Os03g0214100

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Annotated Information

Function

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Expression

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Structured Information

Gene Name	Os03g0214100
Description	Replication protein A1
Version	NM_001055904.1 GI:115451536 GeneID:4332052
Length	3466 bp
Definition	Oryza sativa Japonica Group Os03g0214100, complete gene.
Source	Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome	Chromosome 3
Location	Chromosome 3:6006965..6010430
Sequence Coding Region	6007019..6007164,6007303..6007449,6007549..6007773,6007878..6008055,6008170..6008437 ,6008526..6008628,6008724..6008848,6008933..6009011,6009092..6009236 ,6009342..6009502,6009592..6009712,6009923..6010117
Expression	GEO Profiles:Os03g0214100
Genome Context	<gbrowseImage1> name=NC_008396:6006965..6010430 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>
Gene Structure	<gbrowseImage2> name=NC_008396:6006965..6010430 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>
Coding Sequence	<cdnaseq>atggattccgacgcggcaccgtcagtgacgccgggggcggtggcgttcgtcctggagaacgcgtcgccggacgcggccaccggcgtgccggtgccggagatcgtcctccaggtcgtcgacctcaagcccatcggcacccgcttcactttcttggcgagcgatggcaaggacaagataaagacgatgcttctcacccagctcgctccggaggtgcgctccggcaacatccagaatctcggcgtcatccgcgtcctcgactacacctgcaacaccatcggcgaaaagcaggaaaaggtcttgattatcacgaagctcgaggtcgtgttcaaggcgctggattccgagatcaagtgcgaggccgaaaagcaagaggagaagccggcgattctgttgagtcccaaggaggaatccgtggttctctccaagcccacgaacgcgccgccacttcctccggttgtgctgaagcccaagcaggaggtgaagtccgcgtcccagatcgtgaacgagcagcgcggcaatgctgctcctgcggcgcggttggccatgacgagaagagttcatcctttgatctccctgaacccctaccagggcaactggatcatcaaggtgcgtgtcacaagcaagggcaacctgaggacgtacaagaatgctcgtggtgaaggctgcgtcttcaatgtggagctcactgatgtggatggcacccagatccaggcaaccatgttcaacgaggctgccaagaagttctatccgatgtttgagctggggaaggtgtactacatctccaaaggatctctcagagtcgccaacaagcagttcaagactgtccataatgactacgagatgaccctgaatgagaatgctgttgttgaggaagctgagggcgaaacttttatcccacagattcagtacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtagatgttattggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaacgagacgattccaaagcgtgacatcgttgtagcggatgactcgagcaaaactgtaaccatatctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactctgcgcctatcattgcgataaagagcctaaaagtatctgacttccaaggtttgtctctgtcaactgtggggagaagtacaattgtagtgaatcctgacttgcctgaggcagaacagctcagagcttggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggcgcatcaagggttggtggcgcgagatccatgtacagtgatagagtttttctgtctcacatcacaagtgaccccaacttgggtcaggataagcctgtgttcttcagtctgaatgcctatattagccttatcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaagaaggtgactgaggcaattggatcaggatactggtgtgaagggtgccagaagaatgatgctgagtgctcactgaggtacatcatggtcatcaaggtctccgaccctactggtgaggcctggctttctctgttcaatgatcaggcagagaggattgttggctgcagtgcagatgagcttgatcggattaggaaggaggagggtgatgacagttaccttctcaagctgaaggaagctacttgggttcctcacctgttccgcgtcagcgtaactcagaatgagtacatgaatgagaagaggcagaggatcactgtgaggagtgaagctccggtagaccacgcagctgaagccaagtacatgctcgaggagatagccaagctgacaggttgctag</cdnaseq>
Protein Sequence	<aaseq>MDSDAAPSVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPI GTRFTFLASDGKDKIKTMLLTQLAPEVRSGNIQNLGVIRVLDYTCNTIGEKQEKVLII TKLEVVFKALDSEIKCEAEKQEEKPAILLSPKEESVVLSKPTNAPPLPPVVLKPKQEV KSASQIVNEQRGNAAPAARLAMTRRVHPLISLNPYQGNWIIKVRVTSKGNLRTYKNAR GEGCVFNVELTDVDGTQIQATMFNEAAKKFYPMFELGKVYYISKGSLRVANKQFKTVH NDYEMTLNENAVVEEAEGETFIPQIQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTL SVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQELLDMVDSAPIIAIKSLK VSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGTSMASIGSDMGASRVGGAR SMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISLIKPDQTMWYRACKTCNKKVTEAIG SGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKE EGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEI AKLTGC</aaseq>
Gene Sequence	<dnaseqindica>55..200#339..485#585..809#914..1091#1206..1473#1562..1664#1760..1884#1969..2047#2128..2272#2378..2538#2628..2748#2959..3153#ccgccgccgccgcagctgaatcttcccgcgtgaagccttcaactcggctcggggatggattccgacgcggcaccgtcagtgacgccgggggcggtggcgttcgtcctggagaacgcgtcgccggacgcggccaccggcgtgccggtgccggagatcgtcctccaggtcgtcgacctcaagcccatcggcacccgcttcacgtgagtgtttcttgtgtgcgattcctctttgatgagcgttcttgcgattccgcgccacggaaaaactcgcccagatctgggtgggttcttgttcttcctcagcgacgagttcctcacgatctctctgttgcgttgcagtttcttggcgagcgatggcaaggacaagataaagacgatgcttctcacccagctcgctccggaggtgcgctccggcaacatccagaatctcggcgtcatccgcgtcctcgactacacctgcaacaccatcggcgaaaagcaggaaaagtacagatccgcgcgctccacctgtctgattcttcagaccactcgcgtttctttgtcttctgaaatctgaatctctggttttgttcatatgcgtcacagggtcttgattatcacgaagctcgaggtcgtgttcaaggcgctggattccgagatcaagtgcgaggccgaaaagcaagaggagaagccggcgattctgttgagtcccaaggaggaatccgtggttctctccaagcccacgaacgcgccgccacttcctccggttgtgctgaagcccaagcaggaggtgaagtccgcgtcccagatcgtgaacgagcagcgcggcaagtaagcgattcttgcgagatccccatctctcttgttcagttgtttctgatgcagaattgttggtgagactaacctgccgattcttgatgccttcctgtttgcagtgctgctcctgcggcgcggttggccatgacgagaagagttcatcctttgatctccctgaacccctaccagggcaactggatcatcaaggtgcgtgtcacaagcaagggcaacctgaggacgtacaagaatgctcgtggtgaaggctgcgtcttcaatgtggagctcactgatgtggatgtaagtgcaacctaccgtgaaatgtttattccgtaggatgtaattgcagttcatgagcaattctgaattcttgtatgttgattgatgagttaattttgttggatctgtgtacagggcacccagatccaggcaaccatgttcaacgaggctgccaagaagttctatccgatgtttgagctggggaaggtgtactacatctccaaaggatctctcagagtcgccaacaagcagttcaagactgtccataatgactacgagatgaccctgaatgagaatgctgttgttgaggaagctgagggcgaaacttttatcccacagattcagtacaactttgtcaagattgatcagctagggccatatgttggtggcagggagctagtaggtaaggcaatagtgctttcagttcagtgatgtgttcttgttcctactttgtgaatgtagtgttctgactagttttaccctacttgcagatgttattggggttgttcagagcgtatctcctactcttagtgttaggaggaagattgacaacgagacgattccaaagcgtgacatcgttgtagcggatgactcgtaagcatcatttggcttgttaactcctttcttttgatgatgtgaatgctctttatgttttatgtgctgataacttacatttaatctgatggcaggagcaaaactgtaaccatatctctttggaatgatcttgccacaactactggtcaggagctcttggacatggtagactctgcgcctatcattgcgataaagagcctaaaagtatctgacttccaaggtatgtttgtgttaccttcctgcatgtggtaggatctgaattggcgattatgtgctaacagcattactactataatgtcgacaggtttgtctctgtcaactgtggggagaagtacaattgtagtgaatcctgacttgcctgaggcagaacagctcagagcttggtattgtcctaatctcaaacactccttttattatctttcaaactatctactttggtccttgacgttattttggcaaacaggtatgactctgaaggcaagggtacttcaatggcatcaattggttcagatatgggcgcatcaagggttggtggcgcgagatccatgtacagtgatagagtttttctgtctcacatcacaagtgaccccaacttgggtcaggataaggtaaaatcttggaatctttgaaagaaaatggaattgttcttgatgtttagtttattagcactttctagttgtgattgtcctaaatttacttgttatgttttgcagcctgtgttcttcagtctgaatgcctatattagccttatcaagcctgaccaaaccatgtggtaccgagcttgcaagacctgcaacaagaaggtgactgaggcaattggatcaggatactggtgtgaagggtgccagaagaatgatgctgagtgctcactgaggtaaaactttgggctgaattacaccgtgcatgcttgaatttgagatgatacaaagccaaagctaatgctacactggttcctttcttcaggtacatcatggtcatcaaggtctccgaccctactggtgaggcctggctttctctgttcaatgatcaggcagagaggattgttggctgcagtgcagatgagcttgatcggattaggaaggaggtaattttgccaatcccacagtaactttgattcaccttcgtgtaaattctaggctttagtttaactttgtgcgaattccaggctgtagttcaagcttgtgcgaattctaggcttcagttcaactttgtgcagattctaggctttagttttctacatgcctaagattgctatttaagctgtgcctaagattgttggtctcaattgtttcaggagggtgatgacagttaccttctcaagctgaaggaagctacttgggttcctcacctgttccgcgtcagcgtaactcagaatgagtacatgaatgagaagaggcagaggatcactgtgaggagtgaagctccggtagaccacgcagctgaagccaagtacatgctcgaggagatagccaagctgacaggttgctagatgcaaaattatcggtgaagcttgaagagtccatgaaagcttagatgcagtgtttcggtgaagcttttgaagtgcctgtccatgaaagcttttgaggtgtaatagctttataaattatggtttctccactgcaattaggtgctagctagtattagccttttgtattataggtagatgcatgcttaacttgtttttgaggcaaccagaatgtgatgctgttatacagccgttttatcttcaaatgtgatggttgcctggacagattgtgaaattgataattggaatcagtaactggttgatgttaatttcctat</dnaseqindica>
External Link(s)	NCBI Gene:Os03g0214100, RefSeq:Os03g0214100