Os05g0123100

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Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0123100| Description = Glycosyl transferase, family 43 protein| Version = NM_001061045.1 GI:115461820 GeneID:4337665| Length = 6207 bp| De...")
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Gene Name

Os05g0123100

Description

Glycosyl transferase, family 43 protein

Version

NM_001061045.1 GI:115461820 GeneID:4337665

Length

6207 bp

Definition

Oryza sativa Japonica Group Os05g0123100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1257249..1263455

Sequence Coding Region

1257563..1258236,1261383..1261668,1262951..1263106

Expression

GEO Profiles:Os05g0123100

Genome Context

<gbrowseImage1> name=NC_008398:1257249..1263455 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1257249..1263455 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacggcggcggtggcggcggcggagaggccgaagcagcggcggagcagccacctgtggaagaaggcgctgctccacttctccctctgcttcgtcatgggcttcttcaccggcttcgcgccctcgtcgtcgtcgtcgtggcgggccgggagcggtggcggtggcggtgtccagccgcgccaccagctcgcggcgtcccacgtcgcggtgaaccagcaggtgagcctggtgccggatgcggcggcggcggaggcggccggggtcgggaacggcgcggtggtggacgtgggcgacgacgaggggggcgagggggcgaggcggatgctgatagtggtgacgacgacgcggggggagcggcggcggcggcgcggcgagctgctgcggctggcgcacacgctgaggctggtgaggccgccggtggtgtgggtggtggtggagcccgcggcggacgcggcggcgacggcggaggtgctgcgcggcacgggggtgatgtaccggcacctcgcgttccggcccgaggagaacttcaccaccgccgacgccgaggcgcacgcgcagcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacgcccatttcttcgacgagatccgccagatcgaggcatttggcacatggccagtggcaacaatgtcggcaggcgagaagaaagtggtagtcgagggcccgctatgcagtgactccaaggttgtcggttggttctcgagggacttcaatgatgggaccacccgtgcagtgacatataacacagaggcggacttgaatcctgctggtgctgctggcacgcgagctcacacgattgacgtctcagggtttgcgttcaacagttctattttgtgggatcccgagcgttggggcaggccgacgtcattaccagacacttcacaggattccatcaagtttgtgcaagaggttgtattggaagacaggaccaagctaaaggggattccctcagattgctcccaaatcatggtttggcaatatactatgcccatgcaagttcatgcccaaacctctactccaaaaactcacaatagaaggtag</cdnaseq>

Protein Sequence

<aaseq>MGTAAVAAAERPKQRRSSHLWKKALLHFSLCFVMGFFTGFAPSS SSSWRAGSGGGGGVQPRHQLAASHVAVNQQVSLVPDAAAAEAAGVGNGAVVDVGDDEG GEGARRMLIVVTTTRGERRRRRGELLRLAHTLRLVRPPVVWVVVEPAADAAATAEVLR GTGVMYRHLAFRPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFF DEIRQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEA DLNPAGAAGTRAHTIDVSGFAFNSSILWDPERWGRPTSLPDTSQDSIKFVQEVVLEDR TKLKGIPSDCSQIMVWQYTMPMQVHAQTSTPKTHNRR</aaseq>

Gene Sequence

<dnaseqindica>315..988#4135..4420#5703..5858#atctctctccatttctccccatatcttgattgagcttgttgagattccccatgcacattcctccctccatttccaccaccaccccaaatcttgttgggtgatctatctatctatcatcttcttgtaggagtactagtggagtttgttgatcttcacccccaccaccattaatggctgcaaagcttcactagaggaggaggactagtagtataccatcttcttcttcttctagcttgatctggtgctccattggtggtgttggtgcatcttgatctgggattctggggagaggttgagtgaatctttgggcctccatggggacggcggcggtggcggcggcggagaggccgaagcagcggcggagcagccacctgtggaagaaggcgctgctccacttctccctctgcttcgtcatgggcttcttcaccggcttcgcgccctcgtcgtcgtcgtcgtggcgggccgggagcggtggcggtggcggtgtccagccgcgccaccagctcgcggcgtcccacgtcgcggtgaaccagcaggtgagcctggtgccggatgcggcggcggcggaggcggccggggtcgggaacggcgcggtggtggacgtgggcgacgacgaggggggcgagggggcgaggcggatgctgatagtggtgacgacgacgcggggggagcggcggcggcggcgcggcgagctgctgcggctggcgcacacgctgaggctggtgaggccgccggtggtgtgggtggtggtggagcccgcggcggacgcggcggcgacggcggaggtgctgcgcggcacgggggtgatgtaccggcacctcgcgttccggcccgaggagaacttcaccaccgccgacgccgaggcgcacgcgcagcgcaacgccgcgctcgcccacgtcgagaagcaccgcctctccggcgtcgtccacttcgccgacgccgccggcgtctacgacgcccatttcttcgacgagatccgccagatcgagtcagtacatccatccatccatcccatttggtttctcacttttcttttttcttgcttgattactaggagtatactttcttcgtttatagattgcaaattggaatgtgtgctaatccgaatgcttcttgattgattcttccatgttgatttctaacctcaaaggttgaacctctcacaatttttgcttgattattaggagtgctctttcattttaggttgcaaattgtggaatgtgctaatccgaatgcttcttggttgattcttcctgttgatttctaacctaattgtttttttctaagtttttcaattcaatttgagttcttttcgatccccatttcttccatgtccatgctgttcttcagggagttgaatctaggaaagaaaaccttcaaattcaatccatctaggtcatacgttttagatttttttttccttttcagatgtccaccacctactagggcttctcttaactaatcaccacttcttaatttggtaaatttactcaagccaataaaattttagtagccgtgtggttcgttgggggaagtatcattaaaggcacaagctgtcattagtggaggagaattagagtaggttagtgtgtgttgtacctatatgcttttatcatcatcttgtgcacaatactctgatgtgagccagggagtcaattattggatctagctttacaccttatttattccatttctcccaacaaactagtatgcatctatgcttcttttgaagattgaagatctcttgcttttgctcacccccaacaaccaaatatgttgcaaccactccaattagtttaattaagaccttcaacgtgcctgtggctcatgagccatgagcaaagcaaaaaactattaaaaatgtgcaaaaatgattagttaacagtgcttgcagtacaactagctgtttgcccaccgacgtgtgggcccatccctgtgcaacctaatgttagaaaatgcatggtgaatcacacatcactctccctatagcatgaactgaatgttgcatttctggtgctccccaaagtgggtagcaaaatgcaggaagaaatttgcttgaacacaattttggcagaaaatagtaaccttatgttaggccatgaccattgaactcccaataaaaggaggccccatccccaccatctgttgctttctatggccttgaatggccatttcatatgcagaacgagatctgcccaccgtttcggtgtagagttttccggaatggcgtctagttgccgtcttggattcggttggagtcggcagaatggttggtcatcgagattgtgcttgatgatttttcttgttcatacttgaataattgcaaagaaggaaaaaacagcaacattttttggctggcagtttgatgttgaacattgttttccttccatgttagctgtactccagtattgtgatcttgcagccagagaatactactatcatgtccaattctgtttgctctgagcctctcaaatccaggtcaaatctttcttctattttcaattagacctgattcaacaactggcggaaatgcctgacgtttcaccttgcctcttatctttttcctatccagctaaaatatgctaaaaattgctgttagtcctataatgtgatcctcaccttatcatcatttcttccaaactagaaatgcatggctctgaaacatttgacttgccttttgcctttactttttcaatagcaacatccaaactttgatgagtagtactactacatccgtcccatattacttgtcgctttgagattttgtttgtaatatttgatcattcgtcttattcaaacacatttggaattattatttattttgtttgtgacttgttttattatcaaatgtcctttaagtatgatttattcttttctatatttgcacttattttttaaataaaacgaatggtcaaacgttacaagaaaaaagtcaaagcgacaagtaatatgggacggaggtagtaccacgttcagtacttgccttgataaagaaaagatgtgtacactttgttcagtactatggtactaccactactgctcatatcatgtgagtgaatagtggtaatattcccaggaagaacatagcttttgtgttgaggggaacatgttgagattaaagcgctcctcttttttccaaccaaacttttgtgcatcacttcatcaacccatagtgcttagtgcgcgcacatcagcaacaaatgtggcgcttgggcgtcaaccaagcacatcccagagctactagcatcgtcacattgcatatattcttcgttgccttgttaacagttcgatacgacctgggatgtgtcacagaatttaccgcttaatacaaatgaggaagtgcaagtgtgcaatactgtgttctcaccacactccgcgcacattttggggcatgggttttgaccgtggttaccatacctgtttacttggaattagagttcgagagttcttttaacttgagaagctagaatttgtgtactgtttatccaaagaagcttcgttaaccgagttgagtttgttaatcatattgcagatgacctgaatacatgctcaataaagttttgcatccatgttaacggtcgcctcgtcccatagcttgttctgtctagtttttttagccctttcaaactttggaatttgaatccatttaattcaatatttgtcacttgtccgcatgtatgggcaagtggtggattttagtctattcccacgtatgttgaggcagttgcatgcatgcaataactcaccttgtgttgtgttccatgcctagtgtctagtgatggagatgggtgacaaaaaaaattagcataatagtagtactagattttatgatggaatgaagcatgtggaagatatttcaatggagttatggtgacatattctccttaaaatatctcagtttgagtgaagcctcttattttcaaatcaaacccaattaacccatgtgtgcttagtgtcggtggatgctaattctagtcaactggcactgtactctgtctaagaaagatgagattgatgtcatcacaaataattcatgcatttcatctttgctggtgcatatttgtgtaattcttacttaactatatgctactacggtatatgtatgttctattctctaactgttaacatgtacagggcatttggcacatggccagtggcaacaatgtcggcaggcgagaagaaagtggtagtcgagggcccgctatgcagtgactccaaggttgtcggttggttctcgagggacttcaatgatgggaccacccgtgcagtgacatataacacagaggcggacttgaatcctgctggtgctgctggcacgcgagctcacacgattgacgtctcagggtttgcgttcaacagttctattttgtgggatcccgagcgttggggcaggccgacgtcattaccagacacttcacaggttagttcatctccaatcttgttgtcaaattgatcaagctacactgcattttagtaatagcatcacacattctgcaacacttaattggactatagcactaaacgtaataaatagtatgcaaattgaggaagatttgattggatctgagatcacaatagttttaggctgtccacatcatgatagccaaatagtgaacctcctaaaacagaggacccataattgaaaaaaccgtgtatttggaagtttgaaaggagaaggatcgtataactaaacacttatacttgcagaacagtaacagatttccccagagctgaaaatcaacagcagatttgatttcttctaaaaaacatgtgatggtcaaattttcagagctgttaggaaattttagtttgaatagattcattaattttggttcttaccttgaggggagggaatatcatactttctgaaacccaagatctttcttacagacaaacttatgtagaaaagactctcccactaaacaacttaaatagatatattaatttaggttcttaccttttggaagttgcgcatttcataacaaaaactgagttcattcttcctattgataaaaggacatttataattcggaaaagatgaattatctgaccggctgatttcattataaattatttcgtaatcatacagatttttctgagttgatttgaccgccctagtgttacgcaattatcgacttcactttctatggaacatggtgtgcaacagttggcaatcagatgctccaccatcactttcatgcattcttttcttaaacttcagatttttatcttgttcaagtcacctactgacctactggtcacatccttgagctgcatcccaccagtgatactgattactgaaagctacattgccattaaaccataacatatctacaccgactgctgattataacaagataatcgagcccttcgattactcatcgaacttcttgccctccagttgaattacgctacaggctagttgcaccagaaagatcctaattcgtaaccacatcaagtttgctacaatcctagacttgcaaggaatgtgtattgatacaaaacttgtgagcttcattctgaattatgagctgatgctgatggtattatacttttcttgcacttctcataagccagaaacagttctttgaaggagacattcggaataataatttgcttaccattcccgcatcaatgcaaccaaagttaaatcttccttctcccaaataataatggatatacttttcttgatgtgattgcaggattccatcaagtttgtgcaagaggttgtattggaagacaggaccaagctaaaggggattccctcagattgctcccaaatcatggtttggcaatatactatgcccatgcaagttcatgcccaaacctctactccaaaaactcacaatagaaggtagggagagaacaagcaagaggattctccagaaagggaaaaaagtgggaagttgatgtaaatgtggtgaaaacaaaagaaaaggaagaaggttgtttacactgagtttttttccctttctttttctctcatttttgttttctttttagtttggggggccatgaattgtctgcggaaaatctccccccaagcaatagtatttattcagattcacttgtgattctttaactctgctcctctcatcttcatctcatctcatctcctgggtaatcttttgtgagggggatgttgcttcaaacaaattccccttgtggattgcaataatacactgtagaaatgtgggtgaaaatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0123100, RefSeq:Os05g0123100