Os03g0291800

From RiceWiki
Revision as of 19:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0291800

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001056335.1 GI:115452398 GeneID:4332508

Length

4538 bp

Definition

Oryza sativa Japonica Group Os03g0291800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10199213..10203750

Sequence Coding Region

10199299..10200116,10200809..10200989,10201083..10201282,10201391..10201549,10202932..10203298

Expression

GEO Profiles:Os03g0291800

Genome Context

<gbrowseImage1> name=NC_008396:10199213..10203750 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10199213..10203750 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttttctttaaagcggcggagcgggaggccttcctgggcgctccggagatgcagcagcggcggaagtcggtgttcgcctcggcgccgttcgcgatgaagcaggcggcgctgggggccggcgtggcggcgcgcaggaacggcgcgccgctgtcgctggcggcggtggtgttcgcgctcttcgtgttcgcgacgttcctctacaacgaggacatcaagtccatcgccgacttccccttcggcgccggcgcgctccgcgccaagtcccccgacctccacgtcctccaggagaccgtgggcgccgcgcacctcgccgccggcagcatcgccaagcgcggcgaggaggtcatcgtccgtgtcctcgacgcgcccgcctccacggcgatggcggccgccgccggcagcagcagcaacaacagcacgattgaggtggccaaggccaatgccaacgccaacgccaacgccgccgacgccggtgtcaaggtggacgaggggcaggagagggagcgggacgtgacgctcccgagtgtcaaggaaggcggcgccgacgaggcgaggcggcgggaggacgaggaggccgccgagaaggagtcctcggcgaaggccgccgcggcgacggcggcgctgcggaccgtggtgagcgtgccggacacctgcgacctgtaccgcggcaactgggtgtacgacgaggtgaacgcgccggtgtacaaggagtcgcagtgcgagttcctgacggagcaggtcacctgcatgcgcaacggccgccgcgacgactcctaccagaagtggcgctggcagccgaccgactgcgacctgccccggttcgacgcgaggctgctgctggagcggctgcgcaacaagcggctgatgttcgtgggggattcgctgaaccgcaaccagtgggagtcgatggtgtgcctggtccagtccgtgatccccaagggcaagaagacgctcaccaagttcgtcaacggcggcaacagcaacatcttctacgcacacgagtacaacgcgacggtggagttctactgggcgccgttcctggtggagtcgaactcggacaacccgcaggtgcacagcgtccccgaccgcgtcatccagtggcactccatcgccaagcacgcgcacaactggctcggcgtcgactacctcatcttcaacacctacatctggtggctcaacaccctcgacatgaaagtcctgaaggggtcgttcgaccagggtgcgacggagtacgtggaggtggaccggcccgtggcgtacaaggaggtgctcaagacgtgggcgaagtgggtcgaccgcaacattgaccccaaccggacgaccgtcttcttcatgagcatgtctcccaaccacatcacgccggaggcgtggggaaactacggagggatcaagtgcgcgatggagacgctgccgatcacgaaccggacgacgtcgctggacgtgggcacggactggaggctgtacgccggggcgcaggaggtgctccagacgttccgccgggtgccggtgcacctcgtcgacatcacggcgctgtcggagctccgcaaggatgcgcacacgtcggtgcacacgctccggcaggggaagctgctcacccccgagcagcagtccgaccccaagacgtacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctctacgcccgcatcgcctccgccccatggtcatccgaccagtag</cdnaseq>

Protein Sequence

<aaseq>VFFKAAEREAFLGAPEMQQRRKSVFASAPFAMKQAALGAGVAAR RNGAPLSLAAVVFALFVFATFLYNEDIKSIADFPFGAGALRAKSPDLHVLQETVGAAH LAAGSIAKRGEEVIVRVLDAPASTAMAAAAGSSSNNSTIEVAKANANANANAADAGVK VDEGQERERDVTLPSVKEGGADEARRREDEEAAEKESSAKAAAATAALRTVVSVPDTC DLYRGNWVYDEVNAPVYKESQCEFLTEQVTCMRNGRRDDSYQKWRWQPTDCDLPRFDA RLLLERLRNKRLMFVGDSLNRNQWESMVCLVQSVIPKGKKTLTKFVNGGNSNIFYAHE YNATVEFYWAPFLVESNSDNPQVHSVPDRVIQWHSIAKHAHNWLGVDYLIFNTYIWWL NTLDMKVLKGSFDQGATEYVEVDRPVAYKEVLKTWAKWVDRNIDPNRTTVFFMSMSPN HITPEAWGNYGGIKCAMETLPITNRTTSLDVGTDWRLYAGAQEVLQTFRRVPVHLVDI TALSELRKDAHTSVHTLRQGKLLTPEQQSDPKTYADCIHWCLPGLPDTWNQFLYARIA SAPWSSDQ</aaseq>

Gene Sequence

<dnaseqindica>87..904#1597..1777#1871..2070#2179..2337#3720..4086#gggaagcaaagcaagaagctttttttacttctcgggtttgcaagccaccgggaaaggccggggcttggtggtggtggtggtggtaagttttctttaaagcggcggagcgggaggccttcctgggcgctccggagatgcagcagcggcggaagtcggtgttcgcctcggcgccgttcgcgatgaagcaggcggcgctgggggccggcgtggcggcgcgcaggaacggcgcgccgctgtcgctggcggcggtggtgttcgcgctcttcgtgttcgcgacgttcctctacaacgaggacatcaagtccatcgccgacttccccttcggcgccggcgcgctccgcgccaagtcccccgacctccacgtcctccaggagaccgtgggcgccgcgcacctcgccgccggcagcatcgccaagcgcggcgaggaggtcatcgtccgtgtcctcgacgcgcccgcctccacggcgatggcggccgccgccggcagcagcagcaacaacagcacgattgaggtggccaaggccaatgccaacgccaacgccaacgccgccgacgccggtgtcaaggtggacgaggggcaggagagggagcgggacgtgacgctcccgagtgtcaaggaaggcggcgccgacgaggcgaggcggcgggaggacgaggaggccgccgagaaggagtcctcggcgaaggccgccgcggcgacggcggcgctgcggaccgtggtgagcgtgccggacacctgcgacctgtaccgcggcaactgggtgtacgacgaggtgaacgcgccggtgtacaaggagtcgcagtgcgagttcctgacggagcaggtcacctgcatgcgcaacggccgccgcgacgactcctaccagaagtggcgctggcagccgaccgactgcgacctgccccggtacgccatttcttcccccacaattttttcacgccatttcttgcccaatttcgtgccgtttcacgcaattccgggtaaccggcattgactcacgccggcgatcatcgtcggtttcccaaattgatgccggtttctacccttttctttttcttttttcatcagcatcggtcggtcacctcgaaacgctaagtcagaaataaccgtaggaatacttacgggccaaaattaagacgaacgtgtcagggaaattaaaatagaacgttcgagatttttgaaacggaacagagagtagtagtaccaccatgccacaccagtacaccactctggtagtgagctgtgacgtcggactgtactgtgcagccgcgctaccccctgttggattaagctttgcttaatctaatcactcagcatctggctgctgttgaagcagccactacttaaatcaaacacaggcacgccaaattattctcttttccaaccggggaacagctgcacgcagcgacgcccagtcagtcacacagtgggtgagtgacgcgagtagaatatactactacaacttgctctgtatctgtgtctcggcacagtctgatgatagtggcaaatatagttggcgatccaacaacgctggttgctaaataacgcaggaaaagtctaacgaaagctgatgtggtgtggggaaaaaaaaactgcaggttcgacgcgaggctgctgctggagcggctgcgcaacaagcggctgatgttcgtgggggattcgctgaaccgcaaccagtgggagtcgatggtgtgcctggtccagtccgtgatccccaagggcaagaagacgctcaccaagttcgtcaacggcggcaacagcaacatcttctacgcacacgtacgtagcaggcatcagcaacgtcacgtacgtactccgctgtcgatccgacatgatctccccctgacgatacggtgtatgtgctacgtgcaggagtacaacgcgacggtggagttctactgggcgccgttcctggtggagtcgaactcggacaacccgcaggtgcacagcgtccccgaccgcgtcatccagtggcactccatcgccaagcacgcgcacaactggctcggcgtcgactacctcatcttcaacacctacatctggtggctcaacaccctcgacatgaaagtcctgtaagttgtactcctagcaccccagcagcgtacacacatacatatagtgatatagaagtgggtgtgctgatctgggcgaaaaaatatgtgtgtggttgtacgtgacaggaaggggtcgttcgaccagggtgcgacggagtacgtggaggtggaccggcccgtggcgtacaaggaggtgctcaagacgtgggcgaagtgggtcgaccgcaacattgaccccaaccggacgaccgtcttcttcatgagcatgtctcccaaccacatcacgtaagccgccatttatgcctttgcctgcatctgcattgcattgcccctctccatgatttacttcgctgcacagtgcacacgtgcccacgcgcagtacagttcgctcggagttaatctaccaatcaataggaagatatgctgcacagtgatggtacatagagaactccattccgattaggtgttggggtatgttcagaaaacaaaattaggtgcttgaggtgtacctagcaactgtgttgcgtttgcaaggaggaaacttagctagcagccacacttgctttctggactaatagtaatctacaagtaatttaattaggtggtgagagcctgaggggactcgtgagctttcggagaaacattagtagtagaagcctcttatacattaactagctactagtagcatggtatcggaatacaactgcacatggtatcccatcatagagcactgtactactcatcggtagctgtctctcgtgaaatggcatcgtggggcacggtacctgcgtacaacgcgtcactgtacttcgtcaggacatggtccggacaatctgttctgactggttcaagatttgcatttttcacggtttcaacactggtatctaagcttctttagccaatactataaaaagcttaattaattagtgagatgtcttcaaaacatgctagttgacgtgggtgtagaaacaactgaggtttgttgaaccaagaataattcaaattgagtatgtatttgtgtagagtagtaagctcaaaactagtcatgtggatagctggagagaggcgagctacggtgacaagctgatgttggtggaccatagaaaatcccaggcccacctgtaggcatgcatctcgacatggcccaccctagtcgctaccaaagatgaagcatacgaatccaattccccgagctccatgtcactttccttcctcgagccctaaccccacgaaagagaaacgacatcaagttgaaggtagcaacaaaagacagtagtataatactgatagcaatcaagcctactaatcgtgctccacaatgatgatcagcctttgccattgcatctttgctgttgcaaaatactcaaaacagagagattcttgcagtagtcgacaagcaaaagttaaatcagttttggtccctgcaagaatctcgagctagtatccgcataaattacacggtccgtgcatatgctgtgataatggcgccaatatgcgagtgccatcatcatcagggtatcatcagcacgacagaatctagggtaccacggctccaattcgctggaacattaaccatagtactgcatcagaattctacccatcacggcatcacgtggtgacggacggatggtggtataatcttgtgtcgtgtgcgcgttttgtggcaggccggaggcgtggggaaactacggagggatcaagtgcgcgatggagacgctgccgatcacgaaccggacgacgtcgctggacgtgggcacggactggaggctgtacgccggggcgcaggaggtgctccagacgttccgccgggtgccggtgcacctcgtcgacatcacggcgctgtcggagctccgcaaggatgcgcacacgtcggtgcacacgctccggcaggggaagctgctcacccccgagcagcagtccgaccccaagacgtacgccgactgcatccactggtgcctcccgggcctccccgacacctggaaccagttcctctacgcccgcatcgcctccgccccatggtcatccgaccagtagaaaaagagccaaataaggctagcttccaagtgttctgcgagacaagaaaaggagccaagaacaccgttgacacaccatcgatgcccgccgcccggccgcggccacctcactttttcttactttgggttacttttttttcttctctttttttcaccatttttctttctttctctggggttgcgtaaagctgtcttgtgctgtgtttaacatgtgattcttttgttaaaaaagaaatggagggtttaggatggtgaaggaggatctgtgggcgggctgtgttgactatagctcatttcttgtcctgctgataaaggatgcatggataggagaaagcaaaaaaagggtgtgatgtgagatgtaaggggggaaagaaaaagggagggttacatgtaaagaatttttgtgtattacaccattctagtacattgatgctcaagagaggtataaaggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0291800, RefSeq:Os03g0291800