Os05g0121000

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Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0121000| Description = Protein of unknown function DUF1218 family protein| Version = NM_001061030.1 GI:115461790 GeneID:4337650| Length = 2...")
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Gene Name

Os05g0121000

Description

Protein of unknown function DUF1218 family protein

Version

NM_001061030.1 GI:115461790 GeneID:4337650

Length

2263 bp

Definition

Oryza sativa Japonica Group Os05g0121000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1093820..1096082

Sequence Coding Region

1094467..1094559,1094860..1095074,1095470..1095746

Expression

GEO Profiles:Os05g0121000

Genome Context

<gbrowseImage1> name=NC_008398:1093820..1096082 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1093820..1096082 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctcacttcggctcaacggattgctctcactgtctctttctttggccttctctccttcttacttggtgtcatcgcagaaaacaagaagcctccttatggaactcctatcaaaggaaaggatgttgtcatctgcaagttcccaagtgacccaactattgcaatgggaagcctctccgtggtgtcacttgtgttaaccaccatcgtagggcatgccgctatcttctatccatacaagagcaagtctgttcctcgcggagcattatttcgaagcgccagcttatctgcgttcttcgttattgctgagcttgtctcagctctggcgtttgcaatgttgctctgggcaacggtcaccgagggtcttcaccgaagcaacaacatccaccatgacctggatacccagtgccctactgcgaagactggcctctttggaggagccgctttcctggcccttgatgctgctctcttctggcttgtttgccagatgctagctctcaatgcaaggtctgactatctggatgaggatgacaagggcgattatggccaggtttttgcttctgatgttgatggcacaaaggtctga</cdnaseq>

Protein Sequence

<aaseq>MALTSAQRIALTVSFFGLLSFLLGVIAENKKPPYGTPIKGKDVV ICKFPSDPTIAMGSLSVVSLVLTTIVGHAAIFYPYKSKSVPRGALFRSASLSAFFVIA ELVSALAFAMLLWATVTEGLHRSNNIHHDLDTQCPTAKTGLFGGAAFLALDAALFWLV CQMLALNARSDYLDEDDKGDYGQVFASDVDGTKV</aaseq>

Gene Sequence

<dnaseqindica>648..740#1041..1255#1651..1927#gagttgagttgaccaacttaactacctttcgccgagctcgcggagagaagaagggattccagtggagcacgcgatttcccatctgctcgatcccctcctcctcctagggtttcctgctcctccgcccgcctcgccttgctgctgccgttgttggttggtaatctctctcctcctccatcgtccccttccccagattcgtcgtgctcagtttggtgacgatctgtcgtcaccaccgggagggaaaatccccactgttttagtgaacttgttgggtcttggctggtggtggtggggtgatgctggtaggggagtgggctaggaggaatagatcggccgatgcgatggattgggagttcgatctaactccattccctcccaattcgggctaggagaagaggtgtcgtcctgattgagagggattgttaagattgcgtgcgtcagtagatgaagcgaatgggaggacgcaaggggacttttgaaaaattaaatatgttgttttagtcttttgaattgtgatagcttcgcttgcctggatcgagatgtgtcattgtcgtgcgaagaaattaaattactcgatgccatgctgttaaaactccatttttgtgttactgattttgtctgatctcaaattggcatatgcaggtgcgatggctctcacttcggctcaacggattgctctcactgtctctttctttggccttctctccttcttacttggtgtcatcgcagaaaacaagaaggtgcatcacttcactgactaaaatactcgttcctgttaatgatgttttgtcttgtacacatctttgaaaggtttctactagtaccgtttaagaaataataataattattatggaaggcttatctgtggttttgtcaatagacactatgatgaccacttggtgcaatttcccgatacactttaactgtagtgcagggtagtaacacatcttctgctgcgctatatctttcatcaactgccactctttatgaacttttgaaaattgttacttgttgtgaattttatttggtctttgatgcagcctccttatggaactcctatcaaaggaaaggatgttgtcatctgcaagttcccaagtgacccaactattgcaatgggaagcctctccgtggtgtcacttgtgttaaccaccatcgtagggcatgccgctatcttctatccatacaagagcaagtctgttcctcgcggagcattatttcgaagcgccagcttatctgcgttcttcgttattgctgagtaagtgattctcagatctgcagctaacaatttcatgtgcatttgaagcagtagtatctggcattgatgcggatccacctcatcgagccttcatttgattatgattagctacaaaattattaattaataaaaaaaatacatatttgttttgtggaatcattgccttagatggaccctaaaggtgttagtagttctattagtcgtgtacagttccatagattaatgctaagctgtgccaatgacacatttttttttcagatcaaaagaattacctgtattcaaaatttttagtgggactagcttaattctgctgatatttgagaatctcgacattgcattttgttttcctgctaactccattgatacattttcatcatctattcttgtgaaatcaggcttgtctcagctctggcgtttgcaatgttgctctgggcaacggtcaccgagggtcttcaccgaagcaacaacatccaccatgacctggatacccagtgccctactgcgaagactggcctctttggaggagccgctttcctggcccttgatgctgctctcttctggcttgtttgccagatgctagctctcaatgcaaggtctgactatctggatgaggatgacaagggcgattatggccaggtttttgcttctgatgttgatggcacaaaggtctgaggctttgactgggcagggtttcatatttagtgtcacttagctatattatcttatcgacaaagctggttcgattagctctctaaaatctgtagatatgtgctatgccagttgcaaagtcgtatatataagggtatttgctcattgcacgtttaagcttacgttgtgaaacaataacagtattctcagtatggtccgtctgttagtaatctccgtggagctaagtgtcctactattaatttttctggtgttactctgtgtttttctgtgacgctgattcttgaagtataaatctaacattgtgggaggtatagatatatagataggtaaagataaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0121000, RefSeq:Os05g0121000