Os05g0122600

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Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0122600| Description = Prefoldin domain containing protein| Version = NM_001061040.1 GI:115461810 GeneID:4337660| Length = 4949 bp| Defini...")
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Gene Name

Os05g0122600

Description

Prefoldin domain containing protein

Version

NM_001061040.1 GI:115461810 GeneID:4337660

Length

4949 bp

Definition

Oryza sativa Japonica Group Os05g0122600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1218343..1223291

Sequence Coding Region

1220022..1220041,1220839..1221013,1221422..1223038

Expression

GEO Profiles:Os05g0122600

Genome Context

<gbrowseImage1> name=NC_008398:1218343..1223291 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1218343..1223291 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagacttcaaaaaccaggaatgggccttcagatgccccacagaaggcttctccggcaacaccacggtcatctcgggtggcgaaaactggagggaatgaaactgactctgcagggatcacaccaacaagaaccactccagagaggagccctaaggtcaccgagcgtcggtcaccacgaagcccaattactgagaagcgcccaagtaggctgtccgagttggagtccagggtcagccagctgcaagatgagctgaagaaggccaaggagcagctgagcttatcggagtcacgaagacgccacacacaacaggaagcagaggaagcaaaaaagcaggagcaggctgcaacctcaaagctcgaggacctacagcgccagcttgccgagttctcagctgcggaggagtcccgactccaggaactgcggaaggtctcacaggagcgtgaccgtgcttgggagtctgagctcgaggctgtgaagaagcagcagtcagtggattcagctgctctgagctcagccttgtctgaaattcagaggttgaagcagcagctgggggccaccacagagtctgatgcagctcgtgccaagcaatgcgagtttgcggagtctgagctcgagggcttgaagcaggagatggagctccggcttgcgaccatcgagggcctgaaggtaaacgttggcgagagcgacaaggctgtagctgaggcgaacgcggtggcagctgagaccaagaagcagcttgagatggcacaagctactattgactcgctgcttgctgagggtgcccggttgcaagaatgcctgaggtcgaaggacgcagagctcggccagtccatggctcgattagccacactggaggaagatctgaagaaggcacataacaaggatgatgttgatggcagctttggcagccctgatcatggtgaagctgtggagaaggtggtggtaactatccccaatggcaatggcagctgtggtggttctggcgcagagattgagcagctgcggacggcgctcgaggtggctgagattaggtaccaggaagaacaaactcgcacgacgatcgagacgaagaccgcctacgaaatgctggagaatgccaagtcagagtacgaccgcagagtgcgcgatcttgagctggagctgaagagcaagaacgatgagctcactgaagcgaaggccactttggctgtcaggtgtgacgggaagagcgatgtgatgcagccagagcttgaggcgaagctgatgaagtcgatcaccgatgcgacggagctgaaggcgagcctgatggacaaggagacggcgctgcagagcgtgatggaggagaacgagacgctcaagtcggaggcggggaagaaggcggcggaggtgcagcggaggtacgaggcggcggtggcggagctggagctggccaaggcggcggagcaggacgtccggatgcggctcgggtacgtgacggaggaggccgacaagagcagccggcgcgccgccagggcgtcggagcagctggacgcggcgcaggcggccagcgtcgagatggaggccgagctgcggcgcctccgggtgcagtctgaccagtggcgcaaggcggccgaggcagcggcggcggcgctgggaggaggcggtggcggcattggcaggaacgtggagcggacggggtctctggagccggcggagtacaccaactccatgatcggcgggaagctggcgagctcgccgttctccgacgagccggaggaggagtcgccgaagcggcgcaacagcggcgtgctccggcggatgagcgggctgtggaagaagagccccaagtga</cdnaseq>

Protein Sequence

<aaseq>MQTSKTRNGPSDAPQKASPATPRSSRVAKTGGNETDSAGITPTR TTPERSPKVTERRSPRSPITEKRPSRLSELESRVSQLQDELKKAKEQLSLSESRRRHT QQEAEEAKKQEQAATSKLEDLQRQLAEFSAAEESRLQELRKVSQERDRAWESELEAVK KQQSVDSAALSSALSEIQRLKQQLGATTESDAARAKQCEFAESELEGLKQEMELRLAT IEGLKVNVGESDKAVAEANAVAAETKKQLEMAQATIDSLLAEGARLQECLRSKDAELG QSMARLATLEEDLKKAHNKDDVDGSFGSPDHGEAVEKVVVTIPNGNGSCGGSGAEIEQ LRTALEVAEIRYQEEQTRTTIETKTAYEMLENAKSEYDRRVRDLELELKSKNDELTEA KATLAVRCDGKSDVMQPELEAKLMKSITDATELKASLMDKETALQSVMEENETLKSEA GKKAAEVQRRYEAAVAELELAKAAEQDVRMRLGYVTEEADKSSRRAARASEQLDAAQA ASVEMEAELRRLRVQSDQWRKAAEAAAAALGGGGGGIGRNVERTGSLEPAEYTNSMIG GKLASSPFSDEPEEESPKRRNSGVLRRMSGLWKKSPK</aaseq>

Gene Sequence

<dnaseqindica>1680..1699#2497..2671#3080..4696#gcataaacgctagctcgtccactctcctctactagcagcagcagtagaagacaacacacacgcagcagcagctgcagcaaggcagtaggagaggagttggagggaggagagggagctccaagaatcaccagagagcgagcaagagagaggtgaggtgagaatggtgttgcttttgatttatatgccctgcttctgtttgcggaaatgcgtgtgtgcttgcagtattgtcttgtggggttgtttcttgggttctttgtatgtatggaccatggccattgttgttgtaggaggaggaagaaagggtgagagctctcatggttgctgggcttctccatgtccatggcgtgtttcaatagctagggataaagatcaagaaaggcttcttcttgctagctccttttgcattgcatcccttttgtttttcctgcactctttgtttcatgtctcgttgtttatttggtttgaggagtaagttcattcctttccttaaaaaaggttcattccttttgaatcctcttcttttctttcttctcattctcatcttgttcttgcaaaccgcaacctgagaaagagttagcaataaataccctttaatactgttaatagtagcactagaaatccggtgctttaatccgaaatacaatggcgttgccgttactgcaagaaatgcagataagtttcagtttttaaaacgtttaaagctcccatatttttagctgagagcatgaatcacgctgcttgcatctgtcaggtcctcccatcactccatctgcaatgaattttaatcctttggccgctcaggttcttgccacatgaatgcattgcttcactgaaccagctacaaacatgggcaaacacatttcaggatctagacccatggggatcacaaattcacaataatggcagaatggctttaccaccagcacacacacagggccttctctgtaactgtgcaagtttactgcagccttcttctcactttgaatttttgaccctccctttctttactttctgctatgtgctattgctccattccatgtaaggctgctattattattcccctcttgagagagaatgaccattctagcccatgctgttcatcttgatggtgttggatgaatcaagggcagtttggtattcctgcaattttttacatttgttgtgtgaatgggttcctgctgtgtttgccggattcctgctgccaaaggccattgggggtccttgtggttgtggctgtgggcaactaggtgcactgttacctctgcctgaggttacaggtgtgagaagaaatgtagtgcacattactttcctttcatctttcttggtctgtaaaaatttcaaattagtgggatcctatgccattttattaagtactggctttgctactccatagctttccaaactgttgtttgtttcttctaaaaaaatgcctatgctaataacctgtaccttttgatacggtaacagtacaatttcaccactgtactttgctttttcttgcatttaaagtttgcaatttgcaagtgaaatgtcaaccagataatcttgtgttggcgtacatgtttgagttgtaattaacttgcaactttgtttttttattacttacctcatgagttctttcttctttctttcttgcagaagtaaggtgagctcagaaggatttggtaagggatctcattatgcagacttcaaaaaccaggttagtttttttgtcctagaactttcatgtatcttgcctcttgctcttgttttcgcagcaggtatgcagttctgctcatgcatgtgcgtgtctgagacagtggttacaccatgaccagacagtactaagtagtatccaaggttgtgtgtattaaaatggatctgatgtagggggggccattgcagattgaattttccatgaattgttacttgccaaatataccataaatcttacaatgcactagtgtacttgatctttgctaagtattaggccttttcttttggaagatcattttttttcatcggtagcaacttagaacagtcaaaatgagaacattcctgtgcttatttactagtattaccttgcatgttgctggatcttgtacacaaccaagtgaaggttgcctactggtgaaatagtttttggatgtactactcttgattagtcttgtgtaagccaactgttttctcagattattgtactgctcctgttatcaatctcttcatcatctggcatgtgaactaatagatctgtatctaaaaaaatccgcactaatagatggtatttgaaaacattgtcttcaaagttggtatatcagtacactcggttgttcaacaacttcatgcttagtgtactgtttgcggttaattacagtacttacaatcattaaacttctgtttccctcaatacctctattgttgtttttttttttgcggggaatacctctattgttgttgttagtctgttgatcttcaagacaattagataacatgttttttggctattgatttgtgtaggaatgggccttcagatgccccacagaaggcttctccggcaacaccacggtcatctcgggtggcgaaaactggagggaatgaaactgactctgcagggatcacaccaacaagaaccactccagagaggagccctaaggtcaccgagcgtcggtcaccacgaagcccaattactgaggtgctgatatgttttgcaggcatcgcgtttacttcactacttggtggattcttagaagcatattttttttttaagaagtgcacctcaaattctcataagatgtttcaacaccaaaactctgcatatttcattattctgcaatggctttgggcaagcaagtgaacctttagcacaacatacattttgggactgcagatttatttatagaaatgatatgttcagacacaaattctgaatatttcattaacctgtaagcaagcaagtaatataatgatggtgattgacttcagaaaccatttagcacaggaaaaatacatgttcttttgtcatgtggttttctttatttgatttagtaagtgtaaattttcttaaatgggtattcgctgaacaatttgcaccctgttccagaagcgcccaagtaggctgtccgagttggagtccagggtcagccagctgcaagatgagctgaagaaggccaaggagcagctgagcttatcggagtcacgaagacgccacacacaacaggaagcagaggaagcaaaaaagcaggagcaggctgcaacctcaaagctcgaggacctacagcgccagcttgccgagttctcagctgcggaggagtcccgactccaggaactgcggaaggtctcacaggagcgtgaccgtgcttgggagtctgagctcgaggctgtgaagaagcagcagtcagtggattcagctgctctgagctcagccttgtctgaaattcagaggttgaagcagcagctgggggccaccacagagtctgatgcagctcgtgccaagcaatgcgagtttgcggagtctgagctcgagggcttgaagcaggagatggagctccggcttgcgaccatcgagggcctgaaggtaaacgttggcgagagcgacaaggctgtagctgaggcgaacgcggtggcagctgagaccaagaagcagcttgagatggcacaagctactattgactcgctgcttgctgagggtgcccggttgcaagaatgcctgaggtcgaaggacgcagagctcggccagtccatggctcgattagccacactggaggaagatctgaagaaggcacataacaaggatgatgttgatggcagctttggcagccctgatcatggtgaagctgtggagaaggtggtggtaactatccccaatggcaatggcagctgtggtggttctggcgcagagattgagcagctgcggacggcgctcgaggtggctgagattaggtaccaggaagaacaaactcgcacgacgatcgagacgaagaccgcctacgaaatgctggagaatgccaagtcagagtacgaccgcagagtgcgcgatcttgagctggagctgaagagcaagaacgatgagctcactgaagcgaaggccactttggctgtcaggtgtgacgggaagagcgatgtgatgcagccagagcttgaggcgaagctgatgaagtcgatcaccgatgcgacggagctgaaggcgagcctgatggacaaggagacggcgctgcagagcgtgatggaggagaacgagacgctcaagtcggaggcggggaagaaggcggcggaggtgcagcggaggtacgaggcggcggtggcggagctggagctggccaaggcggcggagcaggacgtccggatgcggctcgggtacgtgacggaggaggccgacaagagcagccggcgcgccgccagggcgtcggagcagctggacgcggcgcaggcggccagcgtcgagatggaggccgagctgcggcgcctccgggtgcagtctgaccagtggcgcaaggcggccgaggcagcggcggcggcgctgggaggaggcggtggcggcattggcaggaacgtggagcggacggggtctctggagccggcggagtacaccaactccatgatcggcgggaagctggcgagctcgccgttctccgacgagccggaggaggagtcgccgaagcggcgcaacagcggcgtgctccggcggatgagcgggctgtggaagaagagccccaagtgaccatcgacgccatggacagcttggtgtggtgtgtgtactagaaagaactgaaactgactagctaggctgagctgatctgatcacgccatggatgggtttagctgcaaacactgtgaatcaaagctagttaagttaattactactggttggttagttggttttgctgctgtggtcgcagtaaaaaaagaatgttaagaactcttgtaatgatgttggagatgaggagcatctacattttgggctgcatgctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0122600, RefSeq:Os05g0122600