Os05g0114000

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Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0114000| Description = Similar to PRLI-interacting factor F (Fragment)| Version = NM_001060994.1 GI:115461718 GeneID:4337608| Length = 3304...")
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Gene Name

Os05g0114000

Description

Similar to PRLI-interacting factor F (Fragment)

Version

NM_001060994.1 GI:115461718 GeneID:4337608

Length

3304 bp

Definition

Oryza sativa Japonica Group Os05g0114000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:717700..721003

Sequence Coding Region

717971..718013,718111..718192,718471..718591,718681..718746,718994..719101
,719209..719274,719512..719540,719626..719761

Expression

GEO Profiles:Os05g0114000

Genome Context

<gbrowseImage1> name=NC_008398:717700..721003 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:717700..721003 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcccgctgttgaagccgtggagaagaagacaggctcagcccccgtcaaggcccctgctctgaatgaaaggatactgtcatctatgtcccggagatctattgcagcacatccatggcatgatcttgagattggacctggtgcaccaactatattcaactgcgtcattgagattcctaggggcagcaaggttaaatatgaacttgacaagaaaactggactgatagtggtggaccgtgtgctctattcatcagttgtgtaccctcacaactatggattcattcctcgcacgctgtgtgaagacagtgatccgttggatgtgctggttataatgcaggagcccgttataccaggatgcttcctacgagcaaaggccattggtctcatgcctatgattgaccagggagaggcagatgacaagattattgccgtttgtgctgatgatcctgagtacaagcattacaatgatatcaaggagctcccacctcaccgcttggctgaaatcaggcgcttttttgaggactacaagaagaatgagaacaaggaggttgctgtcaatgacttcctgcctgcaagtgctgcttatgaggccataaagcactccatggatctctatgctacttacatcgtggagggcttgaggaggtag</cdnaseq>

Protein Sequence

<aaseq>MAPAVEAVEKKTGSAPVKAPALNERILSSMSRRSIAAHPWHDLE IGPGAPTIFNCVIEIPRGSKVKYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCED SDPLDVLVIMQEPVIPGCFLRAKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKE LPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAYEAIKHSMDLYATYIVEGLRR</aaseq>

Gene Sequence

<dnaseqindica>2991..3033#2812..2893#2413..2533#2258..2323#1903..2010#1730..1795#1464..1492#1243..1378#aaagaagcgggaagtacaatactcctctctctctctctctctgtcggtcttcatcttcctcctgcttctgctcctgctcttctttaaaagcttccaatccccccttctccttgtgtgtcgtggcaaagcctcttctcttctcgtgccttctagggtttcctcttcctcgcaccgcgccgcctcgcctcttcgtccccagattcagatctactcctactcctactaccaaggtgcgtaactacgtagtgctatctatgtatgcattttaattaaattactagatcccccattctcttctcctgtttcttcgatcgacgcccacgccgccgtgttgctcgatctagtttgcctgcgattctgtagccaaatttggtatctgcactacgttttcatatggtttcatactattccattccatgcgtgtgttaattgctctgttttgaatgaatgctaaggtaattggtgaaatctttcgcacttgtgccgcagacatgttccgccaatcaaggcctcctcatttttcatccctaccatgtcatattctgccccatgttcacactaattgctcattttatacccatgggggagaaatcgctgtttggtgtaaactgtcagactaatgtagttacctgttatactgtaaatatattttacatttcaattggtaactcaagaagaagtcagcttggaataggacaaacaaatggtccactatttttgctctctaaaagtcattcaaactaggagtacagcctaactcgatgatgtcaaatcatacaactctgaaagagtctgctctggaagaaccttctaatctcacatttaaacaaccacctactgtgcgctctttttctacgatattgccatgctgcatcaggttcatcataacttatgttccatttcttttttcttcaaggctttttatagtttctgtctgattttctacgattgctctggtcgaacctattcgtttggtaatgatgtgattacgtctgtctaaatagctgggatatttatatccatggaatacaaaatattgacaatgatttctagtgttgccaattcttattgatttttggtgggccaattgggtcctatgatctcttttgtgcagttaatcattttttaccttcaaaatttgacattttttcagcttgttcctggatttctgatttcattaactggacttatattgaaacggaattaattacgaacctttgtactccatcacaggttgttgccatggctcccgctgttgaagccgtggagaagaagacaggctcagcccccgtcaaggcccctgctctgaatgaaaggatactgtcatctatgtcccggagatctattgcagcacatccatggcatgatcttgagattggtacatgacatttcatcttgacaaaccatcaattttctatatttctctcataacttacttataggttcctgacttcttcctgcaggacctggtgcaccaactatattcaactgcgtaaggccaccataacagattcacatttgttttttctcccagatttagtttgatacatgttcttattggaaacttatgtcaatagcatagcccttttgaagcgcctctcattttgaacttttagagttaatgtgctggctggtatttcacattacaccaagaatttctcgaccaaaagaaaaaagaaaagagaggaaaaactctaacaaattgtgtctcttttctgtcacttgtcaggtcattgagattcctaggggcagcaaggttaaatatgaacttgacaagaaaactggactgatagtggtaaaacaaggcgattcaattgattcatcattttttttagtgaaaccatatttttccagtgactctaaaatgttttgtacatcatttggttgtatgcacatgtaaaggtggaccgtgtgctctattcatcagttgtgtaccctcacaactatggattcattcctcgcacgctgtgtgaagacagtgatccgttggatgtgctggttataatgcaggtatgtctttgtattttagttggtactagaatcctattgcttgtactcttaagaaaaacagtgcacaagtttcttttcccttcagccattatgtaaattctggtttacttttcttgatatagccatgtgaaatcatgggctttggcttacctcttgtccaataatagtatcattctattaggttatattcacatctcactccttttgtttggggaaccatattaaattctaatttttgttcaaacaggagcccgttataccaggatgcttcctacgagcaaaggccattggtctcatgcctatgattgaccaggtttggcttcattccaacatttacaaagtccagcgaaatgctattctgatccccatgtttctattctgaccccatgtttgtttgaacagggagaggcagatgacaagattattgccgtttgtgctgatgatcctgagtacaagcattacaatgatatcaaggagctcccacctcaccgcttggctgaaatcaggcgcttttttgaggactgtatccttttttatcaacttaatatcaagttctgcattctaaatgaattctaggcaataactcatgtcctaaccttgaactccaccaatatgttgttcccatatgtgcattttctgaaagccatttggcactattttatatctcaactgtcttgtatcatatgcacacatggtcaaccacacaccaacttaaatactcttgggagtcccaggatcatgctaatttcaaaacacttgtcacctcttagaccgaatggtttctttaaccgagacattcagacaagaagaatgagaacaaggaggttgctgtcaatgacttcctgcctgcaagtgctgcttatgaggccataaagcactccatgtgagtacttcacttgcataagtactacaacatactgtacatgtttgtgtaaaatcacatcaagctgactcttaaccatgttgatgttgccattcagggatctctatgctacttacatcgtggagggcttgaggaggtagacttgtgccgcttcctggaccgagaggatggatgttgacgaaaattgtggagatattatcaccttatgaacaaatactattattttgttggtgtgtgatatacaccggtattattcacatttcaagtagtaacagcacaagtagaaactactagtagcacaacaaagagtgatattccttttatggccctcggtgccactacgatatggagtattggtgaatgatgatactttatgctgattctattgatatggttcgagcaaagatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0114000, RefSeq:Os05g0114000