Os09g0527900

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0527900| Description = Similar to Hd1-like protein| Version = NM_001070268.1 GI:115480278 GeneID:4347644| Length = 3567 bp| Definition = O...")
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Gene Name

Os09g0527900

Description

Similar to Hd1-like protein

Version

NM_001070268.1 GI:115480278 GeneID:4347644

Length

3567 bp

Definition

Oryza sativa Japonica Group Os09g0527900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21478060..21481626

Sequence Coding Region

21478416..21478502,21478613..21478855,21478938..21479053,21479137..21479233,21481278..21481370

Expression

GEO Profiles:Os09g0527900

Genome Context

<gbrowseImage1> name=NC_008402:21478060..21481626 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21478060..21481626 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggacgatctgcgacgtgtgcgagagcgcgccggcggtgctcttctgcgtggccgacgaggccgcgctctgccggtcctgcgacgagaaggtgcatatgtgtaacaagcttgctaggcggcacgtgagagttgggcttgcagaccctaataaagttcaacgctgtgatatatgtgaaaatgcccccgccttcttctattgcgagatagatggtacatcactttgccttagttgtgatatgactgttcatgttggtgggaaacgaacccatggaagatacctgctcctaaggcaacgggttgaatttccaggagataaaccaggtcatatggatgatgttgctatgcaacagaaagatcctgaaaaccggacggatcaaaagaaggcccctcactcagtaacaaaggagcaaatggcaaaccatcataatgtgtctgatgatccagcctcagatggcaactgcgatgaccagggtaacatcgattccaaaatgattgatcttaatatgagacccgtccgtactcatggacaaggttcaaactcacagactcagggcgtggatgttagcgtcaacaatcatgattctccaggagtggtgccaacatgtaatttcgaacgagaagccaacaaataa</cdnaseq>

Protein Sequence

<aaseq>MRTICDVCESAPAVLFCVADEAALCRSCDEKVHMCNKLARRHVR VGLADPNKVQRCDICENAPAFFYCEIDGTSLCLSCDMTVHVGGKRTHGRYLLLRQRVE FPGDKPGHMDDVAMQQKDPENRTDQKKAPHSVTKEQMANHHNVSDDPASDGNCDDQGN IDSKMIDLNMRPVRTHGQGSNSQTQGVDVSVNNHDSPGVVPTCNFEREANK</aaseq>

Gene Sequence

<dnaseqindica>3125..3211#2772..3014#2574..2689#2394..2490#257..349#gagttcctccctcctcgctcgccacaatctctctcccggcttcgttcctcctctcgccccgcgactcccgctctgctcctcctcgtcgccgccgccgccgccgccgccgccgccgccgccgctgtgtgtacgactacgacggcgaagagccaggcggggaggaccgatccgccggaggaggaggaggagggagtgggggggcggggagatgggggagggggggcgatgacagcgggcgcggctcggcgcgggcgggatgcggacgatctgcgacgtgtgcgagagcgcgccggcggtgctcttctgcgtggccgacgaggccgcgctctgccggtcctgcgacgagaaggtgccccctctctctaaccctgccttcgtcctctgctctacaacgcgcacgcgtcggagtccgcttgccgaatcgtagatcgggttatgcgatgcttcaattgcggtcgcttgtttcacgctgggcgatcgggttgtttgattgtgcaattaagatctcacgagatggtttactacgctcgaattagcgtgtggatctgcgtgtttcttttttgggtacagaaagccatttaattttgactgcgaatcaactgcgtactgctcactggcctggagcaattcattcattaaggccttttttttttcattcgttgagtattgtggacttatgaccaaacgaagttatggtataataggatgccagcgtgcattgatagtgactaactgtagtgcttgtttgggtagtaaccgagaaattgccttatggggtatccacttatttcttgtctgacttcaaaatgaggcctattgcctagagaattccacttgaaattaaagctggccaactttagaactggaaaacaaagcataattctatgatgttgttatcgaaggaggcacttttacagcataaaacatacataataagttcaaataagtacttgaatccagcaattgggttacttcggaacgggatttcttagaagatcacactaccctgagttctatatctagcttggtggtcgttagacacctccaggcatcatcattcatggccatatgtgggacagtgcgagatgagcttgtcgtgattttgccattttggttggaatttctgttaaccttattggctatgtgtaatacttaagtcgatcattgttctgtagaagtaatgattgaatttcccttgttgaaattcttcaatagtaaagaaatagttaggtatagattttgcacttgtgtttacacgatttttcagtccatatgtttactgttatttgtagccaagattatgcttctgcctcactttaattgcagaatgcagagtctgaattgcagattttctagagttaatgaataccccctccgtcccaaaaaaagtccaatcctgaacacattcgtgtccagattcgtagctagggtttgcttttttatgggacagagtagtatgtcttatactatgttactgtacatgattccagtcgctaccttcaattgctaataaaaacatacatgagagcatcctttactcattctttagctgctcaactagttttgcgctccgtaaccaatgctatgacactggtttctttggttttttataatatttggaactgatgacatgattaaaaatcatcagtacgtgcaaaagtgcaaccaggttgtagatgaaagttccaaccggaaatggaattgttgtatgtgggtggccccatccctaatgaggccaaacattatgaaacatccttcgtgggcagatcttttggtcaaatatcccattgtgctctcacattcttatattatattgatttacccattaaaacattgtacgtctattctgttttacgactatgttttgagcagttaagttctcttccaactatgaaaggtcatcttttctggttcttagtccttacttatgtctttatgtcagttgagcacctgtttaatgagttaataaggtttgtcagtaatggatctgctgaagaacacgatgtatgctgattatgtgcaggcaacataagaaatcagatactgttaataaagctgacatttttgcatggatttgtttactgaaagtttgccagattggttgttgtactctgtatgttagagatgcatatccatattcagctctatgagaacttcgatcaacaaaattactcgctccattgattgttataagatgtattttggtttgaagaggccaaactttgtagattttgaccaacaatcagtctatacaagttattttagtagctgtgcaatatccttcatgtggtatcattagcatgaagaaaaacaaatattacagctttggtctcaataacccattaaatattcatgctgcattttctgatatttcttccaatgttgtgatgcaggtgcatatgtgtaacaagcttgctaggcggcacgtgagagttgggcttgcagaccctaataaagttcaacgctgtgatatatgtgaaaatgcccccggtattctttcttatttatgaatagtttcttatcatattttgcctgttaaagcttgttgtgattatgtcctgctgtccatgcagccttcttctattgcgagatagatggtacatcactttgccttagttgtgatatgactgttcatgttggtgggaaacgaacccatggaagatacctgctcctaaggcaacgggttgaagtaggttattgtttagaaaccaacttcgtattgtaatctcacgccttattttctagtgcttgaagtttgaaattttgattagtttccaggagataaaccaggtcatatggatgatgttgctatgcaacagaaagatcctgaaaaccggacggatcaaaagaaggcccctcactcagtaacaaaggagcaaatggcaaaccatcataatgtgtctgatgatccagcctcagatggcaactgcgatgaccagggtaacatcgattccaaaatgattgatcttaatatgagacccgtccgtactcatggacaaggttcaaactcacaggtacatcacattctccatgttaatgcaatgggctcatctattattacctttaccgatcactcacattttcctctctggtctatgctcttcccttactgatgacaaaccagactcagggcgtggatgttagcgtcaacaatcatgattctccaggagtggtgccaacatgtaatttcgaacgagaagccaacaaataaataccgtaacaccaggatgtacatttcttcggttgctgctatatagcagtagctctccgggaggttggattagctttggtcttcagccaggcagaatatgtgttattacatggtcctcttgtgtcgctagtagtatgattctagtagagctgaagttgaacgagttcatgtcaactcggcatgccatatgccgtggacgctatttatcgtcgtgtactcgtgttgtggttgtaagactggtgtcacatgggccatacgggaagcacagtgggctgtcacttgtgcttttgtggattgctgctgtgcgctattagaaactgttcaaaagattaatagacccatcattttttttcggt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0527900, RefSeq:Os09g0527900