Os03g0334800

From RiceWiki
Revision as of 19:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0334800

Description

Lung seven transmembrane receptor family protein

Version

NM_001056566.1 GI:115452860 GeneID:4332753

Length

5156 bp

Definition

Oryza sativa Japonica Group Os03g0334800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:12431061..12436216

Sequence Coding Region

12432328..12432454,12432741..12432877,12433333..12433428,12433831..12434764,12435760..12435950

Expression

GEO Profiles:Os03g0334800

Genome Context

<gbrowseImage1> name=NC_008396:12431061..12436216 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:12431061..12436216 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcggcggcggggcctcgccgcgctcgccgtcctcctcgccctcgcggcgcgcggcgcggacgcgtccgtccacgagtactcgggcggggggttcgcgccgcgggccaactccttcttcttccacggcggcagcgaggggctgtacgcctccgaccccacctccaactcctccgcctccttcatcaggtttgactctgtcacatttcgacggacccaggagtcagcaggtaggcatgaggctatgcagcaaaagacagggttagttgaggctattattgttgagatccaggacagaagcaagattggtggttcttacttgcattctgatgcaatatgctgcactcctgagctcgataaagagaagtcctgcaaagttggtgaagtaattatacagccaaatcctgataatcctgactggccaaaaagggttcagacattttttagtggtagagatgaagaagctagcatggtcacacaagttgtatctataaacaaaacagggatgtactacctctattttatgttctgtgatccacagctcaagggattgaagattacaggcaggactgtttggcgaaacccacaaggttatctccctggtaaaatggccccaatgatgacattttatggtttcatgtcgcttgcatatcttgtacttggacttctgtggtttcttcagtttgtgcgatgctggaaggatattttgcagctgcactaccatataacagctgttattgctcttggcatgtgcgagatggctttctggtactttgagtatgctaacttcaattcgactggaaacagacctatggctataaccttgtgggcagttacatttactgctgtgaagaagaccatatctcgccttcttttattagtggtttctatgggatatggtgttgttagacccacattaggtggggttacatctaaagtaggtgctcttggtgtcgtctattttattgcttcggaaggtcttgaacttgttgaaaatcttggaaacatcaatgacttctctgggaaaacaaggttatttctggtgttacctgttgccatacttgatgctaccttcattatctggatattttcatcgctctcgagaactttggagaagctccagctgcggagaagtatggcaaaacttgaattgtatcggaagtttacaaattctctagctttgtcagttcttatctctattgcttggattggctatgagctatacttcaatgcaactgatccattgagtgagctatggcgaagggcttggatcatccctgcgttttggaatgttctctcctatgtcctccttgccatcatatgcatcctttggtctccgtctcgcaatccaacagggtttgcgtattcggaggatacagctgacgaggctgatgaggaaggtctctctcttgtaggcagtgctgtgaaaggaactggagacatagtgaacatgcatgtgtttccagaggataaacgtgcatga</cdnaseq>

Protein Sequence

<aaseq>MQRRRGLAALAVLLALAARGADASVHEYSGGGFAPRANSFFFHG GSEGLYASDPTSNSSASFIRFDSVTFRRTQESAGRHEAMQQKTGLVEAIIVEIQDRSK IGGSYLHSDAICCTPELDKEKSCKVGEVIIQPNPDNPDWPKRVQTFFSGRDEEASMVT QVVSINKTGMYYLYFMFCDPQLKGLKITGRTVWRNPQGYLPGKMAPMMTFYGFMSLAY LVLGLLWFLQFVRCWKDILQLHYHITAVIALGMCEMAFWYFEYANFNSTGNRPMAITL WAVTFTAVKKTISRLLLLVVSMGYGVVRPTLGGVTSKVGALGVVYFIASEGLELVENL GNINDFSGKTRLFLVLPVAILDATFIIWIFSSLSRTLEKLQLRRSMAKLELYRKFTNS LALSVLISIAWIGYELYFNATDPLSELWRRAWIIPAFWNVLSYVLLAIICILWSPSRN PTGFAYSEDTADEADEEGLSLVGSAVKGTGDIVNMHVFPEDKRA</aaseq>

Gene Sequence

<dnaseqindica>3763..3889#3340..3476#2789..2884#1453..2386#267..457#accgctaaccactctcgcctcctcccccgtctgtactgactactgagatggaagcgagcaagtgaaagagagagattcctggcttcctgcctcacgcgcacgcacaccaacctcaagccatcgggctctctcaccccgcacttctcccaccgccaccgaggcacggctctcgaaccttcccactgcttcctccctccctcccctcccctccccgcgacgagacgagacgagaccggcggcggcggccggagtcaagagccttccctatgcagcggcggcggggcctcgccgcgctcgccgtcctcctcgccctcgcggcgcgcggcgcggacgcgtccgtccacgagtactcgggcggggggttcgcgccgcgggccaactccttcttcttccacggcggcagcgaggggctgtacgcctccgaccccacctccaactcctccgcctccttcatcaggtgcgcgttcggcgctgaattttccccgtctctcctcgcgcgctagggtttttgtcgggggggatcagacggtcctgatcctgatcgggcgcgtttcacttggggtttcggattccccgggggtttggatcagatgcgctggtcaaatgtcgcacctgtaaatctcgatcggagattttttagaaatttatgcgtacatggattgatccattgggatgatctgaagtagctagtactaaaaattgattcttttcttcgttcagttcatgtgatccgatatctattactgtattcgaccagctaacttaattttgttttattattcgtactgccatgtgattaggttgctattcagggatttttttttattattcggttttactgccatttgattacgctgctattcagggagtgctagcaccttttgtttctacaataagcatttttgttgggtatgaaatgtgttcgttatttaccaccacgacaaggtgatctgcgtacccgccatgtcaaatattggagcagtagcatgtaattaacacacatggcacaaacaacatggcagtagcataactacacggtggccaattttggagtatccatttgatcaagcatttttttccatgatcatttgtattaaatgcatgggtaagcacagacatactccctccatcccaaattgatcatcttataaggtttgtgcaccaagaccaatgataatttaaaccacatcgatcaagatgtcatgcacaatatgcacacattctcccacaatgcatgcatcgattaaaacacaatgcacaattaaaacctttagcatgcacacattctcctgtgttgtattaattatattccgatgaaatccgtgtccatacggttacatgatgatcaatttgagaaattttagctttcattatatgatgatcaatttggaaagaagggagtactatggaaagaagaatgccatggtcttatttcactggtatctctttcaggtttgactctgtcacatttcgacggacccaggagtcagcaggtaggcatgaggctatgcagcaaaagacagggttagttgaggctattattgttgagatccaggacagaagcaagattggtggttcttacttgcattctgatgcaatatgctgcactcctgagctcgataaagagaagtcctgcaaagttggtgaagtaattatacagccaaatcctgataatcctgactggccaaaaagggttcagacattttttagtggtagagatgaagaagctagcatggtcacacaagttgtatctataaacaaaacagggatgtactacctctattttatgttctgtgatccacagctcaagggattgaagattacaggcaggactgtttggcgaaacccacaaggttatctccctggtaaaatggccccaatgatgacattttatggtttcatgtcgcttgcatatcttgtacttggacttctgtggtttcttcagtttgtgcgatgctggaaggatattttgcagctgcactaccatataacagctgttattgctcttggcatgtgcgagatggctttctggtactttgagtatgctaacttcaattcgactggaaacagacctatggctataaccttgtgggcagttacatttactgctgtgaagaagaccatatctcgccttcttttattagtggtttctatgggatatggtgttgttagacccacattaggtggggttacatctaaagtaggtgctcttggtgtcgtctattttattgcttcggaaggtcttgaacttgttgaaaatcttggaaacatcaatgacttctctgggaaaacaaggttatttctggtgttacctgttgccatacttgatgctaccttcattatctggatattttcatcgctctcgagaactttggagaagctccaggtagcaacttcacggccttgctaattcaagtaaacaatttaattctgttttatgtgtgcttggatatatcacccttgctgttattataattattgtttgcccacaccacattgcttttaatatcacaaagaaaaccccgatctttctgaaaggaattacaaagcctttctccagtaaatctgtaccttgttgttctttgttcaatttcccattcaatacttcatcatagccatgcctttcttgtttcagcaattaatatttatgattacatgtccaatgaatttgattattttgttttttaatatatgtgctataaaaatgacttccagttgatttatgtttattttgtcgacatctttctgtaatatcccctgtactgattcggctctaattacattccagctgcggagaagtatggcaaaacttgaattgtatcggaagtttacaaattctctagctttgtcagttcttatctctattgcttggattggctatgaggtatgaacttgtcaattctatagtcctatttgagatggtagcaaatgttgaattaatcaacactcagggatccttttcttgctgttatatatgatgcacatatttagattatgatgtgaccatttaataacaacttcctcattgcttctgataatggttgatgaatataaagagtcaacgctcagatccttctcccatcttcctatttgacgaacattaatattgagattagaatgtgactgtactacctcgcacattttatttccatatgtggacttgtggaggtggattttattacaaaaaatgataggatacatcaatatgtgatatatcactccacaaacatagaagttcaaattttactgatacaagtactttttttctagagttgcttgatgaatcatctcgagccatgctttaacagcatgacctgacttctttttgtcttgaatcagctatacttcaatgcaactgatccattgagtgagctatggcgaagggcttggatcatccctgcgttttggaatgttctctcctatgtcctccttgccatcatatgcatcctttggtctccgtctcgcaatccaacagggtactgaacctgcaatgaagtttactttctcagttgacaagtagaattatttgtttgagttatctttttgtataagtagtagataggttatttcactttgaacacactagacccctagcaagtcataagggttatacatcttgggtttgctatagactatagacaaatgccttgttttttctttaaagcattggacttgggacgaccctgtgttttaagaaatacaggacattttctgtcactatgtacaaaattttgtcatttatgctgtctgtgctgtgtacaggtttgcgtattcggaggatacagctgacgaggctgatgaggaaggtctctctcttgtaggcagtgctgtgaaaggaactggagacatagtgaacatgcatgtgtttccagaggataaacgtgcatgacaagttgtcatctttagtgcagctgtactcctggctgagtgctatggtaagttcaagttgcccttttgtcctccaataacacacatttgaaatgcgtgtatgggaggcaaaccatctttccaataccgtctagataattttttttgtacatagaatatttaggattagtggactctagtggggattcgtgcaatggatatgtatgtgcctattctatgttttaatgccgtttctattatcactatgttccttctgagtgagatcaatgctccaggtcaattctggccttgcaatctcctgtttatatattatatttgtttacaatgctctactctgcatgaaggtgcggctgtgtttttatgccatatgataacatctttagtgatcaaccttgttaagcgatcctatagcagctacataacatctttatttttattcattaagtgaatgcaaccctgtctggctcacagctttaatgttgtaaatatttttctgtccatggaagtcgttgagacaaaactggaacacaattcaattatcatgatctgttaaccataactagagcagtaaactgaattgccttcagctttgttcttctttttccttggtagtttaaactttttgcaagattttcacatgatatgatatctgttattgccctcctagtttttctaaatcaatttgacaatattgcaagtattatcatgctaacttttgtccttgttcttgattgcagtgaagtaccgtttccctctgcattcatggcaagcttacgacttctgaagcttgcgtgcagtcccagtgtacaggtcgtgactttgtatggaaggatttgacttctatagaattttactcaatccgttgatgactatccaatacaaaaatgtgcgggaaataaacaatgacttggagagcgtgctggggttacttgctgtaattcctgcgcatggtgtggcgtgtgtagtagactcgtaggtcttgtttggtagaagcgcacattgttaaacacattgactgcatccccacgtaacgttggtatgatgacctcgtgccagttgcttatgcattgctcgcacgtatgagatatggaatgatttaattctgggtgtttattcaaggttcaccaaaccgttttgagtgagtttggtggtagctgcatggttatcacgaggtatacccgtgattttgaaaactgaaggttaacgcatcactgagaaggtcacagtatgcgttaaccacgataatacttaatacatatattttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0334800, RefSeq:Os03g0334800