803..2853#2942..3100#3225..3357#3474..3646#gtcccgcgctctctcctcccctcctcgacgaacagcaagcgcgcgcgctctcatctcggtacgcgtgcgaaattcgcgaatgagattctgaaattccctcccgattctcgcattccttttgctgctgttgccgccggcgtcgccgtgccgcgggttcatatgcattgccgtttttcttggggggattttacgacggcggccgcggcgcggcaacgtgtagccctagcgcggctagcgcgggcgcaggacggcggcgagttgagcggaggggacgcggctgcacgcgcggcgcggggcggcacgcgtcgctcgcgtgcggtgatcccgcgcgcgcgcggcggcgccggctggcgtgaacgcaagcttacgcatgatcgccatcaaataaaagtcgctttttcctttttgtcatgcatctcatgaggcgtggaattattccctgtctgttgctaatgtgtgcaatcacctctgcatattcagagatcgtagctgaagattacacattgggaaactggtgtactgcctgcctctgcgatcgatcgatcgatcgatcgccatggctgacgcgaagggcgacgaggtgttggcggagggacagatgcctctgggacggtggccgatcctgtcctacggtgtcggccacatgctgaatgacatcacgtctgcctgctggttcacttacctgctcctcttcttgcaagaaatcgggcttgctccaaggtaatcattgctaattaattaattaaacccacgtagacaacagctcacaatcacactagtggtctgtgtggaatttcgatttgtctgaagcaaagtaatgttgctgcagcagctcagtttattaatcatggcttgtgttcaatttcttgcagggatgcagctattgtgatgctttctggccaggttgcagatggcctaatgacgattcttgcaggcgagatggtactaaataaattgagaaaccgtttgctattgctgaatgcgcgctgattagcaaaatacagtaactgatctgtgagcaatgtatgtggtatctgatcagatcgaccgatttgggcacttcaagctgtggcacatcggaggatcaatcctagtcggcatctccttctcctctgtcttcggtggatgtcttctctgcaccgtcctggggaccgattcctaccttgtgagaaccattggttacagcttcttcgctgccgtcttcaacatcggctgggcggccacacaagtttcacacatgtaaatttgatcacttgaactttgacagaagcttctatctaatttgcaatatgtttgggctctggcttggcatagtgacatggttttcttcctctcaggtcaatggtgaactgcatgacactgaattccacaagccgggtagccttagcaagctgcagaaatgcgttcactatggtaagtactacagttttagcatggaaacatattattactagaatactctttttttacttaaggtatctccgggaaatttcttccactgaactcttgttattataataaccttttgcacatgacaaagtgcattgtttctataccaaagatggtagtattcttttactgccatcttttatctgattgaaggtggcctgatatgtgcttcaaaaataattcctacttgtttagtctcctgtgtcttgtaccactgcaatcattgttctcatgaggaagatgctcaccagtcactacaaatggaaaatgcaggtggcaaatcttggtttatatgcgatagctttggttgtatttgctttagtgagcgcgaaggcatgctcagacattgttcttcaggtgactgcctaacctcgtcagttgttagatttgggtttcttggtcagtaaaagatactccctccattttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgagttcttttatcactcatagtactttaagtgtaatttatatcttatacatttgcataaaatttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaatggaggtagtatgattttacagaccagagacttacctccatgtacaatagtatacttgttactaagttgttcgtatatttatctgcagtaccgttggatagcgtacgtttcaatttttgtgggatgctgcttcctagtggtgttctatgctggaacaaaggagccgacgtatgtttttcttttttcagcgtagaataatgcattagacttttttttgggccgtgaagggtgttttctgaaagggagtgaatttggttttgcagtttgcagtcgggatctgactgcaagaaatcggctaggatttcctggggctactggttcaagaaggccttgtactaccaagtcgctctgttgtatatgcttgcaagattgatcacaaatgtctctcaggttgacatcgtccccactcagaatagaaaatattcttaattactactagcaacatgaaaatgcacattgcatactctaccatatctgttccactgtgacactgattgccaaatacgcatttcgctccctaagttttctctcaagtctgaacattagtctaaaagaatttttttttcagtctctcatcgcgttctacgtcactagagacttgaagatgaatgagtactccaaagcgattgtgagttttcaaacctttttggttaacctctgtccttagaagataccaatcatctaattctctaatttttgacctgcatatatgcagataccagccatcatattttgctgcagcttcctcgtctctgttgttctccaggtctactcctgtcagttaacccacttatactagaactagaatataacaagttaagttttttctcacgtattttgcaagtaaaatgcaggagataaagtggaacagccgccgcctgaagtcgctcctcaccatcggagcaatactctgggtgatcgctggagccgccgtcttcgtcctcccgagtcagatgcacaaccttatgtaccctctcgctatggtcatcggagctgcaaacgccctcgtcatggtaaagaacaacaagaactgcacttctcatttagagaacaagaactgcaattgtcatttttgcgtgatgggacgaatgatcttcgagttctgcttatgctcatgtgtgctgatttcctgatcaggtgaccacaattgggctagagagcgcgctggtaggagacgacttgaacggctgcgccttcgtctacggctcgctcagcttcctggacaagatgtcgtgtggaatcgccttgtttgttctagaatcatacgaaggtatccgctgtaaaaatggcatatttcagcgcattaaccacctaaattcaggatgctttggtttgtggatacaattgatgatcactcattgaaattatgtttctctcttattgcagattcgattagctgcggcgagacgagggggctgtacacggtgagcaggtttgggacaggtctgatcccctcgtgctttgcagtcttcgcgctgctggtcacctcaaccctgaagctccaggacaccaacccgagagctgccgccgctgcactggaagctccactcctcgtctgaagcacgcctccgagtgtgcttctcttaaactacaggacaccagaaaaatcgactgtatgtatcactgtatgtatcacgggaagaagaagaagaacatacataagatgaaattgcattgcagaaccctcttcagttcggtctgaagaggtaagctgcagtctgaagaggtaagctgcagcgtgatagtgtctagtaagattcagaattctggcccgaatcttaaaccttcgatgcttgtaggcagttagaaatgatctaatcagctctgttactgcttcttttcaattagatttgaaaaggtccaatgcttgtagcaatctgtaccagtgttgtatcaaagattcagtttcgagtgaggtttccgtggaaaacagcaaaagattc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0168000, RefSeq:Os03g0168000