Os05g0116700

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Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0116700| Description = Conserved hypothetical protein| Version = NM_001061008.2 GI:297603711 GeneID:4337625| Length = 4187 bp| Definition ...")
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Gene Name

Os05g0116700

Description

Conserved hypothetical protein

Version

NM_001061008.2 GI:297603711 GeneID:4337625

Length

4187 bp

Definition

Oryza sativa Japonica Group Os05g0116700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:876897..881083

Sequence Coding Region

876971..877070,877176..877261,877529..877618,877724..879121

Expression

GEO Profiles:Os05g0116700

Genome Context

<gbrowseImage1> name=NC_008398:876897..881083 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:876897..881083 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcgcggcggcggcaccaccggtggctcgcgacccgcggcgaagcaccaccgccgctcgaggccgccgtcttcgccggctccgtcgtcgcggcgagcggcacggacggcaaccacctcaccggagtcgaagggcgcgacggcgttgcaggatccggtggtttcctccatggaagagacctctttcacttttgaattcaaacgagggtctaaaagagctaagaaaacgatgctgcctgaagaatcacataaagggaaaaatgattccacgaagggtttctctaacaaaagaaatctggttcctgcaaagacaccatctgcaaaggaaagaccggagcaagtggagttcacacattgttcacctggtattgttgccaggctcatgggacttgacaccgtgcctcgccccaagaaagctcttgaccggtgccaaagtgacattcagtgcaatatgcagcgggtcctatctggaggtgatcaagtctatgatgcttcatctgaggatcaaccatgtagcagcagtgctgatgatcttcctgaactcaaggatgttttcgaggtcactgagatggagaataaggagacgtgcattgggttgcaatcagggaacgaggagccatgtcccaggagtgataaggatgatttggaatttgtgaggcagaaattcttggatgcgaagcgcctttccaccgatgaatcccataggaattctaaggagtttgctgaagcacttgagatattgtactccaaaaaagatgccttccttgaaatccttcaggagaacagtggtgcattgccaggattctcagggcacatctttggtcacaatggattacaatactccaaattgtttgagcaagagaactgttctcgcatgggtgttgaacgtgacgagttttttaatgtaccaaaggagttggaaaatcctattcctagtagtcgtctcaacgaaacttatggtgtaccactggattctttgccaccaaaagggagcaagagtaaaggttcaagccgtcgttcccaaattgttgttctgaaaccaaatcttcagaggaaaagttttacacctgtcctatcaagtgaaacatcgcattttggtgaaatgagcactaacaactgttcaaggccccaacaccattgtatgcatagggggcgagtcacgcactctgcaccacttaacaatgatcaagttttacaaccaaaacgagacacacctggactgaggggtgcaatagaaacccctaaaataggttccagaaggaaatcgtctgagagagagtgtcagcttgcaattggcagtggaagggcaacagatactcctagttcttttgaagataacctaccaatttacccacccaatcattctgttggatcatcagtctgcagaaaggccaaaaagcacctctcggaacgatggcagatggcctatcaatctgatgaagaaatctcaatgcctaaagataccataacattaggggagatgcttgagatgaccgatagagatgcgacaaaagtaatcacccacaagatttcatcagaaaccaattacaatcatgataatgtgcagaaggcaccagcctgtcctgttggtatcagtagtaaagatggttggaagacagggatttattgtaaagataattcaagatctggcacagtcgaggaatttttctag</cdnaseq>

Protein Sequence

<aaseq>MLRGGGTTGGSRPAAKHHRRSRPPSSPAPSSRRAARTATTSPES KGATALQDPVVSSMEETSFTFEFKRGSKRAKKTMLPEESHKGKNDSTKGFSNKRNLVP AKTPSAKERPEQVEFTHCSPGIVARLMGLDTVPRPKKALDRCQSDIQCNMQRVLSGGD QVYDASSEDQPCSSSADDLPELKDVFEVTEMENKETCIGLQSGNEEPCPRSDKDDLEF VRQKFLDAKRLSTDESHRNSKEFAEALEILYSKKDAFLEILQENSGALPGFSGHIFGH NGLQYSKLFEQENCSRMGVERDEFFNVPKELENPIPSSRLNETYGVPLDSLPPKGSKS KGSSRRSQIVVLKPNLQRKSFTPVLSSETSHFGEMSTNNCSRPQHHCMHRGRVTHSAP LNNDQVLQPKRDTPGLRGAIETPKIGSRRKSSERECQLAIGSGRATDTPSSFEDNLPI YPPNHSVGSSVCRKAKKHLSERWQMAYQSDEEISMPKDTITLGEMLEMTDRDATKVIT HKISSETNYNHDNVQKAPACPVGISSKDGWKTGIYCKDNSRSGTVEEFF</aaseq>

Gene Sequence

<dnaseqindica>75..174#280..365#633..722#828..2225#agtggagagagagacgagcaaagcagagcagagagagagaaggcctgcgccggcgaagcctcgagaggaaaaggatgctgcgcggcggcggcaccaccggtggctcgcgacccgcggcgaagcaccaccgccgctcgaggccgccgtcttcgccggctccgtcgtcgcggcgaggtgaggagttgttgaccgattcgtgcgtgctcgcttccggttttttttttttttctgttcgactgagcaaactggtttcgccattgcccttggtgatcgattcagcggcacggacggcaaccacctcaccggagtcgaagggcgcgacggcgttgcaggatccggtggtttcctccatggaagagacctctgtaagcacaccatttttcatttgagttttaccttcccactgtgctgcgtgttgttgccgtaagcttactatgagtagtacgtgctaatgtcggcgagcgagtatggcgtatgctttgattcgtttgatttgcctgtacttttgagtagctctgtttcagcaagcttaacggcattctcaagattcagatatttttatatcgcatcctgttgctgaaattcactgttgagtctctcattgtcccctaatgtttacttgatcgtaccagttcacttttgaattcaaacgagggtctaaaagagctaagaaaacgatgctgcctgaagaatcacataaagggaaaaatgattccacgaaggtacaggctactgcactgtccacatgtgcattactgcaggaaatttcgtttcttgctgagctcctgcctaaggctaatgcgttgtgtcctctctatgttctgcagggtttctctaacaaaagaaatctggttcctgcaaagacaccatctgcaaaggaaagaccggagcaagtggagttcacacattgttcacctggtattgttgccaggctcatgggacttgacaccgtgcctcgccccaagaaagctcttgaccggtgccaaagtgacattcagtgcaatatgcagcgggtcctatctggaggtgatcaagtctatgatgcttcatctgaggatcaaccatgtagcagcagtgctgatgatcttcctgaactcaaggatgttttcgaggtcactgagatggagaataaggagacgtgcattgggttgcaatcagggaacgaggagccatgtcccaggagtgataaggatgatttggaatttgtgaggcagaaattcttggatgcgaagcgcctttccaccgatgaatcccataggaattctaaggagtttgctgaagcacttgagatattgtactccaaaaaagatgccttccttgaaatccttcaggagaacagtggtgcattgccaggattctcagggcacatctttggtcacaatggattacaatactccaaattgtttgagcaagagaactgttctcgcatgggtgttgaacgtgacgagttttttaatgtaccaaaggagttggaaaatcctattcctagtagtcgtctcaacgaaacttatggtgtaccactggattctttgccaccaaaagggagcaagagtaaaggttcaagccgtcgttcccaaattgttgttctgaaaccaaatcttcagaggaaaagttttacacctgtcctatcaagtgaaacatcgcattttggtgaaatgagcactaacaactgttcaaggccccaacaccattgtatgcatagggggcgagtcacgcactctgcaccacttaacaatgatcaagttttacaaccaaaacgagacacacctggactgaggggtgcaatagaaacccctaaaataggttccagaaggaaatcgtctgagagagagtgtcagcttgcaattggcagtggaagggcaacagatactcctagttcttttgaagataacctaccaatttacccacccaatcattctgttggatcatcagtctgcagaaaggccaaaaagcacctctcggaacgatggcagatggcctatcaatctgatgaagaaatctcaatgcctaaagataccataacattaggggagatgcttgagatgaccgatagagatgcgacaaaagtaatcacccacaagatttcatcagaaaccaattacaatcatgataatgtgcagaaggcaccagcctgtcctgttggtatcagtagtaaagatggttggaagacagggatttattgtaaagataattcaagatctggcacagtcgaggaatttttctaggtcgaagtctctaccgacctcagctaccaacaatgcaaaattaccgtgcaggaaacaatctgcaccaatttgtaacctgcccattctgaaagatctattgaatgcaccaactgatgaatctggaagtgaacatgtcaggaatagatcatcttttagaaaaacaaagcagagaagtgggaaggctatcatccatgcaggaaaggaaaacatgctacctgtgaaagagattcatgtaacttcagagaaagcaagacatagtatctgcatttccgatttgtctcgagcaagcaacacacatagtgaacatcctgatggtgttatgagtaatgaggatcaccaaacatctggttctactgctctagatgatgatttacaaagttctaaagaaaggatggggtggacagagctgaaactaacaccaccattaccagtgacaaaagaagacacatcgattcataatcaggacaacatagtgttgaaggtatgccgcaacaatattcgttttatgatttttcacattgtttttcttgttaacttgtcagcagatacaatcatacaaataatcagcatgaaaaattaacagaattcctataaatagaaaatgattttttaaggaaattggcattaagaactgatccccagttttccaagtgtgaggaagtaagtgggtgggtggaggttgacactggacagttatcatgttttcatacttctagggtaccgaatgttctactggactttcattttgctactgtagtttatgggctagtaaattgcaatatcttaacttcatatagtatgatatggtatacatagctttgagtcatttgttgtttaattctaattattaaagttactaaatttggctccaggaccaggaggggagaaaccaacaagtggagattgacatcgctgaagctgaatctcaagcaatagattcttctcatatcataagcttagaaaatcacaaatgctcaaattcaactgcttcattgcaacaaatttgtggacatgatactgcatattctggaatttttaaaggcgtcagtgacggtattcaaggtatgtgtatcaaaaactcattctacttttctgcactccaatattatcacattgttcatgttattcatgtttgtctcttcccataaatgtagaacttagaatgcaacttaagatgctgaagatgggtgaccaagatgatacctgtggagatgatatctatatgttgtcgagtgatgagtgcagtgatacagacaacttgacctatcagctgatggaagagcaattacctgtatttaaggatgagtacgacagggacttcagttatacaaatgatatacttggttcagcatctgattttctagtctacccagaagattggcaagtgagcccagatgtgtttgtgtggcttgaagacaagtacagcaagctgcttctatggtcgaaatcggacaggagacttttgtttgacctcataaactccatcttagctgatatgactgctccaggcaacagtctgtgttcaaatatcatggtgaagtgttggtctgaaatggatccaaggaagttagctgaaaatgtttggcaaacagtgctcaataggaggaattatgaacccttttctttggattgtgttgaagctttgccattggaccatcattctgaagttgaagcaataggagcagagattgtcaagatgttacatgatgatattctagaggagtctgtagctgaattcatatcacagtagagctgcatctctgtcagatgtacatagcctgctgcaaatcactggtttgcaagaaggttttaccatgtactattatgtgggggctccatttaattacatttgatatggagcgtttgtaagctgtgaaacctattgtacctgggagccctggactaattgtgctactaccaactaacactactctagtagaacatactgatgtcaaattttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0116700, RefSeq:Os05g0116700