Os03g0253800

From RiceWiki
Revision as of 19:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0253800

Description

Mitochondrial TIM21 family protein

Version

NM_001186425.1 GI:297721980 GeneID:9272347

Length

5451 bp

Definition

Oryza sativa Japonica Group Os03g0253800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8162955..8168405

Sequence Coding Region

8163065..8163223,8163908..8164027,8164116..8164164,8165086..8165264,8166373..8166524
,8167587..8167608,8168207..8168323

Expression

GEO Profiles:Os03g0253800

Genome Context

<gbrowseImage1> name=NC_008396:8162955..8168405 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8162955..8168405 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcccggatcgcgaggctgctacagcaccagaaccgccgcctcctctccaccgccgcggaggcctcctcccgccgtccgccgcgcgctcccctcagcggcgccatccccaagcatgaagttgcaaaggctgaagcctcatctttaaaaaaatcaaggtggtacatgatcaagtcaaacccttcaagtcctctcacaacacagcgtgaaagccacaaagtatctactcatttagttaggccttctgcatcctactccacacaagcttcagagcagaacccaaaagagggtacaaaagacctgaaaactgttgaagatccatttgattcccctacctacaacatacctgagaagccagtgacatttgctgaaggggcttcctacagtcttgtaatagttgcgggacttggaattgcagcagtggctggatatgctgttttcaaagaacttatatttgaaccaaaagagtacaagatttttggaaaagcgctagcaagagtacagaatgacagtcaggttacagcaaaaattgggtatcctgttactggatatggcaatgaaagtagaaatcgtgcagctcggcagcgcattcctaacaaggtttggacagatgaggacggtgttgaacatgtggaggtaaacttctatatccgaggaccacatggagctggaaaggtgtattcagagatgttcaaagataacaatgacaggagttggaagttcacataccttattgttgagattgtgtctccgcatcgtgtacaactaatgttagaatcttacgtaccagcataa</cdnaseq>

Protein Sequence

<aaseq>MASRIARLLQHQNRRLLSTAAEASSRRPPRAPLSGAIPKHEVAK AEASSLKKSRWYMIKSNPSSPLTTQRESHKVSTHLVRPSASYSTQASEQNPKEGTKDL KTVEDPFDSPTYNIPEKPVTFAEGASYSLVIVAGLGIAAVAGYAVFKELIFEPKEYKI FGKALARVQNDSQVTAKIGYPVTGYGNESRNRAARQRIPNKVWTDEDGVEHVEVNFYI RGPHGAGKVYSEMFKDNNDRSWKFTYLIVEIVSPHRVQLMLESYVPA</aaseq>

Gene Sequence

<dnaseqindica>5183..5341#4379..4498#4242..4290#3142..3320#1882..2033#798..819#83..199#tcctttcgatcggctctcccctctcttctccttccccccttcccctcctgcaagtaaaacaagcgagagactccccccctcaatggcgtcccggatcgcgaggctgctacagcaccagaaccgccgcctcctctccaccgccgcggaggcctcctcccgccgtccgccgcgcgctcccctcagcggcgccatccccaaggtaaccccgcggcaaccggggaggttgtaaccctaaacccgcttaaacccctgcgcgcctccgaggtgttcggcggaatgccgacaccggctcgcatgcctctgtcgctgtttcattgatagcttcgtgtttaagtgagctttccggtaatgtgatgccctagttaggtccctgagccggacctaacgcatgccaggcgcaggtttcactgaagtattaattgttgcttagggcaatgggttatgcggtgagctcatctggagtcttatcgccattgtagcatgtggttcctgttgaatctatatacttagagcctaaagcaatgcttgatttgttactctaatagtggtaatgaatagtgcctttttatttttctatatagacacaccattatctccgacctttttattttctatatagatacaccattatcctgaccttgtttcaacttttaactgttcctaatccgagactgaatagatccttaagaagattgttgaatctgttcattgtgtgataaactaatagttttttttgtgtgttttctgctctaggtgacatatatgtctttttttacctttcgtcttttttttttcagcatgaagttgcaaaggctgaaggtctaagctcatcttcaatcctgaagctctctactttgttcatcaagtgtctatttatgcaagtttcaaattttcttatatggttgcatccatgtttctaaagatgttctgggtattattgcatctaagaaatgaccgctgtttcttgtgctgagtggcacaacatctcctacactacatgttataaatgttgttacttactttgctttaatttaactgcaaataagcatagaagctaaattgatagtgcaaataagaataacatgttagatgtatctgaatgctcactaaactcacagtgtggtggcaaatgtactcgcatccctataaatttcatctgctacctcaattttggttccttcctgatcatacttttagggacaatctacatataattattttatctgcctacctgctgcttgtcacaattttttattcaaattcttgcaatattttttcagctacatcaaaagaattgctagttgctgacatataatatgctttctttatgaaacatatattatctgctgatcaaagattttattttttgtttttttaatgttttaagcatagtatgacagagagttgcatattctaatttcaaatattgtacgtactctttcatatactggtttagagagcattactgaatgcactgcccttgtaatactaagtcaagcatactcttcatacatcaaacctactagactgaaatgatttaagttgttgcaaaatgatagtatgctatttactcaaaattgaaagacattagtgaatcttgtgttgttggcttctctaacgaaattgtgctgaatactcaataggcattaaacctcagatcaatactcaatagacattcaatgaagttcatatttacagaaaattgtttctcatctgtatggtctcatcaagtcatcataactttattaattttcagacatttaatagtctcacgttcatgttcttttttgttggatcttgaccaacaatgctttgcaagttgcaacatcttatctatatttatttagtgctgagtgaattttcttttgggaaactttgcagcctcatctttaaaaaaatcaaggtggtacatgatcaagtcaaacccttcaagtcctctcacaacacagcgtgaaagccacaaagtatctactcatttagttaggccttctgcatcctactccacacaagcttcagagcagaacccaaaagaggtaagcaacagcttgtctgttttgctatttaaattgttcaatattttgttcctgcttttttttatcctctgtgagtacaattttcatcaatgttgttggccatgttactgcggattatcaagtacaatacatgacactattaagcatgccacctcagtgagcatttgtatgcatacatgtgtaatcttgagtaggcttcttttcatgtcatacaatcaaaactgtcaggaatcttgcctcagggaactgctggatcaattgttgactaatgtatgggcatcatctcagtaatgtggtggtgaataatcttgttagaaaaaaaagttaagagttattcaattgctatgagataggggtgattccgtatatgtcggaaatataatgttttttcgttatatcaacatagttaactgctaggtgctctggtgttcataatctcagtctacccaaatatgctccgtaattttacttaagccagaagagtagactatagtactacctcatacaaaaagggaattccaaagaagatgaccacaaagcctaggtgtcacctaagaaactcagtagcacctagtcaccctgagcggcccatgctcagcaatctaagctgggaggctgcataattagccaaaggcagtccaagtcagagcaaggcatggcagtctgggtaggcttcttgttaggctgggcaaccaactggatggcaagacgttcactgctcctctcacctccaccctcctggcattggctactgaatgtggtcctcaatctttgctggctggagttataagagagaggaagggcagctcccaggcagagaggaagggaatagaggtagaagagacaggtttgctctatgccccatacctccttactggcagggcagtcttgtctatggtcttaggttttcagttggcaacgtattgctggagaataattaaatcataattcccatcaacaaactaatcacctgacacatatttgtcgccttgtaatctcaacatatacattgctccgaactgtaatttttatcagacattcccccctgatttgttgttttctatttcttattttattgcttataaaagactgatgtcttcatcctcagggtacaaaagacctgaaaactgttgaagatccatttgattcccctacctacaacatacctgagaagccagtgacatttgctgaaggggcttcctacagtcttgtaatagttgcgggacttggaattgcagcagtggctggatatgctgttttcaaagaacttatatttgaaccaaaagagtaagttttctgcattaattgttaattcttttgacttaggcacttagctcaacaacaagtactacaatctttagtcccaggaagctgggtggactagaggtgaaacccaagtatagccaggagaaccaaaatgttggatctctaacttccacatattcctaatactactaggaatgataccggtgaaagaattatgtaaattcttatgtagttctggcacttggatgttggatcgccaacttcctcgtactcctatccaaacccaaatctttggatgcactccatgccttcagtggtctttttaccactttcttccatttcagtttttatccaacccctgcctctcctatttttcacatggcttaagattccacgatgaaccagttcctcaggaagcctccattttgaatgaaatcaaaggtactttaataatatagttgctcgcataattgtatggcttatgacagtaaaatacattcaagtctaaccagttatgataatttggtaagtcctacaaatatgcactgtgcaatggtctttcttcacattgtagcgttaatattttgtataatatggaaatagttcctttttatttattttttaaaaaactaatatcacacacacatttattaatccagatgtttctaggtttgtttatgaccctcacatgtagccacttacggtgccaaactttaaagaaacaatcagtaagctatggattttttttcttgtatgctgcagcagagtgccatggcacatttctgatttgatcctatgcaagtcacttagcaagttggcatgggtgttcttgttacttcctagtgaaagttctttttgtgcttcgaatctttttcttatgttaaatgcatatattattatatgcaatttgaaagagcttgcactgctgttaccattctacaggtacaagatttttggaaaagcgctagcaagagtacagaatgacagtcaggtttgtggacattagtgctattccacttccttcatacatatcatattttccccttggtacaacttcatgttttcacacgttttgtcaggttacagcaaaaattgggtatcctgttactggatatggcaatgaaagtagaaatcgtgcagctcggcagcgcattcctaacaaggtttggacagatgaggacggtgttgaacatgtggaggtagcatatattcttgcctctgttgttctgtctcttttaagtatgttgatttatttgccactcaagtttagtgtggactgtaacgccccgattttcgttcgggattaaaaaaaaaacatttaataatgcattttctagaaattaaataaaagataaatcaatttaatcaagtggaataatgggagaattaaatgtttttctgggcgtgacatggacacatgctccttgacattttattatatttatatggcatgggctaatggcttcatttaactgaggggagattgtgaatgataacatagcaagaggaaatgagaaatgagcacacaagcttcttgactagaaagactgtttgagtcaatgccaataataatacttagaagtagatatcatcgtgtaatggccttctcgatgatactttgctctttgtgtaatagtcttcgtatgctcttgcacttgactgttgtttggttacaactagatcgtcgggtgtaatctttatggtctatccttgcttaatgcaaacatgttctcagttgtcccatgtattctgtgaagatacaattctttgtttattgggaaagggggcattaggacgggttttgatattaagacatatagtttgcatggttatgcacacggttgaatttgattgatcactcgaaacacactcatcttatttaggtaaacttctatatccgaggaccacatggagctggaaaggtgtattcagagatgttcaaagataacaatgacaggagttggaagttcacataccttattgttgagattgtgtctccgcatcgtgtacaactaatgttagaatcttacgtaccagcataaggatgcaagaaacaagcagttagcagtggcagaattgttgtaaggttcatgcctccacacttacctatccaatgtgtacatctctcatatttagaaatcatcctttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0253800, RefSeq:Os03g0253800