Os05g0123400

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Revision as of 10:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0123400| Description = Conserved hypothetical protein| Version = NM_001061048.1 GI:115461826 GeneID:4337668| Length = 1755 bp| Definition ...")
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Gene Name

Os05g0123400

Description

Conserved hypothetical protein

Version

NM_001061048.1 GI:115461826 GeneID:4337668

Length

1755 bp

Definition

Oryza sativa Japonica Group Os05g0123400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1278489..1280243

Sequence Coding Region

1278714..1279859

Expression

GEO Profiles:Os05g0123400

Genome Context

<gbrowseImage1> name=NC_008398:1278489..1280243 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1278489..1280243 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggtgccgcttcctcaacatcgccaccggcgcctgcatccaggtcgacctcccggaggagctcgccgccggcggccagatccagatcgagtgcaggaccgagggcctcctggtccttcgcgacaaggtgaccgacgccattcgactcctcaatcccctcacaaaagccgtcaccgatctcccacccatcaccgccgccatggcaaacgtgatccctgagaaacgtgtccatgccgagatcccgtggtcgctgattgcctacgccggcatctccgacgagacctccccaccgaccgtcgctattttcctgagagacatgcggttaaacatcgcgtacgccaaggccggcgaccgccattggaagctcctcgacgacaaagcttggtcgaccttcccaagcagcatcagccgtagcgacggccaacaactccggtatgtcaactacctgtccgtggtgacgctccgtggccgcatctacttggtgacataccaaggtaacatattgaagctaagcattcgtcctaggccccagctgatacccatcgtcaaggaccagaccaaacattcgatgtggcacggccgagttctgtgccccaacgtggtctcctaccttgtgccgcccaacgacgacgatcaccgtatgctcatggtgcgctattacggcgacctcacccacctcacagatcacgagcagaggtgcatcaagcgaaggaagaagaacgacttgatcaagctgcccagcaaaaatccatgccggtacaattggcgaatactgcaggtgttcgaggtggacatcgtcaggaagaagctggtacgcgtggacggcatcgccgacgaccgggcggtgttcgtcggcgatgtggcgtgcgtctcgctctctatcgacaggttcccttccatccttggcaacacggtgtatcttgggatgaacagctgctgcgctgtgggctttggcttgtgccacctcaaggaccggactgttgagccgcggctcgagcatgtcctcgaaagtgggcgcaaggcgccactccttgttgatatcagcctcttccacctaggaaggattgtgccctttgcacgcccctgcactcttgaagagtaccttgtatgcagcgtcggcttcaagaacgggatcaaagattga</cdnaseq>

Protein Sequence

<aaseq>MRCRFLNIATGACIQVDLPEELAAGGQIQIECRTEGLLVLRDKV TDAIRLLNPLTKAVTDLPPITAAMANVIPEKRVHAEIPWSLIAYAGISDETSPPTVAI FLRDMRLNIAYAKAGDRHWKLLDDKAWSTFPSSISRSDGQQLRYVNYLSVVTLRGRIY LVTYQGNILKLSIRPRPQLIPIVKDQTKHSMWHGRVLCPNVVSYLVPPNDDDHRMLMV RYYGDLTHLTDHEQRCIKRRKKNDLIKLPSKNPCRYNWRILQVFEVDIVRKKLVRVDG IADDRAVFVGDVACVSLSIDRFPSILGNTVYLGMNSCCAVGFGLCHLKDRTVEPRLEH VLESGRKAPLLVDISLFHLGRIVPFARPCTLEEYLVCSVGFKNGIKD</aaseq>

Gene Sequence

<dnaseqindica>385..1530#actgcaccgattcttcttgagaagaagatctgaagatgaagcaaacccgtagcagcctccttgcagatgatgaagatcgcccgagatggttgaagaagcgcagatgcgatctccaccaatggcgagtcccgttttccacaccatttatctcctaaatagtttccgatttgtaatcgatcgatcggtactcactgtggcaggagtgatttgccatcggagctgaccgaggatattgcaagcaggctgcttgggtacgatgtggcagagtaccttcgcttccgcgccgtctgcaaggcgtggagggagtgcaccccccacccgcgcgaactcgacagccgcttccgcccgcgccgctggatcctcctctcctccacctccggcgacatgcggtgccgcttcctcaacatcgccaccggcgcctgcatccaggtcgacctcccggaggagctcgccgccggcggccagatccagatcgagtgcaggaccgagggcctcctggtccttcgcgacaaggtgaccgacgccattcgactcctcaatcccctcacaaaagccgtcaccgatctcccacccatcaccgccgccatggcaaacgtgatccctgagaaacgtgtccatgccgagatcccgtggtcgctgattgcctacgccggcatctccgacgagacctccccaccgaccgtcgctattttcctgagagacatgcggttaaacatcgcgtacgccaaggccggcgaccgccattggaagctcctcgacgacaaagcttggtcgaccttcccaagcagcatcagccgtagcgacggccaacaactccggtatgtcaactacctgtccgtggtgacgctccgtggccgcatctacttggtgacataccaaggtaacatattgaagctaagcattcgtcctaggccccagctgatacccatcgtcaaggaccagaccaaacattcgatgtggcacggccgagttctgtgccccaacgtggtctcctaccttgtgccgcccaacgacgacgatcaccgtatgctcatggtgcgctattacggcgacctcacccacctcacagatcacgagcagaggtgcatcaagcgaaggaagaagaacgacttgatcaagctgcccagcaaaaatccatgccggtacaattggcgaatactgcaggtgttcgaggtggacatcgtcaggaagaagctggtacgcgtggacggcatcgccgacgaccgggcggtgttcgtcggcgatgtggcgtgcgtctcgctctctatcgacaggttcccttccatccttggcaacacggtgtatcttgggatgaacagctgctgcgctgtgggctttggcttgtgccacctcaaggaccggactgttgagccgcggctcgagcatgtcctcgaaagtgggcgcaaggcgccactccttgttgatatcagcctcttccacctaggaaggattgtgccctttgcacgcccctgcactcttgaagagtaccttgtatgcagcgtcggcttcaagaacgggatcaaagattgatattattgtcaaagcctcactgctagctgatgctaattaagaagcttattactaccactactatttattgttagtaagtgtagttggttaatttactctttgtatgtatggctgactttgatatggttttagattgtaatcttatttatcagccacttggtttgaatatttatgtccctccacaagtcagtccatcaattgttgtccttaatttgcatctttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0123400, RefSeq:Os05g0123400