Os03g0287100

From RiceWiki
Revision as of 19:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0287100

Description

Phosphatidylinositol transfer protein family protein

Version

NM_001056312.1 GI:115452352 GeneID:4332482

Length

2378 bp

Definition

Oryza sativa Japonica Group Os03g0287100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9955294..9957671

Sequence Coding Region

9955439..9955531,9955624..9955746,9955841..9955936,9956014..9956181,9956275..9956353
,9956589..9956617

Expression

GEO Profiles:Os03g0287100

Genome Context

<gbrowseImage1> name=NC_008396:9955294..9957671 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9955294..9957671 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcgcatatccaaacagcaggacagttatcagtgcccgctttttagcaagtgttcactgaccatcgacactgtgatcagacctgacaatggctgctctgagaacgcccacaatttaaccagtgaacaattagctgcaagagaggtagaggtcgtcgacatcgcgttgcagtcgagggactactggagcaaggtgatcagcgccccaaacgtcgacctgacagccttcaggtcgcagaggacgagccgaggccctctcttgaagggttggatggattcatgccgtcccgtcatgaccacgtacaagctggtgatcatggacgctccgatctggggcttgggtgaacgcctggaagactgcatcatcgcgggggagagggcgctgttcttggcgtgccaccggctgtgcttcgcgtggatcgacgagtggtacggcatgacgttggatcagatccgagagatggagcgtcagaccgacctgcttctcaagaagacgctgaagaagcctgcgaaggccgggagcaagcacgatggcaagaggaagacgctcaaagaggagattgtagctgtcgggagctgcacgtag</cdnaseq>

Protein Sequence

<aaseq>MVRISKQQDSYQCPLFSKCSLTIDTVIRPDNGCSENAHNLTSEQ LAAREVEVVDIALQSRDYWSKVISAPNVDLTAFRSQRTSRGPLLKGWMDSCRPVMTTY KLVIMDAPIWGLGERLEDCIIAGERALFLACHRLCFAWIDEWYGMTLDQIREMERQTD LLLKKTLKKPAKAGSKHDGKRKTLKEEIVAVGSCT</aaseq>

Gene Sequence

<dnaseqindica>2141..2233#1926..2048#1736..1831#1491..1658#1319..1397#1055..1083#ccctgttcgatcagacgatcactgaaccattccccggagaagagggagatagaagcaaataagctcttcatttccctctcaagagcagctcatcgaagctgtcagatttggccattatcggtgcaaattcagagatggttaagatcaaggaattgtatcctactagttcttgtgtccatggattttttttttcttttctttgctgtgttctttttctgtcatttttgggtgatcatgtgccatctgcttgaacttgggcatgccttgacttcaatctttcaccaagccggatcgtcgtgcctatgtcgatggaagaggtatggagaagtagtgtggcaaaaggaaaattttcaattgaaggctttgcattcttgtggttcgagcaatttggtaaatggactgatcagaaccgatcctttcgttacagtatgaaatagggatcagctacaccatcatgaagatggagcagcaaaacacgaacagcaaggagggcgtcgaggtgctgcaacaggtcccatttgaggatgagaagcttggcaagggccaatacacctcgaagaattatcatttgcagaggttagtttgttccgtgccagtcctgctgatggatttcagaagtttaattcaatcaggcaatattaaattgtttcagaaaatatgttgatcctcaaggcctttcagaagttcctgatcaattgtagtcttgaatcttgataagaataagcatgtcatgttaattacaagaggttagatctcgtagctactgaaagcagataggatcataggaagtgttcatccaagaacagaaggaagaacgaggttgatcagtagtagaaaggagtaacatgtcgaacattgcagatgtaaagacttcaagttattgtcctaattaggagcatgcattaccttctttcctaagttaagcaatgcatgctgatgtgtttcaccgaatgctagttcttatatacaattaaatgtaaaaattatgcagcaaaattccatcttggatgaaaggttttgcgccagcaagtgcacttaccgtgcatgaggaatcatggtgcgcatatccaaacagcaggacaggttagcaaagacctttcgctattaaagtgcagcagtcgtgttttaataattgatcattcttgctaaacaagttccatttggattccccttctctgtgttcatgtggccatgatttctactccgaccctcatcagtgatcaaggtaccacagagtacagagtagttaacccattcgctcttaaagtctgatactctttcagttttccaacctaacttcaggtttcttgattatttgttatcagtgcccgctttttagcaagtgttcactgaccatcgacactgtgatcagacctgacaatggctgctctgagaacgtaagtactctccaatcatctagcaaccatatttgctccaatctttttcagaccaaacggcaaatactaagagagcacaatgtacataaccaggcccacaatttaaccagtgaacaattagctgcaagagaggtagaggtcgtcgacatcgcgttgcagtcgagggactactggagcaaggtgatcagcgccccaaacgtcgacctgacagccttcaggtcgcagaggacgagccgaggccctctcttgaagggttggatggtacgcaggtttcagttcagaaaacaccaatatacactcgtgttgcgtcgtcaggtctgacgtgacatttggtgcaggattcatgccgtcccgtcatgaccacgtacaagctggtgatcatggacgctccgatctggggcttgggtgaacgcctggaagactgcatcatcgcggtaaaacaaaatgctttgatctcttctgcataacacaatgttcagaaagaaattcagaggtgatgccttacttgtggtctgtgcgtgcgtgcagggggagagggcgctgttcttggcgtgccaccggctgtgcttcgcgtggatcgacgagtggtacggcatgacgttggatcagatccgagagatggagcgtcagaccgacctgcttctcaagaaggtcagcatgaacagaaagtcttcaactccatgttctgcaacaatgaattccgaatttctgatgtgtggagtcactggccaatgttgctgcagacgctgaagaagcctgcgaaggccgggagcaagcacgatggcaagaggaagacgctcaaagaggagattgtagctgtcgggagctgcacgtagtaaattggattctacgcgagatgtggttcgctacactggatggctccaagctgtcactctgtcagattaggcatgcgttgagatctggcaaaaattaagcactgtacaaaggaatccacggatgatgatgtgtatatgttggcat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0287100, RefSeq:Os03g0287100