Os03g0294700

From RiceWiki
Revision as of 19:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0294700

Description

Similar to Ethylene-overproduction protein 1

Version

NM_001056354.1 GI:115452436 GeneID:4332527

Length

3630 bp

Definition

Oryza sativa Japonica Group Os03g0294700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10338564..10342193

Sequence Coding Region

10338564..10339517,10340008..10340301,10340379..10340688,10341438..10341667

Expression

GEO Profiles:Os03g0294700

Genome Context

<gbrowseImage1> name=NC_008396:10338564..10342193 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10338564..10342193 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaagccgcccacctcctcgtcgccgcctgcctccaggccttcctccgggagctccccaagtcgctctccaaccccgacgtcgcgcgcctgctctgcagcccagatggcagggagcgcctcgacatcgccgggaacgcgtcgttcgcgctctactacttcctctcgtccgttgccatggaggaggacatcaggtcgaacaccacggtgatgctgctggagaggctatgtgaatctgcggagcgaccatggcagaagcagctggcattgcaccaattcgggtgtgtgatgctggagcggggtgaattcaaggacgcgcaggggtggttcgaggatgccattgccgagggccacacgtactcgctcgccggcgtggcgcgctccaagttcaagcgtggccacaagtactcggcatacaagatgatgaacagcatcatggaggactacgagccggccgggtggatgtaccaagaacgttcactgtactgtgttgggaaggagaagatggctgatctccatatagcaacagagctcgacccaaccctgacattcccatacaagtaccgtgccgttgtgttcttagaggaggacatggttgagtctgctgtcgcagagatcagcaaggtccttggattcaagctggtgactgactgccttgagctccgggcatggttctaccttgcacttgaggagtatgaggctgcagtgcgggatatcagggcgatattgacgttggatcctagttacatgatgtttcatggaaaagtgcatggagaacagctgatcgagatcctccgagggtatgtgcagcaatgggatatggcggattgctggatgcagctctatgaccggtggtcagaggtggatgacatcggctctctggctgtcgttcagcagatgctcaccagggaacctgggaacagtagcttgcggttccgacaatcactgctcctattaagactaaattgtcaaaaggctgcgatgcgtagtttgagatttgcacgaaattgttcggctcatgagcatgagagacttgtatacgaaggatggattttgtacgatactggacaccgtgatgaagcacttgccaaggctgaacaatcgattaaaatccaaagatcatttgaagccttttttctgaaggcatatgctctaggggattccagccttgacacagaatcttcactctctgttgttcaacttctagaacatgctaatagttgtgcatctgacaatcttcgcaagggacaagcatataacaatatggggagcatatatgtggattgtgatttgctagatgaggcagctgaatgttacaacatagcattgaatataaagcatacacgggcgcatcagggtctggcacgggtccattacctgaaaaataggaaaaaggctgcgtatggagagatgtctgaactaataaaggtagctaaagacagtgcatcggcatatgaaaaacggtcggaatatggtgaaagagatgaagcaagaagtgatctcaatatggcaacacttttggatcctacaaggacttacccttacagatacagagcagctgttctgatggacgaaagcaaggaagacgaggcgatcggagagctctcacaagcaatagctttcagggcagacctccagctgctccatctccgggcagcattcttcgactccatgggcgacaacgccaacaccctgcgggactgcgaggctgccctttgcctggacccgacacacggtgacaccctggagctgtacagaaaagcttctacaaaagccgaaccacaaagctag</cdnaseq>

Protein Sequence

<aaseq>EAAHLLVAACLQAFLRELPKSLSNPDVARLLCSPDGRERLDIAG NASFALYYFLSSVAMEEDIRSNTTVMLLERLCESAERPWQKQLALHQFGCVMLERGEF KDAQGWFEDAIAEGHTYSLAGVARSKFKRGHKYSAYKMMNSIMEDYEPAGWMYQERSL YCVGKEKMADLHIATELDPTLTFPYKYRAVVFLEEDMVESAVAEISKVLGFKLVTDCL ELRAWFYLALEEYEAAVRDIRAILTLDPSYMMFHGKVHGEQLIEILRGYVQQWDMADC WMQLYDRWSEVDDIGSLAVVQQMLTREPGNSSLRFRQSLLLLRLNCQKAAMRSLRFAR NCSAHEHERLVYEGWILYDTGHRDEALAKAEQSIKIQRSFEAFFLKAYALGDSSLDTE SSLSVVQLLEHANSCASDNLRKGQAYNNMGSIYVDCDLLDEAAECYNIALNIKHTRAH QGLARVHYLKNRKKAAYGEMSELIKVAKDSASAYEKRSEYGERDEARSDLNMATLLDP TRTYPYRYRAAVLMDESKEDEAIGELSQAIAFRADLQLLHLRAAFFDSMGDNANTLRD CEAALCLDPTHGDTLELYRKASTKAEPQS</aaseq>

Gene Sequence

<dnaseqindica>1..954#1445..1738#1816..2125#2875..3104#gaagccgcccacctcctcgtcgccgcctgcctccaggccttcctccgggagctccccaagtcgctctccaaccccgacgtcgcgcgcctgctctgcagcccagatggcagggagcgcctcgacatcgccgggaacgcgtcgttcgcgctctactacttcctctcgtccgttgccatggaggaggacatcaggtcgaacaccacggtgatgctgctggagaggctatgtgaatctgcggagcgaccatggcagaagcagctggcattgcaccaattcgggtgtgtgatgctggagcggggtgaattcaaggacgcgcaggggtggttcgaggatgccattgccgagggccacacgtactcgctcgccggcgtggcgcgctccaagttcaagcgtggccacaagtactcggcatacaagatgatgaacagcatcatggaggactacgagccggccgggtggatgtaccaagaacgttcactgtactgtgttgggaaggagaagatggctgatctccatatagcaacagagctcgacccaaccctgacattcccatacaagtaccgtgccgttgtgttcttagaggaggacatggttgagtctgctgtcgcagagatcagcaaggtccttggattcaagctggtgactgactgccttgagctccgggcatggttctaccttgcacttgaggagtatgaggctgcagtgcgggatatcagggcgatattgacgttggatcctagttacatgatgtttcatggaaaagtgcatggagaacagctgatcgagatcctccgagggtatgtgcagcaatgggatatggcggattgctggatgcagctctatgaccggtggtcagaggtggatgacatcggctctctggctgtcgttcagcagatgctcaccagggaacctgggaacagtagcttgcggttccgacaatcactgctcctattaaggcatgtaccttttctctcttttcatttgacaatggatcccattttctaaaaaaattgtcgagactaatcccaccaactgaatcgtaagtttgatattttcattagctataaaaaaaagtagaattgattgaacagctctttgtgtgcttccttttgtctgataattttgtgggtcaatttaactagctgatcattgcctatgctttcttttacatataggagtgcaagctttattaaaattggaaccaaatttacaaaaatgaaaataatttgtaagattgttggtgtgaaggctcatggacattagtaagttatgctctaagctatgtttccgtgcgtgtacagatttttttttgtgataacataaaaaaaaagtgggggatcgaagattattatttgataacaaaaggagagaaccaaaatgatactactaatttgtagtttgttttgttcatgggcttaatatttttttctttctcgttcattgtagactaaattgtcaaaaggctgcgatgcgtagtttgagatttgcacgaaattgttcggctcatgagcatgagagacttgtatacgaaggatggattttgtacgatactggacaccgtgatgaagcacttgccaaggctgaacaatcgattaaaatccaaagatcatttgaagccttttttctgaaggcatatgctctaggggattccagccttgacacagaatcttcactctctgttgttcaacttctagaacatgctaatagttgtgcatctgacaatcttcgcaagggacaagtaagaactattcattgtctctcatttgcatgatgatatcgattgattatttgctctaacaaccatacatttttcaggcatataacaatatggggagcatatatgtggattgtgatttgctagatgaggcagctgaatgttacaacatagcattgaatataaagcatacacgggcgcatcagggtctggcacgggtccattacctgaaaaataggaaaaaggctgcgtatggagagatgtctgaactaataaaggtagctaaagacagtgcatcggcatatgaaaaacggtcggaatatggtgaaagagatgaagcaagaagtgatctcaatatggcaacacttttggatcctacaaggacttacccttacagatacagagcagctggtaagtgcgcttaaacatattttgtggacttctttcattgttttgatgtctatgctatggttgcagtcgctttgacttagtaacaccaaatctcatggatttgtagaaggcttgcattctgtttagatttgcatgataagattactacccattgatttgtgtcagaagatttgcggagacatagctggtcattatatttcagtggctcataacggttttcgtttggatcttgtagtacttctcatttacagtctagtattctctatgaccacagctctacattgatgttatatcttccaatcccactacacagtttttccgagttgcattttgacgaatataaatgatctttaatactcctagcatttatactacctccgttttaggttataagactttctagtattgctcatattcatatagatgttaatgaatctaggcacacatatatgtctagattcattaatatatatatgaatgtggacaatgctagaaagtcctataatatgaaacggaggaagtaccatttaaaatgtaagtaagatattagctggtacagaagttacagtttatacttaccaaaagaatttcatgccctgttacaggaacggctagtgatgtagtgcatgccattgctaccttcttcagtttgcatttttgatttaagaatgcgcaagttgacaactagtattatagcactgtggagcacaatactatactaccgttttcctttttgcgtgttttctcagttctgatggacgaaagcaaggaagacgaggcgatcggagagctctcacaagcaatagctttcagggcagacctccagctgctccatctccgggcagcattcttcgactccatgggcgacaacgccaacaccctgcgggactgcgaggctgccctttgcctggacccgacacacggtgacaccctggagctgtacagaaaagcttctacaaaagccgaaccacaaagctagtaaaataacctgtgcactcgccatgccacctcatcgtcgccatcttcgtcgtcgtcgattcagctgcagattttttttttctaggcaggatgatgaaacgattgttccttcgagagagctgtgaaagtaacagattaacagaagcccctgcggatcagtgaggcaggatcacgagaaggtacacagtacataacacatgattacgagtgtaagtattacagtgcttactcctactagcttggaggcaccgggaagacagagagatccacaggagatgaacatgttgtaaattatgatagcgttgtgtaaatggcaaaagaaaaaagaagatttgttatgtacatcaaagataacaaatcgctccagaagagagagctaaagaggaagcaacggtgtcctttaattagaccgggcacatacttttcccccttttcttctccccttctttaatgccttttgatctgtatttggaggcacgttttctcgttgcttaagcttttccatgatgcattcatgcaggcaaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0294700, RefSeq:Os03g0294700