Os05g0115700

From RiceWiki
Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0115700| Description = Similar to UDP-galactose transporter related protein-like| Version = NM_001061001.1 GI:115461732 GeneID:4337618| Len...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0115700

Description

Similar to UDP-galactose transporter related protein-like

Version

NM_001061001.1 GI:115461732 GeneID:4337618

Length

6287 bp

Definition

Oryza sativa Japonica Group Os05g0115700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:829819..836105

Sequence Coding Region

829953..830126,832540..832653,832728..832820,832908..832973,833463..833561
,833867..833946,834426..834538,834987..835075,835342..835428
,835515..835583,835672..835770

Expression

GEO Profiles:Os05g0115700

Genome Context

<gbrowseImage1> name=NC_008398:829819..836105 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:829819..836105 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgcggcgtcgtcttcggcgtcggcgtcggcggcggtggcggggacgctgccggtggcggcggcggcgacggggaaggacaaggaggaccggcgccgattggtggggaggtgcggcttcgcggtcgtcggcatcatgagcaccctcctcatctacggccttctccaggaaaaaatcatgagagttccatatggagcagaaaaggagttcttcagatactcgctttttcttgttttctgtaaccgtatcaccacgtctacggtgtctgcgctggtgctaacggcaagtaagaaatccctggaccctgtggctccacttcagaagtactgtgtggtctctgtatcaaacatactgactacaacttgccaatatgaggcactcaagtatgtgagcttccctgtccaaacacttgccaaatgtgcaaagatgatacctgtgatgatttggggcacaattataatgaggaagaagtacggtggaaaagattacttctttgcagttgtcgtgactgttggttgctcgttgttcattctatacccagcatcaatggatgccagtccattcaacagaggcagagaaaacactatttggggcgtttcactcatgcttggttatcttggatttgatggtttcacaagcaccttccaagataaactctttaaagggtatgacatggaaatacacaatcaaatattctacacgacaatgtgctcctgtgttcttagtttgagcggacttattctccagaatcagatgattccagctgtggactttatgtttcgtcatccagattgcttctacgacgtcataatcctatccagtgttgcaacagctagtcagttcttcatatcgtacaccatacgaacatttggggctctcacatttgctacgataatgacgactagacagctggtgagtatattattgtcctgtgtgtggtttgtacatcctcttagctggatgcagtgggttggcgccgccattgtattcggagccctgtacacaaaaagcttcttgagaagtaaaccgcagaagccagccgctgcaaacccgtcgaattctgctaacaacagctga</cdnaseq>

Protein Sequence

<aaseq>MADAASSSASASAAVAGTLPVAAAATGKDKEDRRRLVGRCGFAV VGIMSTLLIYGLLQEKIMRVPYGAEKEFFRYSLFLVFCNRITTSTVSALVLTASKKSL DPVAPLQKYCVVSVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTIIMRKKY GGKDYFFAVVVTVGCSLFILYPASMDASPFNRGRENTIWGVSLMLGYLGFDGFTSTFQ DKLFKGYDMEIHNQIFYTTMCSCVLSLSGLILQNQMIPAVDFMFRHPDCFYDVIILSS VATASQFFISYTIRTFGALTFATIMTTRQLVSILLSCVWFVHPLSWMQWVGAAIVFGA LYTKSFLRSKPQKPAAANPSNSANNS</aaseq>

Gene Sequence

<dnaseqindica>135..308#2722..2835#2910..3002#3090..3155#3645..3743#4049..4128#4608..4720#5169..5257#5524..5610#5697..5765#5854..5952#tggggcccacgcgcctcgacgcattcactccgcctccgcctccgcctccgcctccgccatcgatcgcctcctctcctctcccctcgccgcgccgcgaaatccgattcgcctgctaggctaggctaggctagggcatggcggacgcggcgtcgtcttcggcgtcggcgtcggcggcggtggcggggacgctgccggtggcggcggcggcgacggggaaggacaaggaggaccggcgccgattggtggggaggtgcggcttcgcggtcgtcggcatcatgagcaccctcctcatctacggccttctccaggtgcccctcttcgacctccccttcacattccaatcgctcacgcccaattttgaacccaccaatgggggtaacagctcgggggattgtggcgatctgtcgtggctgttcgtcgtttcctcgaaatccgcgtcacaaatggctgatttgctctctgtcgcctatagactgagcctccattttggtggtgcggggttcgattcaatctagtcatgaaatgatttttttcttaacacaaaaatatggtcgtcaaaaatcaaaatgactgggcgatgcatcttggtgctcccgttacttcgttctagaactggacccttttttttttttagataaagagagttttattgatcttaaacaattacatcgagaagatacaatttctctaagaccactctcggcctctgcatagctaggatgcacacagcctatcaatattataaaagaaaaggaaaaagagcgacacaactgctacaaccgtgccgcagcgacttacaaccacaagtaatcttcatctcttatctccaccaaaacaacacttagactatcaaatggactccctttaaaacaacgcctccaatgaggaaatgacgcacgcacgcgtcatcattgtcatgttccaatcaactaagatcagaccataggttttcacctagggaaattctgtgaactccagacaatgccttcaagaaggaaagaacatccattgccaagtacaaccaactaaggtcagacttagggatttaaccccggagttaaagaattagtaacaagtaccgcctgaatgaagcccactagtattgttgccccctcattccgagacagaacctccataccccaaacttaacacaatcacaaaaggccacgaacatcattacctgcatccttctatagatacccttcgaagataatgtcgcgagaagccaaaaaggcacacacccaaaatccataggctatagctaaataccctacgaagataatgtcgcgagaagccaaaaaggcacacgcccaaaatccatagggtagatctaaaggatgagatatagataagcgatacctttaatcgaagtgaagctgacgatggtctatggtagatctgaacgccactgccttatgatgaagaaaacatcatcgcgagaagtagccactaaaatgatgagaagaaagttggcatccgcccccttcaattgtagcctgccgtattaccttatcggtcccgaaatagatccctccaccaccatccacaacgaacagctagagggtcacacgaacgaaaggatctacgaatcaggcagccgggttgtgacgacgagtatactcttcacctcgaaatcccagaacacctttagcgatctgggaagcaagatgaagaaccacaaagagaagcgtttggggagacgaggcttgccgtcgacgagtcttggtggaacaacgcgacgaggtgaaggtcgccatggagtctgaacccccaccggcaccaagtgcatggtgaggagagcttggcgatgtccacctccgcacttgatcctgagcacgacgtgcccgtcgccccgttcctgatgccgccaccgacaaattcttccagaatcgctgctcagcgcatgcctgcacaatgccccaccgccgccttcactgcgccccgcacggcagcgcgctcgggcggcggcgagacggcttcactcggccggatcgccaatcctcgcgctaatcacggatcgatccgctaatcacggatcggtgccgcagttgcgtgtgttctagaactggaccctgcttgctactaaatcgactgtgcggcaccaaatcttccgtttgtcagcgcgtcatacgtcggctggatatttggtgtgttcacaagttgatctgtgcagtggattgattgtcttgtctcgtcttgcaaataagctcaactaagttgagacgcactgagtccccttcttcgactgcttccttgtttgttttaatgttttgtagatattgatcaactcactggtactgagattggtaattgttcttttgggtcaacttactagcaaaattctgctcgattatactaaattgttcatgaattaaacacaaatcaccattttccgtcctgaatctatggttggaaagttatcaatgtttggatgctgcacaaggctcaaagttcaatgtaaacaggaccaaaaaaaaggatttctgaacattcgtcctttcattccttaaacccctgctagtttcttccatatccaacaaagacaatacatctttcctatccaaaagagctagactcttttttcctttcaaataagcacttaccgacagtcttttttttaaacggtgtattcataaacatgtcttcttggaaaagacacctacgactgtgtacatggacatgatcacttattaattaacattttgatgtaatgttatgcaggaaaaaatcatgagagttccatatggagcagaaaaggagttcttcagatactcgctttttcttgttttctgtaaccgtatcaccacgtctacggtgtctgcgctggtgctaacggtacagatctctctgtgagattacctccaacagaatatgctaaacccctaaatcctgtatgtacattcatgcaggcaagtaagaaatccctggaccctgtggctccacttcagaagtactgtgtggtctctgtatcaaacatactgactacaacttgccaatatgaggttatattcaatcccatttattcatgtctagtgtcattggtattgattcatgttattaatttaccaaatataatttgattgtttcaggcactcaagtatgtgagcttccctgtccaaacacttgccaaatgtgcaaagatgatacctgtgatggtaatttttactatactctactagtgctttaacctgcttttgcataaatctctagtgttcgtcagttcactaatgatggacatcaaagcaaccatactacaaagcttagaagtttcatcaaaaaatttgttacatattctaatttaagaaatttcataatgcttatgtcctaacagaaaaatgaataaagtaatgccaatggccatctacatatacacatatgcactatgcaattatttttaagaatgtcacaggtgtcccatacttattaacatagatcgacggatagaaaatccgggtagagcacatcagcatttcagcaaccgctctttttacgtagtagaaatcttatgtatatatgtgtgtattatagatgtgaatcgttttttgtcttctctactttacacgttccatgttcgagttctatttccctgacaattaagatggtcccttttcttatatctattaccttgtttttaattttgatagatttggggcacaattataatgaggaagaagtacggtggaaaagattacttctttgcagttgtcgtgactgttggttgctcgttgttcattctatacccagtaattcccatatccatctctgttcatttactgctgaatatcacattatttcgtgctagataaatgtacacggatagaaaatgtgttggaaaacataagaaatttcaattgccaccatttccaaacgcattacaaaattataataggaatagagcatgcgctagaattcaattggtggcagtatggaggtgagagttttatcatccgaagaactaatcttaataattgaaaattttgtaccttgcttagattttggtatttcttctgaagtgattttttttcctgtgttgtcttcatggatacaggcatcaatggatgccagtccattcaacagaggcagagaaaacactatttggggcgtttcactcatgcttggttatcttgggtaatccttcttatcttaaactcagcgaggcaaatcatagcattctataacagtttacatttatgaaatcttatgattactcagctctatttggcatgcaaatctgcttttgcttgcactcatcaatcatataacacactgttacattcaaaatacaattaaataattttgccatgttagaactattttcttttgttatatatatacaccaatacatgtttgctggcacataaaaaatctgggctaggaaatataaaatctttccactgtatgattcaatatcgttcgtggaatacaaaagtataagcagttcaatcccctaaaatgagtttactacagtggtattggagtattagtacagttacattattgtcagttaaaattcactgttgtgttttctttccctttttactttctcttgatcagctctgaccctcagacttctatctaattggatcaaatttccttgttgattttagatttgatggtttcacaagcaccttccaagataaactctttaaagggtatgacatggaaatacacaatcaaatattctacacgacaatgtgctcctgtgttcttagtttgagcggtaactgcttgcccttatggttgctgtattttcttttattatgtgctgcagaaatttggcctgcaattctttgctttcatgattctatcaatgttttccctgtacatctgcactgtacagcgcaatactccctccgtacttgtaaaggaagtcgtttaggacaatgtttaagtcaaaccttgggaatataaatcatgaataactcttaagttgttgagtttgaaaatgtaaaaaatatatgaatagatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatacttttatagaaacaggaagtcaaagttgtgttttggagaccatgtcgctgttcaaaacgacttcctttacgagtacggagggagtacattattaacaactgctacggtcatgattttatatctctgttgctgtaattctattacaggacttattctccagaatcagatgattccagctgtggactttatgtttcgtcatccagattgcttctacgacgtcataatcctatccagtgtaagactaaccttttgatattttaacgtgcaattttgttgcttgttccttgtttccatgtcaccacctctccacataagctgtaaatggagatgaaatttaatactaactagtacgtctggtgggacattaaattaggacaaaaaataatcttctgaactgtctcaaattttaaatatttggcacttaacccacaaattgaagctagattgtgactgtttgcataattagtacgatatattgttttactgtgtttcaaattccaggttgcaacagctagtcagttcttcatatcgtacaccatacgaacatttggggctctcacatttgctacgataatgacgactagacaggtgaatgctgtttttatcatccttaaatgtgtatagatgtgttatttaacctttccataacagttattttccatgtattgttgtagctggtgagtatattattgtcctgtgtgtggtttgtacatcctcttagctggatgcagtgggttggcgccgtaagtcatctgtcttagccttcgtaaatcattccatgatattacacattgttcgtttcagttatgattaacatgttttcggtaacaggccattgtattcggagccctgtacacaaaaagcttcttgagaagtaaaccgcagaagccagccgctgcaaacccgtcgaattctgctaacaacagctgaccaaacgacataagaagagatccaccccatttgttgccttgctgcaccggaccaaacaccaaagtcttggtgtgagatatgaatgaagacatcctgatgagttaactggacgacaggttgtagggttgtgttaacatggagctcagaaggctcaagggttattaggctattagcttaggaggatccagtggcaaatagttgaggaagcccagcctgctggtagtgaaatgacttggctgccgtttttgaggctttatccaggccgttctctgcactgcaggtgcttgatatataaaatgtaaaattatctttgcagtcattagattacaagtact</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0115700, RefSeq:Os05g0115700