Os05g0121400

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Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0121400| Description = The start codon is not identified.| Version = NM_001061032.1 GI:115461794 GeneID:4337652| Length = 3736 bp| Definit...")
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Gene Name

Os05g0121400

Description

The start codon is not identified.

Version

NM_001061032.1 GI:115461794 GeneID:4337652

Length

3736 bp

Definition

Oryza sativa Japonica Group Os05g0121400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1120061..1123796

Sequence Coding Region

1121617..1121733,1122076..1122355,1122678..1122913,1123044..1123187,1123288..1123455

Expression

GEO Profiles:Os05g0121400

Genome Context

<gbrowseImage1> name=NC_008398:1120061..1123796 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1120061..1123796 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agcattggatcccaaagaactccaaaatgcgtgaaggctttgaatggactagtatcaggatggggagactctcctgagaagctccatcaagaatgcctcgttcacacactttttcagaggcccttttcctgccatgtagatggttgccccttcagctatagcaggaaggaccatttgaaccggcatctacttacacatcaaggaaagctatttgcatgccccatggaaggatgcaaccgtaagttcactataaagggtaatatccaaaggcatgttcaggaaatgcataaagatggctctccttgtgaaagcaagaaagagttcatctgtcctgaggaaaactgtgggaagacttttaaatatgcttctaagttacagaagcatgaggaatcacatgtcaagttggattatagtgaagttatctgctgtgaaccaggctgcatgaaggcatttaccaacttggaatgcctcaaggcccataacaaatcttgtcatcgacatgttgtctgtgatgtctgtggaaccaaacagctgaagaagaacttcaaacgtcatcagagaatgcatgaaggttcctgtgttactgagagggttcgatgccacctcaaggactgcaagttgtcattttcaaagaaatccaatctggacaagcatgtgaaagcagtccatgagcagaagcgaccctttgtatgtggattctctgggtgtggcaagagtttttcgtacaagcatgtaagggacaaccatgagaaatctagtgctcatgtgtacgttcaggctaatttcgaagaaattgacggggaacgaccacgtcaagcaggtgggaggaagaggaaagccatacctgtggagagtttgatgcggaagagggtagctgctcctgatgatgatgccccagcttgtgatgatggaactgagtatttgagatggcttctctcaggctga</cdnaseq>

Protein Sequence

<aaseq>SIGSQRTPKCVKALNGLVSGWGDSPEKLHQECLVHTLFQRPFSC HVDGCPFSYSRKDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPC ESKKEFICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAH NKSCHRHVVCDVCGTKQLKKNFKRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKH VKAVHEQKRPFVCGFSGCGKSFSYKHVRDNHEKSSAHVYVQANFEEIDGERPRQAGGR KRKAIPVESLMRKRVAAPDDDAPACDDGTEYLRWLLSG</aaseq>

Gene Sequence

<dnaseqindica>1557..1673#2016..2295#2618..2853#2984..3127#3228..3395#ggttcgagtcgagggtttctccttctcccagtgcgccgccgtcgccaacatctggagcctcgcggagccgctgattcagcgaattcctctgcaattagaggtaatcctctgcttattcacgccgcgtgtagcgcggatttcggtgattttggttgatttggttgtgattttgctcgttatgtgtgttttgtgacgcgaattttgggggattggtttggtcagagatggggagcgtggagctcggagcggaggaaagggaggtcgccggcggggagggggggagcaagggggcggcgcctcctgctagggatattaggcggtacaagtgcgatttctgcagtgtcgtccgttccaagaaggggttgatccgtgcccacgtcctcgaacaccataaggtcgctcatggcgtctctcgcttcatagttcagaacctcagatgcgtctagtggtcatattctccgtgctttggctgctcgccacggtggttggttacttggatggatgaatgattgactgtttggttttgtcggtgctgctatttgtgtttttaggatgaagtggatgatttggatgattacttgggacgtggtggcggcgagacgtgcaaagagatggaccatgattgcaaggtgtgcggtgctagttttaagaagccggcccatttgaggcaacacatgcagagccattcacttgaggtatctgaatttcgatacatgttcactgaaatgatcaagttctttggcgcatgtgatagatgctatgtgtttctctgttcagagtattacttgcaatagctgtgatagatgctctgtcctatgtagggactagggatggtgatagttatgctgtgttgacagcaaatttccctggacagttaatagttgtcgtttcactccttttttggttgggtaggtttgttgatctatgctgatttttgcagactatttcactattttgttacatatggatgtgtgaagcattggatcccagagaactccaaaatgcgagaaggccttgagtggactagtaccaggatggggagacccttctgggaagctccttcaagaatgcctctttcacgctcttcttcaggtgatttcttctgttgcaaaaaactgcttgctctatgctactgctgttattgttacgtgcgctgcattcttagtttttccaagctattgaaggatcttttcttacgcgcaagtctactgttgaagaactgcatgcgtagcgctgttggttgtatctaatgcaagcaccacttgatggtcttttgatcaaacagttaaccaagtaggtagagcatgtacactgaagagatagctatgcttgtgatggaataaccagctcctcgtattcccctttagtgtaaaagacgtgtatctgtcctgttcagtgaatattctacacaacaaccaaaacaattactcatttgaaagttaattcaagtatataggtataggtgccatttggctctctgtttcgttggattagtgcatggcctattgtggtttctgatatattttgattttggcagactatatatgactgcgtgaagcattggatcccaaagaactccaaaatgcgtgaaggctttgaatggactagtatcaggatggggagactctcctgagaagctccatcaagaatgcctcgttcacacactttttcaggtttgcttgttcatttcaaattgctcattctaagacttgattttgttccaactgttgttattacttacagtgatatgtacgtactgagatattgttattctcaagctacttaaggatcctgtcttagatgcaattactcagtcaagatacacatgtatatttgtcactggtatttgactattcatgcagctgtctcatttgcagcatagtagtgtgattatcggaacagttttagcatattgcactgaatggatatgtgtgtacattgacctacttattttatgtcaagtaaatcataaagttctgctttcagtataacatttaaggtatatgcttttgcagaggcccttttcctgccatgtagatggttgccccttcagctatagcaggaaggaccatttgaaccggcatctacttacacatcaaggaaagctatttgcatgccccatggaaggatgcaaccgtaagttcactataaagggtaatatccaaaggcatgttcaggaaatgcataaagatggctctccttgtgaaagcaagaaagagttcatctgtcctgaggaaaactgtgggaagacttttaaatatgcttctaagttacagaagcatgaggaatcacatggtgagatacttgtgtgccatatttttcttactgtctttaaatagctcagcaaccctcctagatcaattttatcatatatagactggttatgtcatctgacactctgactttttctatttctgagctagaatactgatataaactcttcaaagtatcctgcaagatactcctgtttcttttaaagatcatttatctcttcagatcaaatgcatgatttacttatactgtgcatgcgctgtatgcctgcttttacttcctgtgagaagttgagaagtgagaattggttaattgtgccgtgacataccttgttttacttgtgcagtcaagttggattatagtgaagttatctgctgtgaaccaggctgcatgaaggcatttaccaacttggaatgcctcaaggcccataacaaatcttgtcatcgacatgttgtctgtgatgtctgtggaaccaaacagctgaagaagaacttcaaacgtcatcagagaatgcatgaaggttcctgtgttactgagagggttcgatgccacctcaaggactgcaagttgtcattttcaaaggtaggatttcaatctttcagggttgattctgtttcacagaatttttttatttctttccaataaattgcaaatcgttccatccttttcaattttttttttttgggggggggggggggactttgaactgcagaaatccaatctggacaagcatgtgaaagcagtccatgagcagaagcgaccctttgtatgtggattctctgggtgtggcaagagtttttcgtacaagcatgtaagggacaaccatgagaaatctagtgctcatgtgtacgttcaggtaacacaaacaacaattctgctatgaaatagctgaccgatggtatcttcttcttgttaaacccttaagatgattataattttcccatcattatgtgcaggctaatttcgaagaaattgacggggaacgaccacgtcaagcaggtgggaggaagaggaaagccatacctgtggagagtttgatgcggaagagggtagctgctcctgatgatgatgccccagcttgtgatgatggaactgagtatttgagatggcttctctcaggctgattcgtcgtgaaccagaatacagaaatgtgagatctttggatatcaagggtgttgatatggtttgagatactagtagcaacgttcttttcctttgtgcatgtataggtaaaacatggaagtaattttgataagacctctatgtactgtctcagacatcaagttaccagaagtccagaatgcagaaacgccagatctttatatgctcaagggtgtttatgtgctagttaggtagcaacgttctctctttttgtatgtataggaaaagtgaaaggaattttagtagaccctaatgtcttgtgacaggcatggtaatttatcaaggttggtttgttctacagtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0121400, RefSeq:Os05g0121400