Os03g0196400

From RiceWiki
Revision as of 19:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0196400

Description

Protein of unknown function DUF588 family protein

Version

NM_001055798.2 GI:297600481 GeneID:4331939

Length

6248 bp

Definition

Oryza sativa Japonica Group Os03g0196400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5061506..5067753

Sequence Coding Region

5067028..5067339

Expression

GEO Profiles:Os03g0196400

Genome Context

<gbrowseImage1> name=NC_008396:5061506..5067753 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5061506..5067753 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cacttttttgttcttgcatctgctgctacatgcgtgcaggtgatggcgtacatagtgatctcagcggtggccgcggcgatggaggcggcgctgatcggcaagtacgggcagccggagttccagtggatgaagacgtgccacctctacaagcggttctgcgcgcaggccggcggcggcgtggcgtgcgccatcgcggccagcgtgaacatggtcggcgtcgcgctcatctcggcgttcaacctcttccggttgtacggcaacagcaacggcggcggcaaggccaccaccaccaccatggcgggcggcaagtga</cdnaseq>

Protein Sequence

<aaseq>HFFVLASAATCVQVMAYIVISAVAAAMEAALIGKYGQPEFQWMK TCHLYKRFCAQAGGGVACAIAASVNMVGVALISAFNLFRLYGNSNGGGKATTTTMAGG K</aaseq>

Gene Sequence

<dnaseqindica>5523..5834#atcgcagctatcagcgccactcctcttcaattctcacgcactctccgctccagtgacacacacacacacgaccgctcgctcgtttgccttgctgctgccttagcgagaaaccgggagttagcgagcgagccgtcgtcgccggcgatgaggcaacaacaagcgggaggagttggcgacggggtgagcccgggcaatgtccccgtgtgctactacgggcccgggggccgcgtgccgtcgtcgctggagcggcgggcgcgcgccgccgaggtgctcctgcgctgcgccgcctgcggcctcgccgtgctcgccgccgcgctgctcggcgccgaccgccagacccgcgtcttcttctccatccagaaggtcgcccggtacaccgacatgcagtccctcgtgtaagcctccctcctctcgatcccctccatgtttgtagtagcagtaacttttctttcctgcttgactagtacttagtcacttgatgatgatgaacgcagcagcaagccagcaaccgaatctttaataaactgttccaaatttgttttgcacggagccagcctcacatgcaagatgaggtggctcagagcacagtagtaatattatctcaaaattcgttgttatgtgctacagttatttgcttctcactggtcgttgataggagccaaagattcttgctactaccttttcatgaacagtgtgtgccttggcagccttgcctttgtggttgtttaatttgcgtgttgctcatcaagtaaccaatccccggtaattcggtccatgtcctagtatgctagtaccacttcctttctaaggcaagcgttagagaaagcctccttaatttggtacaccgatcacctctctccatgtgcggtgaagagcacggcgagatgaactggtgatttgttgtggtgaatggtgtgatagagtcgtaatcgtagagaagctggagagattaacggcgaggaaagagtgccaagtgcgaggagatgagatggccagccaagcgtttcgtacgtggagggagggggaagcagccacttttaaagcagcaggcgcggcacggttgggccattttactgccctgtcgttggaagggggtccctgctgcttgcgtggctgcaccaccacacgaagctcacaagtccgtttcattttagccttggctctgtatctgcatgtacacgaagcagaggctctgctgcatcaaagagggtcgtagagccgtaccaaaagttggaaagctccattaatggcacggcctgtccttgatggagccacacaggagagaagagaaagagctctctctgtgtgttttttttaaccttttcttttctgtggagtgaaatagtgcaagtttgtttttctatccggatcggtgcttgagtgtgagtagtgacgatcggcacctaccacgtggtggctgctcaatgcggtcttgatggttagatcattcatggaacgtataaatgcataacctacttctcgccgaccggcacggttggagagggttaaccctcttttctgtagaacttgtcggtagaattctggtcaaaaatgtgctcacacagttcacaggtagtagtaaggccagtccctatccaagacactagacatagtttttataaactccacatcatcaagaaactagtactactactagacactactctttcaatgcaaacatcacttttccatatttaaatttaatgctacttatctcttagagcacccgcaatggtaaagtaaggtgctatctataaaacatgtacatctcagtaatagactagattaatagtaaaccacttcaatggtatgtctacatgggtatctatagctctctaattcattgcctcgtttttctctatagactatctccagattagtagatagctttgctctctctcttcatttaatctcttctaagtaagaaaatatgctgacatggatatcttgtagagagcctatagataaccattgcgggtgcccttatgatgtcttggatattgtgtagaaaccatatctcatgcaagatctggttttcttcttttttttctcatttattcacttgccacatcatctttcattctaggtgacggcttatttaatgctatggacaccatcctagtcattgggttggcctagtagtagtagtagtgtttttaaccttttgtcagaatgattcagggttaataatggaccctccatgcaaaaatataggggcgtctttgacggtccaaaaacaagtttctatcgtaaatttctcttacgctattttgcttactgtgacaaaatcatactactagacataagaaggtactttcgaacatgaaattcaacaatatttttttatggaaacatctaaatagtattggatccatatgtggttaaaaatcttgcggattttagtccaaaaaagggtggttaaaactcaaaattggatggttaaaataagtcttgtacttctaaacagtgggggtaaaataaaaatgatattgacctgtaccattcttatgacaattttttttcataccatcttttttcatatatttagtactgtgtgcgtacaatggctttgaacatcttttctaacggaaaggagtaataaatgcagtccaaaaagaaaatgcaagtcatgcatcaatccatgatcagtgatccagcatgtatgccgagtggcgaccaccattgatccgtatttatttcttttcagatttgtgctccatctgtctacgttttgtagttactgtttcaattgctgtccacattaacacccgtaagcaggaccatcttcccaagggaccatggaatcgtgtaccgttcaaagcactgacatactattgagaagctaacctagatagctaggacacagagtataaaataaaatactactcccttcatcccaaaatataaaccacaaccactattttccaatgtttcataatacaattcacgcattcatgtatgcaattagttagcacttttctcttcttttaatttgttttttgaaatcctctctctgaagatctataatcccattgtatatatgaattgtgtttattggattggtccaaatgagaaggtgataataattcgttcttgatctatacgttagtggtggttggacgttatattttgggatggagggattactacttattaggcagctgtggaggataggccagtgatataatcatcttcttgtcttaaaaaaaagttccattgcaacatggagtaaatataactgtaataggcaccgaaaaataaccatgttttgcttaaactctttaaaaaagtaatttgaataacttcattggaaacacaagtttgatcaaggagctagctatgggacacgatggtaaatcttgctttctctgatgcaggctcttggtgatagcaaatgggatggctgcgtgttatagcctaatccagtgtgcaagatgcttggtgagcatagtgagaggtggtgtccttctcagtaggcccttggcatgggctatcttctcttgtgatcaggcaagtagctgctaatgtcacaatcagcttttcatgtcatttgtttgcttctgttattttctcgcatgtgtgtttgtcactatcaagaggtgacttttcagctatgatgactacattttgggtgtatataaatgctgatgttctgtactatagctctgaaattaggaaaccctttctagtgagatataatcttcaaggataggaaagcctttttactcagacattccatcttcataggaattaggaaaccatttctagggggtgtttgggagaggggctaaaatttagcccctctctcaaaaacataagtccctcggactaaagtttaaccccactttagtccctccaaccaaacactaccctagtcaaacatatcgtgcccaagttaataatacttactttcttatctaagagtatttgtgctacaccaccatgcacaattcatgtaatctctatagttttcctttggatccttccaggttgcatagaactgattggtatcacagtaacctatcaacacatatatcccatgtcagaagaagcaaaggaaaaacataaaatacatatacatatattttaaagttcagggtatgaacttacatatagaaaaagtatctatctttgatatactttcctcctgtttcaaaatacttgatatactagtaatttcatagccagcagaggtgatctcaaccattgatttataagttatactaccattctactactatcagttgatgaggtgatagtctagacagatacaatccattggattagaaagaaatgaacattctagattgatttctattactagtagagaccatggtaaacatctcatttttactattgaaatcaaatttaaaagtttgaccattgatattttcacattattcagtaagtatgcattgtaactcacatggttacattgttgtgcaacgcacatcgacgaaactgtacaatattaagtattcacaaatttagtcataaaaagtagtggccgaaatttgtacagtgaggtcaatgttaagtaaattagatattgacggattaattgaacctttcatttgtggcgcattaaacattggtatctaacataacagtacagcagctcacatgtcacgatcaaaccgtgtaactagatattgatatgtttggtcaaaatcgatagactccctctcatttcaaattaactgtagatgttgattaggtttattttagctttgaccatcaataaactttaaacgtctagatcaatatgtacgaaagtttaatgagtatatttaggatgcaacatacttagctaatatagaatactttcaaatatttatacattttcttcaaaagaaaaaatgagcggacaaaattttaatttgatagtacccagtgaccaatatttgaagatggtgtgggtaccattgtgagaaaaagaaagaacgttttaaatagcagctggaatagatgagcagaatgcaatatatttttcattgattttattgtaattgaacacttttcaagctacagcaaaaatattatgagtagagtgttagtacaatggttgctcctgctagcaataaatgtggctagcctgtataacagcatgtgcttttgctgtctgaattcagaatcagcgttaccatcaacaagcagtgagatgcacacaaagcactgttagatgtttttttttaaaaaaaaagaagacctgtttggtgttagttggtgatatcagaaccatcacggtatagcttggtgttaatgctagagcactagatcgttctgttgcctattctagcattaaattatcagaatacatcgtactctaagctccagggctgtgtccatctgaaagtgacaggagcagtttttacttcagtacgtcattatctaagtttctttacgtcattatcttcgtttaattactccgtatacgcggttgtaacgtttatgatcaatgctgatcgtgttccgtctgaattcgtatggttcttttgacttcttctccaaactgtcaataacacttttttgttcttgcatctgctgctacatgcgtgcaggtgatggcgtacatagtgatctcagcggtggccgcggcgatggaggcggcgctgatcggcaagtacgggcagccggagttccagtggatgaagacgtgccacctctacaagcggttctgcgcgcaggccggcggcggcgtggcgtgcgccatcgcggccagcgtgaacatggtcggcgtcgcgctcatctcggcgttcaacctcttccggttgtacggcaacagcaacggcggcggcaaggccaccaccaccaccatggcgggcggcaagtgaagcgagccagaccaagctgttgcttcttcttcctcctctcgctgctgtactgctgcctagctgcccgtacttctctctcagctctcgtaggttttaacaccacaagtagccatggccaccaccatttgtgttttgagcttttgggacacgaccggtgtatatgatgtgaagtgatccgcggggggggggggggggggggggggcgtgtttgtagtattatatgatactgtaataaacaagcgagaaagcgatgtatcagtgtggccgctggcacgatggcagcagggctagctaggcaaatttactcggttaggtgctcgctgctgctgctgtgacaacctttactctgtttggtgttccaacttccaacttggaagccatttatactggctcgaggcatgtggtgtttcaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0196400, RefSeq:Os03g0196400