Os03g0288900

From RiceWiki
Revision as of 19:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0288900

Description

Conserved hypothetical protein

Version

NM_001056324.1 GI:115452376 GeneID:4332494

Length

3099 bp

Definition

Oryza sativa Japonica Group Os03g0288900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10050301..10053399

Sequence Coding Region

10050398..10050425,10050522..10050639,10050743..10051385,10051703..10052492,10052571..10052608
,10052978..10052986

Expression

GEO Profiles:Os03g0288900

Genome Context

<gbrowseImage1> name=NC_008396:10050301..10053399 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10050301..10053399 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccccaccccaccccgttcgcagggaagcggcggtcggttgccgccgcgccggcgaagatagcggcgcccaagcccaagtccatcgcctccacgcgcacgaagacgacgaggaagtctcccccagcacctccaccgccacggccacggcgcgcgttcggcaccgttcgaagcagcaacgcgcatgatgcccccgagaagccgccgccgctgcagaaggctccaaaggtgtcgccgccgccgccgcagaaacctgataaggtgtcaccgccgccagctcagaagccctccaaggtgtcgccaccgccaccgccaccgcagaagtccgcgaaggtttctccgccgcctgcggcgaagcctccgaagctgtcgccgccaaatctggccaaggcgactaagccgtctcgtctggcagcaaagccccctaagaaagccgcgccgggaccggaactggatcccaagcccaggaagaaggcgcagcgggtgagcttccaggaggacgcggcgatgtcggtggcccctggaagcggagagaaggtgaaggtttccaccgatgacgcggctggtcacacgccgatggtggccgtgagagccctggagaagaaagtgagtgtcgtcgcgtccgcggagacgccgttctttagtgcgcagaactgcagcaattgcagtctcgacccgctcgaggagtccacctactggctcgcacatatccacctggccgagtcagttgggaagcacagggttgctgctgcgttctttcagcttgcattcgagtgccaagctcagccaattcacaggatccaaagtgagctaaggaattatacagtgcgccatgagagtgccagcactttaaccactttattcgatgagcttctccttgcccatggtggcatcccagtgaaccaacctaagtttgaaaccgatggttttgaggtggtggatacacctttaactacagatagtgatgacaagaggctcgatagtaccacaactcaagtggatgagagatgctcggaatgtgactgtggtggtgatatcgtcgatgtggcagttcccagtattgtgaaaccacttgaggaaggcatggaccaaccgagttttgagaggaagctgaacgacggttttgaatttgatgattgtgaagctgtcattgtggacaagctggtgggaggacattctgatctagagaagattgttgatgttaatggtcctagcgacagtgaaacaatgcagtcagcatgcagatcctccattgataggttaagcttgaaagggtctccagtagtaagcggattgtctcaaagacagctctcttcagacagtccattagataagttgtctccgtctgcacggagcttgtctgcaaagcgcttatcatctgttagcccgcttgacaaaaagtctccatttggtagcagctcgtcgaagaggctctcatccagttgcccttcttctaagaaatctttctccagtaaagccttgtcatccaagcggatgtcatctggtaatgcttctgctggagtcggtgatcttaacgaagtgattgcagatatggaatttgactgccctgcatcagatgatcagctggaactgaaagaacatggggattctgagatcaactag</cdnaseq>

Protein Sequence

<aaseq>MDPHPTPFAGKRRSVAAAPAKIAAPKPKSIASTRTKTTRKSPPA PPPPRPRRAFGTVRSSNAHDAPEKPPPLQKAPKVSPPPPQKPDKVSPPPAQKPSKVSP PPPPPQKSAKVSPPPAAKPPKLSPPNLAKATKPSRLAAKPPKKAAPGPELDPKPRKKA QRVSFQEDAAMSVAPGSGEKVKVSTDDAAGHTPMVAVRALEKKVSVVASAETPFFSAQ NCSNCSLDPLEESTYWLAHIHLAESVGKHRVAAAFFQLAFECQAQPIHRIQSELRNYT VRHESASTLTTLFDELLLAHGGIPVNQPKFETDGFEVVDTPLTTDSDDKRLDSTTTQV DERCSECDCGGDIVDVAVPSIVKPLEEGMDQPSFERKLNDGFEFDDCEAVIVDKLVGG HSDLEKIVDVNGPSDSETMQSACRSSIDRLSLKGSPVVSGLSQRQLSSDSPLDKLSPS ARSLSAKRLSSVSPLDKKSPFGSSSSKRLSSSCPSSKKSFSSKALSSKRMSSGNASAG VGDLNEVIADMEFDCPASDDQLELKEHGDSEIN</aaseq>

Gene Sequence

<dnaseqindica>98..125#222..339#443..1085#1403..2192#2271..2308#2678..2686#attcgtctccctcccccaatttcctcccattccaatcgaacgcctcgtctcctcacctcctcgtcttcctcgatctctcgtcgtcgtcgtcgtcgccatggatccccaccccaccccgttcgcaggtaagcaagcgtcaacttccgcaccaagacccccccaatggttacctctctctctctctctgttgacgagatcgatccattccgcgggttgcgcagggaagcggcggtcggttgccgccgcgccggcgaagatagcggcgcccaagcccaagtccatcgcctccacgcgcacgaagacgacgaggaagtctcccccagcacctccaccgccacggtaaggagatcgccggcaatccatattgaaaaatcctctgtaagatgtgtagcgcgactatggtttcgcactttcgcttactgaggtagaattttttttccaggccacggcgcgcgttcggcaccgttcgaagcagcaacgcgcatgatgcccccgagaagccgccgccgctgcagaaggctccaaaggtgtcgccgccgccgccgcagaaacctgataaggtgtcaccgccgccagctcagaagccctccaaggtgtcgccaccgccaccgccaccgcagaagtccgcgaaggtttctccgccgcctgcggcgaagcctccgaagctgtcgccgccaaatctggccaaggcgactaagccgtctcgtctggcagcaaagccccctaagaaagccgcgccgggaccggaactggatcccaagcccaggaagaaggcgcagcgggtgagcttccaggaggacgcggcgatgtcggtggcccctggaagcggagagaaggtgaaggtttccaccgatgacgcggctggtcacacgccgatggtggccgtgagagccctggagaagaaagtgagtgtcgtcgcgtccgcggagacgccgttctttagtgcgcagaactgcagcaattgcagtctcgacccgctcgaggagtccacctactggctcgcacatatccacctggccgagtcagttgggaagcacagggttgctgctgcgttctttcagcttgcattcgagtgccaagctcaggtgagagttaaatgaacatggtttttagttgataagtcaatctaaaatttaaactgtaagtatacgtgcattttatgttctggttattgtagatgtattagacattgtttctttttcttggaagaaattatgtttgtgggttttacctgaataaccaattgataggaacataaacactcgttgactgttcaagacttcaggcacaacctattgataggaaacatttcatttttatattatttttttactttacttattagcaataatctacatagttattgatttcacctaaagaaaaagtttacttttgtggacagccaattcacaggatccaaagtgagctaaggaattatacagtgcgccatgagagtgccagcactttaaccactttattcgatgagcttctccttgcccatggtggcatcccagtgaaccaacctaagtttgaaaccgatggttttgaggtggtggatacacctttaactacagatagtgatgacaagaggctcgatagtaccacaactcaagtggatgagagatgctcggaatgtgactgtggtggtgatatcgtcgatgtggcagttcccagtattgtgaaaccacttgaggaaggcatggaccaaccgagttttgagaggaagctgaacgacggttttgaatttgatgattgtgaagctgtcattgtggacaagctggtgggaggacattctgatctagagaagattgttgatgttaatggtcctagcgacagtgaaacaatgcagtcagcatgcagatcctccattgataggttaagcttgaaagggtctccagtagtaagcggattgtctcaaagacagctctcttcagacagtccattagataagttgtctccgtctgcacggagcttgtctgcaaagcgcttatcatctgttagcccgcttgacaaaaagtctccatttggtagcagctcgtcgaagaggctctcatccagttgcccttcttctaagaaatctttctccagtaaagccttgtcatccaagcggatgtcatctggtaatgcttctgctggagtcggtgatcttaacgaagtgattgcagatatggaatttgactgccctgcatcaggtaactcaacatgtccaaagcttttactttgacattgtccctaagattacttattttctgattgagagcaccttgcagatgatcagctggaactgaaagaacatggggattctgaggtgtgtttaagggttttatttacactctggagttctgcagaaatgatatgatggatttaaatatagcttaattttaacagtagtgtgctcatgttcctagtaaaataaaattgtcgccttgtcgaagtaagaaactcattacactagtaaggcacacacatgtatttgttagtttgcacaatagtactagtattatctaccgagcttccaaaactctttgatgcatctgttgctattacagccctgtacgcttgaaataatgtagtcccaaaccattttcctgaccactctaacaaagtagattacatatgtgatgaaagatctatgttacaagaacagttacttaaagatcttacacgttctttgcagatcaactagcttctggagagggacttactacagcggtacaactgcaatgggtgctaatataaatttagatgtaagatttgctcgtctgcgtatgttcggtagtttgaatttctgacttgatcacattgctagtttgcctttggtgtggactcgagcagacatgtgtttgctcacgcgtggtgttttattctcaccagtccaagaacatggttttcagcaaagatcatcgtgctcggatgatctttgtgttcttgacagttgacaggttctgtgtgcttgcttagcatgacaaatgagggttatggtattcttgtttgatttggcaataacttgtaccttcggtatttgaggtcaatgtaatatggatttctttatgattgccagtgaacactgtgaactgttgatgcccgtgcaaattttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0288900, RefSeq:Os03g0288900