Os05g0125700

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0125700| Description = Conserved hypothetical protein| Version = NM_001187264.1 GI:297723658 GeneID:9272486| Length = 4620 bp| Definition ...")
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Gene Name

Os05g0125700

Description

Conserved hypothetical protein

Version

NM_001187264.1 GI:297723658 GeneID:9272486

Length

4620 bp

Definition

Oryza sativa Japonica Group Os05g0125700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1456115..1460734

Sequence Coding Region

1456115..1456342,1457364..1457417,1457710..1457995,1460211..1460734

Expression

GEO Profiles:Os05g0125700

Genome Context

<gbrowseImage1> name=NC_008398:1456115..1460734 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1456115..1460734 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggagctcgacggtggcgcatggcgtcggcgaggtggcggcatcgacgacggttgaagaggtgggcatctgggccgatgacaatgaggcggcggtgctggctcctgcactctcctgcggggaactggagggggggatcccgagccgccgccggcggcgatgcgcgtggatccggcggtggaggcggcggggtggctggttccggccccctcctgtccggatccggcgcgggaggccgagctccgaccccaggcggcgaggcggcggggtgcggaggccgtggcgcagccgtgaggaggcgggggcggccatacggagccaatggcgtcacacggccgtgaggaggcggtggcgcgaccgtgcggagacggcagcggtggcgaggttgcggggaggcaacgaggagggagaactgtggctgtggaggcgaccgtcacgactgctgtcaaagtggaggcggggaaggagttgggcgccggagaaggaccgcggcgtgagcccggcgacggcggtggtctgccgcaccaagaagacaaaatcatccgtggatttcggcttccctagctatccaacaaatctcatcgaccatggccagactttcttttcctccagccgggagcttagagaacgagccatcggaagagtctgtcatggattaattttgatcacctgcactcacgggattcatttgcacaagctcagggtctttttgtcatctatggctgcaaagcctgaggctcagatgggaagtgatgttagttgttcaacaaaaaatattgtgcctgcttcatctgttgcccaactcatggaatcggttatggcagtttgtagaatatttggttaccgcaacaatttattgaagatggagaaagggaaggtaccaaaagcgcattgggatgcatatgcttccaaagtgttctgtgagatatgtagggatgaggttctagcaggaaatagaccaacagctgccttgagtccccttggctacaaaaacttggaagaaaaattctttgcacagaccgggcggcaatatgaccgtacaaaattaaagaatcgttgggacactttgaagacacaacacaagatgtga</cdnaseq>

Protein Sequence

<aaseq>MWSSTVAHGVGEVAASTTVEEVGIWADDNEAAVLAPALSCGELE GGIPSRRRRRCAWIRRWRRRGGWFRPPPVRIRRGRPSSDPRRRGGGVRRPWRSREEAG AAIRSQWRHTAVRRRWRDRAETAAVARLRGGNEEGELWLWRRPSRLLSKWRRGRSWAP EKDRGVSPATAVVCRTKKTKSSVDFGFPSYPTNLIDHGQTFFSSSRELRERAIGRVCH GLILITCTHGIHLHKLRVFLSSMAAKPEAQMGSDVSCSTKNIVPASSVAQLMESVMAV CRIFGYRNNLLKMEKGKVPKAHWDAYASKVFCEICRDEVLAGNRPTAALSPLGYKNLE EKFFAQTGRQYDRTKLKNRWDTLKTQHKM</aaseq>

Gene Sequence

<dnaseqindica>4393..4620#3318..3371#2740..3025#1..524#atgtggagctcgacggtggcgcatggcgtcggcgaggtggcggcatcgacgacggttgaagaggtgggcatctgggccgatgacaatgaggcggcggtgctggctcctgcactctcctgcggggaactggagggggggatcccgagccgccgccggcggcgatgcgcgtggatccggcggtggaggcggcggggtggctggttccggccccctcctgtccggatccggcgcgggaggccgagctccgaccccaggcggcgaggcggcggggtgcggaggccgtggcgcagccgtgaggaggcgggggcggccatacggagccaatggcgtcacacggccgtgaggaggcggtggcgcgaccgtgcggagacggcagcggtggcgaggttgcggggaggcaacgaggagggagaactgtggctgtggaggcgaccgtcacgactgctgtcaaagtggaggcggggaaggagttgggcgccggagaaggaccgcggcgtgagcccggcgacggcggtggtctgccggtgagatgcacggcgcggtggtttcacggccacgggcggctagccggggaggcgtggcagatggccgcatttggttggcgtggccagcggtagtggatgtcggcacggtgcgaggtggcgtggccggcggcaagatcggcttggcgtgaggaggcgcggccggcggccagtagcgtcttcacgtctgtaacagttgctggtgacacgcttgcgccacccacggccgggagcatccttgtcttcgctatcaaccatcggcgtgtaccttcatggctacaactgatgataagcttggactagtcgccgtcgccggtgccaattatttgtgcatccaccgccaacgtgctcaagtttggagccaccgatcacaattaagttcacttctaaaattagtggtgatctaaacgaaaatttgataataattatattttgttagtctttgatttaatggcgatcgtatcttatattttgggttgggttggaggaagatataagaaaattagtgtgcggtgtagtatttgaaaaggagaatatacatgaaaggaagacacattggcaccggtggaggaacagagagtatgtaacactgctggtagaagtgtagccgcgagattttatcgatggcctacttgcgcgtcctctcgtgctcatgtgaagcgccgcatggcacgaacgtagggaacagatccacactaaaattttacctctcccatatggaacatttaaacacatgtataaaggattaaatatatatacttaaaaaataactaattacacatattgcaactattttacgagacgaaacttttaagcctaattactacatgatttgataatatgatgtatagtaaacatgtgcgaatgatagattaattatacttaataaaatcgtgtcggggtttactgacgaatactgtaattagttttttattacagtgaggggagcgttttagttatagcccacgtgcggtttagcgtatcctaaatgtatcaaagtgcgggatatcatatttatctgcaatctcatacagagtatactaaatgtatttctctcttaacatagtttgataaaccagttttatttgttattaataactaatataagttttacttttagcgtgtttattaaaagaatattaaaatttacttagaaatttccacagcaaagcgggaagaatcaactagttttaatagtttgatgtaccggcgacaaacagaactacacttctaacacagattcgtcacgtcccttgtcaaacactagtattcacaagtaataaacgcaacactgaacctgctaaccacagctttcacgcgagaagatgccctccagacaacgcataagtaagataaaaaagatacaacaggtatagagttgtctcctacaatcagttgtccctattcccttctttatataaagttaacacccactaactgcaattaagatcttaaaactcaatcctcaatgatccacgtcatcaacatttctcagccgttggatcaattaatggattagataactttacagccgttggatgagaaaaacgcagcacgctcagatgaaaacagcccaaccatgttctctcaaacagccaaaccgtgaggcccatctagctaatccgatccagcacagcccaaccatcatctctcacacagccacccccgtgaggcccatttggctaattcgatcatggccaattcaagagtaaaggatttagggtttttgttggatcggtgtggccgtgtagggtctcgtcctgagtcggagtggtggcgccggctggttcatccctaacagactaaaccatccacgccacaatgccgttgcgcaaccgtttctcctcctcacgcgaacgctgcgcttgcttgccccctcctcttcggccctttggttcccccttgagagcgtagttattaccgagctgcgtattcctccgttcctaaatgtttgacgctgttgatttttttaaatatatttgaccgttcgtcttattcaaaaacttttgtgaaatatgtaaaattatatgtatacataaaagtatatttaacaatgaatcaaatcataggaaaagaattaataattactcaattttttttaataagacgaacggccaaacatgttcaaaaaaagtcaacgacgtcaaatatttagagacggatggaatattaaaatagggaagttgagtagtcggtgagatatgtaactgatgtgcagcaccaagaagacaaaatcatccgtggatttcggcttccctagctatccaacaaatctcatcgaccatggccagactttcttttcctccagccgggagcttagagaacgagccatcggaagagtctgtcatggattaattttgatcacctgcactcacgggattcatttgcacaagctcagggtctttttgtcatctatggctgcaaagcctgaggctcagatgggaagtgatgttagttgttcaacaaaaaatattgtgcctgcttcatctgttgcccaactcatggtctatagctcgtaatgctgcgctatgtaatatgaccgctctacgtttctcatgctgatctatattacttttattttatccatagggaaatcacttttatagcctccaaagctgtaagcaagaagaaatcattcatattgagattgaatagtattagcaaaaggaagctattttaatcagttgaggattggacataatttatttctctcttcattccatcaatggttatttggagaactacttcgatactgcaacaattttctttctatatatcaatatatgtgctatacaggaatcggttatggcagtttgtagaatatttggttaccgcaacaatttattgaaggtatgatcatgcgtctcaaactcctcttccttaattatacaaattcaactattcttagaaaataaaatatatatcaagagaatatttggttttcgatctctcctacaagaggttcatagtcctcaatgtcggcccattcaaaaggtcttagagagcatgactctttcgttcgattggtcagtcttaaaacaaagaaattagttttgtatgaaagcaatcaaattcctttgttaatcaatttcaatattttactaatatgtttaccacactaagtttataaattttaatattatttacaagatttcccgctgcaacgtgcggggcctcatctagtattattaaactgtacataatagccacttccctacactggtaagaggcaaccccaaaaggcattccttctccccgccgagctacaccaccctattctcagctgctgcacacagtgagttcttccttctcctttcgtccagtttttttagggttcttgtatttttttggctcagatctggcgatttgtaatgtgatagttcttgatctgtgatgtggaagtccagagcttggattagctattcacatatttcatttatattgaacttgttcagattatatagggttcttgcatgtatgttcgtttagcaaatattgctatagtttaagtactaaacatatacaatttatttggtagggttcttgtactgaacatatacaatccaattttttctagggttattgtgtagttggctcagatctggtgatttgttatgtgattgttcttgatctgtgatgtggtagttcctgagcttggattagctactcacaaatttggtagttgtatggtttatttataacttgttcagatagggtactgccgtactggcatgtatgttcgtttagcacatatttctctagtttaagtactaaccatatgcattccaataaattggtagcaaatttattaaaatggcacacgcgtatactcggaattgttaattttttttgatgaatatgtggtacatagatggagaaagggaaggtaccaaaagcgcattgggatgcatatgcttccaaagtgttctgtgagatatgtagggatgaggttctagcaggaaatagaccaacagctgccttgagtccccttggctacaaaaacttggaagaaaaattctttgcacagaccgggcggcaatatgaccgtacaaaattaaagaatcgttgggacactttgaagacacaacacaagatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0125700, RefSeq:Os05g0125700