Os03g0219900

From RiceWiki
Revision as of 19:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0219900

Description

Similar to 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment)

Version

NM_001055940.1 GI:115451608 GeneID:4332089

Length

2117 bp

Definition

Oryza sativa Japonica Group Os03g0219900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6322816..6324932

Sequence Coding Region

6322874..6323291,6323458..6323609,6324596..6324817

Expression

GEO Profiles:Os03g0219900

Genome Context

<gbrowseImage1> name=NC_008396:6322816..6324932 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6322816..6324932 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccatcaccctcctctccctcgctcccgcggccacattgctccacctcccggcctccacttcgctctccacctccttcgtcgccgctccaggccccatctccggccgccggtccgtcgtcctccgcgcccgcccgcgccgctgcgtcacggtcgtgtgcagcgccgcggcggccgaggccgcggaggcggagcccgcggagaagttccggctcgacaacctgggcccgcagaaggggtcgcggcggcggccgaagcggaaggggcgcggtatcgcggcggggcagggcgcgagctgcgggttcggcatgcgtggacagaagtcgcgctcggggccaggcgtccggcgcgggttcgagggagggcagatgccgctctaccgccgcatccccaagctgcgcggcattgctggaggaatgcatattggcttgccgaagtatgtgccgttcaatttgagagacttggcgcgtggcgggttcaaggatggtgacgagatatcattggaatccttgaaatcgaggggtttgattaatccgtctggcagggagagaaagcttcctctgaagattttaggagatggtgatgtatcagtcaagttgaatatcaaggctggggcattctctgcttcagccaaggagaagctcgaggcagctggttgtactttaagtctggtaccaaagcggaagaaatggctaccacaatcttatctgaagaaccaagctcgtgcagaagaatactttagcaagaaaaatggtggtgctggtgaatctgatgaagcatctgcatag</cdnaseq>

Protein Sequence

<aaseq>MASITLLSLAPAATLLHLPASTSLSTSFVAAPGPISGRRSVVLR ARPRRCVTVVCSAAAAEAAEAEPAEKFRLDNLGPQKGSRRRPKRKGRGIAAGQGASCG FGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHIGLPKYVPFNLRDLARGG FKDGDEISLESLKSRGLINPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLEA AGCTLSLVPKRKKWLPQSYLKNQARAEEYFSKKNGGAGESDEASA</aaseq>

Gene Sequence

<dnaseqindica>59..476#643..794#1781..2002#tccccttctatccacccacaccagcaagccgctcaggcgcgctctccgctccaccgccatggcgtccatcaccctcctctccctcgctcccgcggccacattgctccacctcccggcctccacttcgctctccacctccttcgtcgccgctccaggccccatctccggccgccggtccgtcgtcctccgcgcccgcccgcgccgctgcgtcacggtcgtgtgcagcgccgcggcggccgaggccgcggaggcggagcccgcggagaagttccggctcgacaacctgggcccgcagaaggggtcgcggcggcggccgaagcggaaggggcgcggtatcgcggcggggcagggcgcgagctgcgggttcggcatgcgtggacagaagtcgcgctcggggccaggcgtccggcgcgggttcgagggagggcagatgccgctctaccgccgcatccccaagctgcgcggcattgctggaggtgagtctcttcgagcttcccgcttcccctcctcgccctcaatcgaagcctcacacattcaaatgcactggaaattgagtgggaacacgctagcaccttccatttggaatgcagaaatgctgggattgagaagtgacccgttgcaagttctaccttgcgattgcaggaatgcatattggcttgccgaagtatgtgccgttcaatttgagagacttggcgcgtggcgggttcaaggatggtgacgagatatcattggaatccttgaaatcgaggggtttgattaatccgtctggcagggagagaaagcttcctctgaaggtacactatacgacgattatccttcttttttttaagtcggttctgtagatgaccatgttttactgaaaactgaaatatgaatgccttgcatttgatctttgccagtgaattcatcaagttcaccagcagtcttgggtaatcctttagttgttgatgttgtggattgaatggctggcctttttttttcttgtagttctcaaatgttgctgtgttggtctgtccttagcagcaattaccaagttgagtattcgaagtctcaaagttgtgtgtcgggatcaattttcttagctcgtgttggacaaacacggtatgatttgacgagtgtttctattggctactcaaggatctagaacgtatgagttatgatgaacccacacatggtgtaggcctgcatatgagcatatctgtcaggcataaacatgaagtggtatcaagatcccaacaaaaccatgtgctcttacatgtaccactgcatgtctgcatcactcccaacatacccaaaatatttactgtttgtctccactcttagttggcggattgctggagtagatgcattagtgtgctactgggttgccccttatagtgggtagtggtgtggcgcttgatcactgatgtgacaaagacttctccaagggtggaacttaatgcaccttgaatagcataattgttcaacttttattgttctttctggtcctatttcatttgattgattttttctatactctaggctcctagctatgtggtacatataaggtaaaacccacagggctaaaacaggtatcaagacctaagtcataatgtggggagctatcaactttatccttatgataggctttttccttcttgacatctgattctgatgttcagcagatggcgttcctttcatctttgtttgagtacaatgatactgcaatgttgctgttgttattgtatcttttatcatgcgggtagtattagtatgctaacttttgaaaacctatctgtagattttaggagatggtgatgtatcagtcaagttgaatatcaaggctggggcattctctgcttcagccaaggagaagctcgaggcagctggttgtactttaagtctggtaccaaagcggaagaaatggctaccacaatcttatctgaagaaccaagctcgtgcagaagaatactttagcaagaaaaatggtggtgctggtgaatctgatgaagcatctgcatagaattcatatacactgtacttctcctttacccttttctttaacatatacttatttctcttaccttgttccaaaagttccacgttcaacgaattttgaatccgtgcgatatgcaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0219900, RefSeq:Os03g0219900