Os03g0344100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os03g0344100 |
|---|---|
| Description |
Similar to ASF/SF2-like pre-mRNA splicing factor SRP32 |
| Version |
NM_001056617.1 GI:115452962 GeneID:4332806 |
| Length |
4668 bp |
| Definition |
Oryza sativa Japonica Group Os03g0344100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:12866603..12871270 |
| Sequence Coding Region |
12866994..12867080,12867491..12867556,12867672..12867746,12867829..12867937,12868028..12868074 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:12866603..12871270 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:12866603..12871270 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagggagagggaggtggaggatctcttctacaagtatggccgaattgttgatattgacttgaagatccctccgaggccaccaggctatgcttttgtagagtttgaagatcctcgtgatgctgaagaagcatgtgctggcagggatggttataactttgatggacatcgtctaagggttgaacctgctcacggtgggagaggtaatggtggttcctcctttgaccgccccagcaactttggtggtggaggacgccgtggtgtgtccaggcactcagaataccgtgttctggttactggtttgccttcttctgcatcatggcaagatttaaaggaccatatgcgcaaggctggtgatgtttgtttctcagaagtgtatcgcgagggcggcggtactgtagggattgtggactacacaaactatgatgacatgaaatatgctataaagaaacttgatgacagtgaattcaggaatgccttttctaaaggtcacataagggtgaaggaatatgatggcaagcgcgcccgctcctattcacgtagccgaagcccaagtcgtagccgaagcaaaagcaggagtctaagtaaatctcctagaactcgccgttcagcatcccgatctcgatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccatcaagacccgattatctcttcatttatctgggattgtgcggcgatctggggattgcgcattag</cdnaseq> |
| Protein Sequence |
<aaseq>MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRP PGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGR RGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDD MKYAIKKLDDSEFRNAFSKGHIRVKEYDGKRARSYSRSRSPSRSRSKSRSLSKSPRTR RSASRSRSRSRSVSSRSRSASKGRSPSRPDYLFIYLGLCGDLGIAH</aaseq> |
| Gene Sequence |
<dnaseqindica>392..478#889..954#1070..1144#1227..1335#1426..1472#1569..1626#2366..2415#2632..2688#2772..2857#2931..3032#3549..3606#atcttttcccagtctccgcgacctcgagcggtcataaaccctcctctcctccccctctcccctcctcttccccgtgcgacccgcccaacccaaaccctaggtcacccagcgccgcggcgcccccggtacgaatccctcctcctcctcctccctctctcgattcgcgcctcgcgtcgtcgtgctaccgcgccccggttccccgccccacctccgaacctagctgcgggcggtggtgcggggagttttttttttttttttttttggggggggtcgatttgctatttctttttcttttttttttggttttttgcggcgcgctgcttgcagggtctgatcagtggtggttggttcttggttgtttataggttgctgacttgccgcgggaaggaggatgagcaggcggtggagccggacgatctacgtggggaatctccctggtgacatcagggagagggaggtggaggatctcttctacaaggtcggtgatttgtttttttctctcttttgtgtagatagtgttagcagaaattgtcaagctattttttatgccacatgttactccgtatatgcttagattcagttttccataatttagctaactggattcgatcgacttatatatattactataaaagagaactgataagtcctgtacataagttaatgggaaataagtaaggcatggctgtgccgaaagaaaacggaaaaaaaatgataatcttgtttgagaaagctgatgggtaaatttacttatttggaaaagttggtttaccgctgatatccggcatctcgagtcaacatatgtgcttgagggtgtgtttacaattgatttgtcgggcatgattcaatgtcccggggtctaatacttttttacattgtttcatatagtatggccgaattgttgatattgacttgaagatccctccgaggccaccaggctatgcttttgtagaggtaacatactcccagatgtttcacataatgtttatttggtcttggaatgagaccttcctgttgttacatacttaaggtgccgcatgctaatataatttgtgccctaactttttagtttgaagatcctcgtgatgctgaagaagcatgtgctggcagggatggttataactttgatggacatcgtctaagggtaatgacactagaataaataagttacttcttgatgtcctttgtttttgatttatctgtataatggccgcaaccatctgcaggttgaacctgctcacggtgggagaggtaatggtggttcctcctttgaccgccccagcaactttggtggtggaggacgccgtggtgtgtccaggcactcagaataccgtggtatgactctcatctatgtccaaattgatgtttaatgctcaattctattctactccgtgatgtttttaatgatttatgcacttcacacagttctggttactggtttgccttcttctgcatcatggcaagatttaaaggtttgttgcaagcacatttccttttcaatgtaaaattaaaacgacttattcccttggacaaccagtaacattttcttatgaacatttgcttctcaggaccatatgcgcaaggctggtgatgtttgtttctcagaagtgtatcgcgagggcggcggtaatacacatattttgtgcccacagctataagtttttatttagcttctgtagtatccatcgtacataatagacactcctactcaccccctcctctccttgtcctgattcatagctcaagggagctataccttgggacagagggtgtatttgttgaacatattgttcaggtttataccataagtaaatacactcagttggtcatttctatgacgaaattaacagctccaactctcccaacccataacatacacgtggtcataccaatattctcaagattatctccgaagcaggataatttaggtccattctgaaagaatttttatatacaggaaaacacatttgaaattcatttttcttttgtttcctatgtcatcatggttattctttatcaagtattacaaactactctctttccatagttttcctatctacctcaaatattctaccaaaaaaacatacctggttgttatctctttgtaatgcccccccctctaatagtggtcaattgccctctttgtttgtgcttaaggtgggggcctaccggcccagcaatccctgctgtgctgggtctctctttgctctgtttatcacagttgtagttctagggttttagctgttggttggtatgccaatatgccattgtagtcctctgaatatatgcattgtacaactatctgaagcaataattcttctatatggttattgaggtagagacttatgttttcattttgttgcaggtactgtagggattgtggactacacaaactatgatgacatgaaatatgctgtaagcttatatgttaataccttttattacattctttagcttgtgtgaaatatttcatctgagaactttctttctctgtaatctgtatggtttatgacactctattttgtatttttatggcagtcggttacttttgtatctagcattctagttcagtcctagcattgtgatcctgatagtttaaatgttctcttggttgctgatcattatttgcagataaagaaacttgatgacagtgaattcaggaatgccttttctaaaggtcacataagggtaaactgttctttcctctctctttttttatggttgagccctggaatcagtttctctggctaaccatgtacttcttatcataggtgaaggaatatgatggcaagcgcgcccgctcctattcacgtagccgaagcccaagtcgtagccgaagcaaaagcaggagtctaaggtctttttatcatattttgatctccgtgggtaaaactgttgatgacttaactcatattgaatatgctgtgcagtaaatctcctagaactcgccgttcagcatcccgatctcgatctcgatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccatcaaggtaacacgcatctgtcgtctatctaattatatttttaattcttaagtcaaactctttatagtatcctcttctggggcacatcatgtcctccaaagaagggaaaaaagggcagatcacagcatgatctgatatgcgcacataccataaccatttcctatcatgctcccatattaccaaataagtcttgtgcattaatttgttaatttgaaaacagtgaccagcatttgttcccctaacaatatctctgtgctctgcattatctatgcctgaggcattggttgttgaccgttccatactgcatgtggcatctgattagtgtctggctcttttttggtatatgataagtaatcacttggcatcattagttaaattcactaacttatctgtgtttccaaacttacctaataataattgtcgatttgctatactagtatttatttccttgggaatttccttctcaagtacagcttctattataaactatatgaactgcttagcctcatttgttttgtgaagacccgattatctcttcatttatctgggattgtgcggcgatctggggattgcgcattaggatattgaggatgggatttcctcaatttgctcttggttgtatgaggtatgcccatttattgagagcttctatggaaagctaaaatgatccaattatttgacctaatgcactgtaactgattgccatcagagattgggcatagcgcattgtttggaattctggacataggagcattaaggattgacgatatttggataatgatggtacaatgactaggaatgtgcttggcgttcaatgcttgaggaatgagttctctccctacctttggcatgctatatatggtggttgcgtcttgcatgcattatttgcattcaatactacatatttttggacttaattatgtgctcttaatctcttgttttcattgggctattttcactttcatttggtcggtgcaatgctggacaaagcatcaaggtttttggaataagctgttagacccgcattttggatattgaatatggttgcttctcgacttcttttttgcagatcaccagcaagatccaaatctccaaatgcttctgtaagttcccttcatactattaaaaatttcctttttctttcacttccgtttgttttacttaacgtgttgtttcctaaatatacttcccccagcctgcaaatggtgaagcatcaagccccaagaaacggagcccaagcaggagcccatctcgttcacggtctcctgatgtatgcattcgtcacccatgtttccttgacttccaaacattgcatggttgattgttgtgcttacactaatttaattatgtttccaggcgaaatctgaatagaagtgatatgctgatgtgagcagtgacacggacttctcatgtacggctatttgctgtccttgatgtccgattacatccgaatcttagctgtggtgcaatgaagctccattaaatttgatactatgaatttgtagtaatgaaaacatcaaactatgcacttcatgtggccttctgtggctggtcttgttcccttgggtttttggtagttcgccgaatgctactatctggattatttttactcaaaacatatgtcggatgcttattgatttcc</dnaseqindica> |
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