Os09g0527500

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0527500| Description = Similar to MEG5| Version = NM_001070265.1 GI:115480272 GeneID:4347641| Length = 3812 bp| Definition = Oryza sativa ...")
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Gene Name

Os09g0527500

Description

Similar to MEG5

Version

NM_001070265.1 GI:115480272 GeneID:4347641

Length

3812 bp

Definition

Oryza sativa Japonica Group Os09g0527500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21461359..21465170

Sequence Coding Region

21461634..21461856,21463694..21463770,21463841..21464003,21464130..21464191,21464285..21464363
,21464853..21464956

Expression

GEO Profiles:Os09g0527500

Genome Context

<gbrowseImage1> name=NC_008402:21461359..21465170 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21461359..21465170 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgagagctactggcagtaccagtacgccgccgtcgacccgcgccagcaggcgccggcgccggtgcctgtgcccacgcccgcgctcatgtggcagcagcagcagcagcaggcggggtatcagcccgccgtggcgccggtcgcgcccccgatggctgctccgccactgcccgccggccccccgccgtcgttcaagcgccagcgcccggagtacttcgacatgccttctggacagggaaacagcctcttccacgaagcaatgagcccccattatgtccatcgcttgaacaatcagatgtcctatgctgctggtgctaaccaaagtgctattccacttggtgggatggccacatattcagcaggcatggacagtggaaaccatggcgctacaataactgaatcaagaactctctatgtggaaggactaccttcgaactgcacaaagagagaggttgcacatatctttcgccccttttctggtttccgtgaggtgagattggtcaacaaggagattaggcatgctggaagctgtaacctcttgtgttttgttgatttttcatctcctcctgaagctcgtgctgctctggagactctgcaaggctataagtttgatgaacatgaccatgagtcttccaacctgcgcatacaattctctctcactcctcgcaggaggccaattggtgggcctcgtgttagaaactaa</cdnaseq>

Protein Sequence

<aaseq>MAAESYWQYQYAAVDPRQQAPAPVPVPTPALMWQQQQQQAGYQP AVAPVAPPMAAPPLPAGPPPSFKRQRPEYFDMPSGQGNSLFHEAMSPHYVHRLNNQMS YAAGANQSAIPLGGMATYSAGMDSGNHGATITESRTLYVEGLPSNCTKREVAHIFRPF SGFREVRLVNKEIRHAGSCNLLCFVDFSSPPEARAALETLQGYKFDEHDHESSNLRIQ FSLTPRRRPIGGPRVRN</aaseq>

Gene Sequence

<dnaseqindica>276..498#2336..2412#2483..2645#2772..2833#2927..3005#3495..3598#ctcctcgcgctccacgcgcgcccgcgctcgccgccagcgcgcgctgccccggagcgcgacgacagctgtgtggggggcagcgacagcgccactggcgtcagcaccagtaaccgaagccgcgctcgctggctacaaaacacgcgccccctcctcccctcaccgcggctgcgcacgcattccccattccccattcccctatctctcgaaccctagcccctagtcccctcccgaaccctagcccccaccgcgccgccgccgccgccctcccgatcgcgatggccgccgagagctactggcagtaccagtacgccgccgtcgacccgcgccagcaggcgccggcgccggtgcctgtgcccacgcccgcgctcatgtggcagcagcagcagcagcaggcggggtatcagcccgccgtggcgccggtcgcgcccccgatggctgctccgccactgcccgccggccccccgccgtcgttcaagcgccagcgcccggagtacttcggttcgtgctcgcccacacattcctcctcttcttgattgttaattttgtgttgcctgctagattagtcgtaagaaagtataggtagctttgttgtgggtatccatggggtttagggctttaggctatagaacatatagatgatgatagtggaagctagtctttttttataagcagatcttgttgtcctgaacttttggggttcagggcgagaaaaaatcagaggccttttatttgaatgtatcatcatcagtaatcttaataaattgcaaatatccctcatgtttgaattacagatccagatattatcagttataagtctgaaactctgaataatagggagcagaatcacctggatttttgtgatcttgtagaaaccgaaatatcatcaagaactcgtggaagccaatctcctcaagggtataatctgttagaggactcctaaaaagggaaaacacacacacacaccaactatagaaaatcagtgcaaagctatgagataaaccaaccaaccactcaactcaaggagatcttgctgactaactagagaaactaattattatgaacaactcacaggaatgaggaattcataaccaatcaactctaatggcaatctttagaaccaaaagaaatcaaagttccatcttttttttgtcaatcttctttggggtgttattcaaccctgaagcaaaggagtgagatctaaaaaacttaaagagtacgacatatgcagtggctgaatgacgggattacatgcagcaaatgacacacttaattaggctttagtcatgctagctaacccagcgtagtttcgggaatagataagggtcgaggggaatgagatagcttcgatgcttcgtgacctgcgcagactgatatgcttgttggacatctgctaatgaggcttgggcttccaaacaatacgtgtgtggtctggggccctgactgccctgactcagggccggccttgtgttttccctgccacgctgtactattaacctgtccaaggaaatggtaggagaagttgcaggcttgtagttttgaattgttccaatggtagatgtttgtttgaaatgaatacataaaaatgaaaccattcctcatttcctgataaagcctcaatgtcgtaagatgggaactagtaattttcatatgtgaatctacaagatcatattgattctttgttttctttaaagttagatggtgtagcatggtttatatgatatgttagattgaattaatctctggttaggctaatatttcactatcattggtaggctctaggcaaaaggtttcggcttctattatagagtagtcggtctgactattttgatggctaaatggtttgtaaattctgaaatctaaaacaagagaaaaaaaaaggaatttgttgtgtaaaaaggttctaataatctctacaaaggaatttgctgcttgcatgccgttacgttgtttgccgccaattctgaatgcatctatcatcacaacaataaagtttagtccttttttagtatcattttattgggaaaatgattgcttgctatgcacagctacctgaaactatgtatcaggattgcctacctgcacatagatttggcggctttttagttgttagataatgttgtaattaccgcacatcattaattcttcacatgtttgcttctattgcaaccccatttttgtcatagcttgcttcttaaatggacagggaaaaaatattgacgagactgttcagtagtttcttcctaatgtattttctccaagtgagatgttcatttgtttcagtcaaaaaaaaaagatgtgcatttgtatattttaacactttacactttgtttgcagacatgccttctggacagggaaacagcctcttccacgaagcaatgagcccccattatgtccatcgcttgaacaatcaggtattatatcaattataagcttgttaatttgaggatagcaactttcttactaacatagtgctggttgcagatgtcctatgctgctggtgctaaccaaagtgctattccacttggtgggatggccacatattcagcaggcatggacagtggaaaccatggcgctacaataactgaatcaagaactctctatgtggaaggactaccttcgaactgcacaaagagagaggttgcacgtatccttttctatgcttgtaaactaaaatcacattttcctagctataattagtgtaggtatcttttgcgatgtaattcatattacacctcctaggtgcttttgcccttaactctttcttctgcagatatctttcgccccttttctggtttccgtgaggtgagattggtcaacaaggagattaggcatgtaagttaaatgctacctgtgaaccaaattttccctgttattttttgcaaagccaagcatgcttacatgtcaaatcccctctctgttttgcaggctggaagctgtaacctcttgtgttttgttgatttttcatctcctcctgaagctcgtgctgctctggagactctgcaaggtaattataacatcatattttctgcatccatatgcattgtagttatgttgccaatttcgttagatagtgcttgcgcgcagtttcattcttttatgtttgtgtgcctttagtcttattaaaaatctgtttatttttcttaatatttttccctttgtcccacatccagtaggttttagtgtgatgactgaactatgtagagtgtagtccatagataactaaactaagattattattatttttttgctgaaaactaagattgttatttcgaaatatcataatttttccttgttccactttgaaaccagcttactgtcattctatgtgtgctatatcatatgtaataatatttgtgtgcacatcaactttagtgctttccatcataaaactagacgtttcattggtagggagagaataaactttgagcttctaatacttgttcaggttataagcttgaatttggctctgaaactatgacgttttgctttgcaggctataagtttgatgaacatgaccatgagtcttccaacctgcgcatacaattctctctcactcctcgcaggaggccaattggtgggcctcgtgttagaaactaagtttcttgggtggagttgaattaataatgcagagcaaaatttgtggagaatctctagggagacttgtatacaatgctagaccaaacttgactctgatgcaccgttagtgttgtatgttgttgctttgcaaagattctgccgtgtaggttggtatggatgtgttgataactattggttggatggaaacaaagtagatggggctgaaaaattgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0527500, RefSeq:Os09g0527500