Os03g0213900

From RiceWiki
Revision as of 19:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0213900

Description

Conserved hypothetical protein

Version

NM_001055902.1 GI:115451532 GeneID:4332050

Length

6489 bp

Definition

Oryza sativa Japonica Group Os03g0213900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5994551..6001039

Sequence Coding Region

5994678..5994739,5994881..5995109,5995212..5995310,5995424..5995458,5995536..5995611
,5996394..5996504,5996889..5996972

Expression

GEO Profiles:Os03g0213900

Genome Context

<gbrowseImage1> name=NC_008396:5994551..6001039 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5994551..6001039 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacggaggaccgcgcccccaaggtccccgacgagcccgccgccgccgcggccaagcagaggaagaaaaggaagtgggatcagcccgcggaggatgtcgtcgccgcggcggcggctgctgctgctgtggcggggttgcccgtggtgaacatcggtgccctctccggcgtgtcgatcccgggagccgccggtccgttggggaatatagtcgctgtgccctatactttgccggtgcatctggcgccttcggtgctccagaccgccgcggcagcggtccagaaattgagtcaggcaaaaatgcctgatgagctaatagcaagagaaattgttataaatgacgccgatccgtctgtgcgatataagcttacgaaacggcaaactcaggaggagattcagagatgtacaagcactgtcatcattactaggggaagataccatccaccaaatggacaaactgatggtgagaagccactctacttgcatatatctgctgggtctcagctaaaagatactgctgagcgtatcaaagcagttgatcgtgcggcttcaatgattgaggaaattttaaaacaaggcccaaacccagaaggcactatccagagcaacggacagatccatcacttaacgttgcagcttgggttcgtggtccaaatgtatgttctcgtattttgtaaaatattaagcgttattggataa</cdnaseq>

Protein Sequence

<aaseq>MTEDRAPKVPDEPAAAAAKQRKKRKWDQPAEDVVAAAAAAAAVA GLPVVNIGALSGVSIPGAAGPLGNIVAVPYTLPVHLAPSVLQTAAAAVQKLSQAKMPD ELIAREIVINDADPSVRYKLTKRQTQEEIQRCTSTVIITRGRYHPPNGQTDGEKPLYL HISAGSQLKDTAERIKAVDRAASMIEEILKQGPNPEGTIQSNGQIHHLTLQLGFVVQM YVLVFCKILSVIG</aaseq>

Gene Sequence

<dnaseqindica>128..189#331..559#662..760#874..908#986..1061#1844..1954#2339..2422#agccaaaccctcctcagcaaccgcacgtttcaggctctcagccgccgcatcccatccgtactcgccgccgccgccgcctcgcccgtcggttcatatcgattcctgagcctcccgccggcgagcacccatgacggaggaccgcgcccccaaggtccccgacgagcccgccgccgccgcggccaagcagaggtgcgacctccctccctatcccttcctcgctcgctccctcccctgtcgccggagctctcgcagatctcccgccattcgccgcgaaatttctcgccacgcaacggacaggcgcatctgattttgcgtgggcttgtgatgtaggaagaaaaggaagtgggatcagcccgcggaggatgtcgtcgccgcggcggcggctgctgctgctgtggcggggttgcccgtggtgaacatcggtgccctctccggcgtgtcgatcccgggagccgccggtccgttggggaatatagtcgctgtgccctatactttgccggtgcatctggcgccttcggtgctccagaccgccgcggcagcggtccagaaattgagtcaggtgtgacaatgatgtatttttcgtaagtatatcaatatgtgttgattaggcaattcagcacacggttctaaaattttgtctgtgtacatcttgtttcttcaggcaaaaatgcctgatgagctaatagcaagagaaattgttataaatgacgccgatccgtctgtgcgatataagcttacgaaacggcaaactcaggaggaggtaaaattccttaacgagacaattgttatgtgcttcctgtacagggttaaacaccatttttgcgtagatcactttgtgatagcagtaataatgatttgctggatacttaacagattcagagatgtacaagcactgtcatcattactaggtaagccaggcaaaacgtagatgtgacttgtgactgcgatggtcccttttgatatttacttgctttgacctaaccaggggaagataccatccaccaaatggacaaactgatggtgagaagccactctacttgcatatatctgctgggtctcaggtaaatcttgttcatatcatcaaattgagcctccatgttatttcctgtcgtacctgggagctgttaattatttgaaatctgaattactaattttatctgaatttcttgcattgcaactattacataatcacataaactcatgtaaatggatgtttcgatgggctatccacattcattaactatctctgcaagtcttcattgaattgttttctctatgatggtggtgtcaatttatatgttcgtattttataagtaacagtgacaagtaccatgatttgataactaaattttgtatctgttactaccagattggctattacttctttagctccaagcctccaactaacatcaagtgttgggagttaggactgaattggtcctaggtttctgatttctgttcaactaggaagcttatatagtaatggagtatgcacctttgatgttataaatgttatagaacagtgattgcaacagtgtttttctttagaaaatcagatgctagttttctgaacctatgctgatgtttgatacagccaataattcagtatgcctgtctgtttggcacaacactctctagttgtgcaatggtgttctgctattctttcacagtgatatcatccatcattattgctgttgtaatttcaacaaaaaactacatggtccatgccatttatgttgcagcatgtttcagtgattgcttttagtatagtacaatacctgtagtacaaaagatcctttttatagcaagataatggtatgctaatattttcccccaactttagctaaaagatactgctgagcgtatcaaagcagttgatcgtgcggcttcaatgattgaggaaattttaaaacaaggcccaaacccagaaggcactatccagagcaacggacaggtcttcccttcatatctcagtctgtttaatatatgatatctaatggattaataggcaccaaaccaaatattataagtacacatgtcataatccatctctgttattcattaaatgtgttaatacatggtctggttagttcattcataattatgttgatgcaatcttgagaaggaaaataataatccacatatatggttggtgcttgtattattgtttcctgattaatatggaaccagttacagtgtagtttttttttcaaggggagcagataaataattactacttaacatatggcaattcttgttgagaaggctaacatcttccttttgatgttacaggccgttcatccttttagtgcctcaatatttttgggttttcatgcagatccatcacttaacgttgcagcttgggttcgtggtccaaatgtatgttctcgtattttgtaaaatattaagcgttattggataattcaaccatgccattgttgctattactgtcagtattgttttatgaattcagtccagttctgtttacccgtggaaaagaaaagaaaactaatcttgaagctttctctggcatcccaattgggatgggagaaactgtttttgtgctgctggtgcttctgatttctttatgcaggatcagtacataaatcacatcatgaatgaaacaggggtcactgttgtactcagaggaaaaggttcagggactccggtcaattgtcatgctgaaggtctgtagtttattttggtagctcttggaaactcgtgagttgggaagcatattacttctgttcctttgtgtaatgtctattgctatactacagcatcacaacaacctctacacctctacatctcaagtatgcatgtgaagaacctagaagctgcaaaagttttagcagaaaaccttctagatactatagcagctgaatttggtgcttccaggtctgtaagtttggaatttttgttttgtgaaattatggattcttttgctttagtatcgttcattataactgcccttataaaaaaatataaattgaaattttacatgatcagttggattttagttatacaaataccatgcttcagttatgctatgattagtcactaattcatcttctcttttcgtatttgcctcgaactattccttttttgttggtatcattatagttgtaccagtaaatgctttatttatcttgctgaatattagtactagtaaatgcattatctatcttgctgaatattagggtgagagggtcttatatccagacatttctaacccatttgcactcgcctgatcagtaaaacatggattgattctgttcttagagattgtatcgtaccacaaagttctaagtatattttcattttcttttgtatggcagaatttcttcttcaaaagtatatggtgctgttccacctccgcagcaattattggatggtgtacaaacgtcaggaacaataccagatgtacaccctactttaggccctaatgtgttaaccggagcatcacattcctttgcatctactggagctaatgcttccttagttgctccttcagtgacatctcaatctggggccccgtcttattctgtggtttcaccacctagtaacctgatatgtcctagtcaaccagcaaatggtgggacattttatggtggctatgggggcatttatccccaggcaactccattgcagcaggttgcattaacactcaagcatgcttcatcatcatcaacccaggttgtttcagcgacgtctacatcaacaagcactgtggcaatggtgaacccttgttcacacgcagaagcagataaacgctcacaaaggaggaaattccaggaattaccagtttcacagggcgcaaccacagaagttcaggtagcatttacttgaataggcaccactgctattgcccaaaattaatattcgattgaaatgagcagcagtgttacttcatttgcctatctcggacatctttatgtttccaccactaaaaaaaccatccacccatgaattcatttcccctgattcatgtcgaacccctctcttctctacaatgttggcgtagatgcccctcctgtctctctctccacaccattcttagtgttccatctcctacggactgccacgcaccatctttagtccactgatctaatatcatatgtacatggttttcaaagcatttgataccatagaaccctgtgaaattgatttcgattctatatacagttgatgttctgatggcatcgctacgtaagtccttgcatcatcctatttgaagatgtgatttcagtgtcattgtcgtaatagtgcttttaatatggtaatgtcttcaaagaaggaacttgtgctgcagaataagcaaatgtttttttagttcatgttatatattgcatatgcaaccacatgaacaaattgaatgtttaattatttactactgttgagaaatcataacttcatttatactagaaaatctacgattcaaaatgtgatgtgaaattttcttttcatagtggtccttcaatgtttaccagattggcacgttttttctttttccaagactgatttatctgctactgacgttttatttcattccaggtattttctctgaccttgtctgaagctcacagggtggtaatagaatgtgaatttttcacagggcttgttacaagctggagttttcaccaatggagtttaactgacgagagtcttctgcttctgaattggattattgcttgtattttttgatactacatgagtttttcaacccgtaaattgaattagcaaggcacagtcttctgcttctaaagtggatgactgcttgtactatcttgttactaaccctttgtgttcaagctgttgatgcccacaagaagacttcgtaaaggactgcatttttaccattccttgaatttgaaatttggtagtttcttaataggtttaggtacaatttggtcaagttttttccttccttttcagttggagaaataggttcaaccattaaagttttgcacgttaaagagttctcactcagtgacattcacaagtagtcctagaaaagcagaaacttcttagcctaatgaaacaatagtattaatgcagtaccttttgctttatttctttgtagacactttttatgaagtttccgttatgctctttagttatatgaactttagaaagatgtaagttaatctctataactctgcatggttaactgatatccatgtatgatgcttaccagtcataatgctttcaatttatggatttgtgctgtttatgcacaaattttgttgatttcatcctttatttgtatttcattgtgtactatttactctaatgcaaaggaatttgatggagaagtctttttgtttcatttttccagaactcacaacagaggtccaaatttgttaagacaggtttagacggtttaggtaacatgaccaattcatcgattgaacctccaattaaagttcagcctggatcaaatgggatgcttcttcaagatcaaccgcatgtttctgcacatccatctgcatccaagaacatgctgccgccaccaccaccaccacccaggaacatgctacccccacctcccaagagcatgcctccgccaccacctaagtttccttcaaatgagatgtcaagaaatgaggataggtgtgcagatttaaacaagccaatggcacctccgaagagcatgccacccccacctcccaagagcatgcctccgccaccgcctaagtttccttcaaatgagatgtcaagaaatgaggataggcgttcagatttaaacaagccaatggcacctccgagatccttggacgtgagttcagtctcaccaccaaatttgtattcagcacaattaccttcaaaggagcctagagtggtcaaacctggtggggcatctgtttctggtaatggtggaacactataatatcgttgttttctacatagtgacagaaccaatccatctttactgaacttctttggcattcatttgcagatactctgctgaagcttatggattatggagatgacgatgaagaggacaacatcgatgagacgaatagcgtgcttggagggaacccaacttccatttctgggcagaaaccgttttgggctgtgtgaaaaattagtttgttctgtactccaatgcaagttgagtgcaggtagagaatgttgcctgacctgatgcatcagctcaatgccattacgctaacagttcatcgctcaatgttctcagtgtgagctatgtacaatatccagttccttttcttttggggtggttcaaatgtcgacgtgatggtcatttttcttttgacatataatcctgtagaagctagtgtgatcaggcagggcaagggcacttgtctgcacgacattcagagtgctgatgatgcttaagccaatttttgctagcttctcttggatgctgtatgttgctggttttgttagtttggtgaccttgacttgtaagatcaatgcaacaaaaccatgtgttgatacataaataagatcccattttgacttcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0213900, RefSeq:Os03g0213900