Os05g0129200

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0129200| Description = Similar to CEL2=CELLULASE 2 (Fragment)| Version = NM_001061078.1 GI:115461886 GeneID:4337698| Length = 1902 bp| Def...")
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Gene Name

Os05g0129200

Description

Similar to CEL2=CELLULASE 2 (Fragment)

Version

NM_001061078.1 GI:115461886 GeneID:4337698

Length

1902 bp

Definition

Oryza sativa Japonica Group Os05g0129200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1685217..1687118

Sequence Coding Region

1685217..1685843,1685968..1686114,1686214..1686300,1686441..1687118

Expression

GEO Profiles:Os05g0129200

Genome Context

<gbrowseImage1> name=NC_008398:1685217..1687118 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1685217..1687118 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttgcggctgcgatagagttggtggtgatcgcgacgagctgcatggtgcgcgacgcccatggccacgactaccgcgccgcgctcgccatgtcgctgctctacttcgagggccagcgctccggccgcctccctcccgcccagcgcgtccagtggcgcgccgactccgccctcgccgacggtgccgaccaccgcgtacctgacctcgcctcgccgccgtcctcgaacgtgtccgtgtgtgcgcgcactgacgcaatgcaatgcgatatgcaggtggacctcaccggcggctactacgactccggcgacaacgtcaagttcgggttccccatggcgttcacggtggcggcgctgtcgtggagcgtcgtggagtacggcgaccggctcgacgcggcgggcgagctgggccacgcgctcgacgccgtgcggtggggcgccgactacctcaccagggcgcacgcgtcggccggcggcggcgaggcgctgtacgtgcaggtcggcgacggcgactccgaccactcgtgctggcagcgccccgagaacatggacacgccccgcacggcgtacatggtgaacgcctccagccccggctccgacatcgccgccgagacggccgccgcgctcgcctccgccgccgacgccaacttctcctccacgctcctgctgcacgccaaacagttgtttgagtttgccaagaatcatcgtggcttgtaccacaacagtgtaccatcagctgcaaagttctacgctagcagtggcgatgaggacgagctgctctgggcggcagcctggctctacatcgccaccggcggcgaggaagagtacagcgcctacatcgccggcgccaccaacgtcggcggcgtgcgctccatgttcagctgggacgacaagttcgtcggagcgcaggcattgcttgtcctccaggggaagctgccggccgatggcagccacgccgagatgaagacaaacctggagcagttcatctgcaacctcgtgcagcactccggcggcaatggcggcggcggcgggggagccaggctcagccccggcggcatgctgtggtgggactcatggaacaacatgcagtacgtgaccctggcgtccctcgtactcgccgtgcacgccgaccacctgacggcggcgaggtcggcctccctccagtgcggcggtggcgcctcgcggtcgccagcgcagctcaccgcgttcgtgcggtcgcaggtggactacatcctcggctcgaaccccgagacgatgagctacatggtcgggtacggcagcaggtacccggcggaggtgcaccaccgggcggcgtcgttgccgtcgatcaagtccagcccggcgaaggtcacctgcaagggtgggttcgactacctcaacaagggctcaccggatcccaatgtgatcgccggcgccatcgtcggagggccggatgccgatgaccggtacgacgattcccggcagaatttccggcaggccgagccgtccaccgtcaccgtcgcgcccatcgtcggcattctcgcaaggcttctcccttcgtag</cdnaseq>

Protein Sequence

<aaseq>MLAAAIELVVIATSCMVRDAHGHDYRAALAMSLLYFEGQRSGRL PPAQRVQWRADSALADGADHRVPDLASPPSSNVSVCARTDAMQCDMQVDLTGGYYDSG DNVKFGFPMAFTVAALSWSVVEYGDRLDAAGELGHALDAVRWGADYLTRAHASAGGGE ALYVQVGDGDSDHSCWQRPENMDTPRTAYMVNASSPGSDIAAETAAALASAADANFSS TLLLHAKQLFEFAKNHRGLYHNSVPSAAKFYASSGDEDELLWAAAWLYIATGGEEEYS AYIAGATNVGGVRSMFSWDDKFVGAQALLVLQGKLPADGSHAEMKTNLEQFICNLVQH SGGNGGGGGGARLSPGGMLWWDSWNNMQYVTLASLVLAVHADHLTAARSASLQCGGGA SRSPAQLTAFVRSQVDYILGSNPETMSYMVGYGSRYPAEVHHRAASLPSIKSSPAKVT CKGGFDYLNKGSPDPNVIAGAIVGGPDADDRYDDSRQNFRQAEPSTVTVAPIVGILAR LLPS</aaseq>

Gene Sequence

<dnaseqindica>1276..1902#1005..1151#819..905#1..678#atgcttgcggctgcgatagagttggtggtgatcgcgacgagctgcatggtgcgcgacgcccatggccacgactaccgcgccgcgctcgccatgtcgctgctctacttcgagggccagcgctccggccgcctccctcccgcccagcgcgtccagtggcgcgccgactccgccctcgccgacggtgccgaccaccgcgtacctgacctcgcctcgccgccgtcctcgaacgtgtccgtgtgtgcgcgcactgacgcaatgcaatgcgatatgcaggtggacctcaccggcggctactacgactccggcgacaacgtcaagttcgggttccccatggcgttcacggtggcggcgctgtcgtggagcgtcgtggagtacggcgaccggctcgacgcggcgggcgagctgggccacgcgctcgacgccgtgcggtggggcgccgactacctcaccagggcgcacgcgtcggccggcggcggcgaggcgctgtacgtgcaggtcggcgacggcgactccgaccactcgtgctggcagcgccccgagaacatggacacgccccgcacggcgtacatggtgaacgcctccagccccggctccgacatcgccgccgagacggccgccgcgctcgcctccgccgccgacgccaacttctcctccacgctcctgctgcacgccaaacaggtactacgtttcttacatgcacaatgcaatttaatttaatttatataaatccattcataaatctatttataacctaaaatgtcttataatgtgaaacagaataagtagtatttatctcgattaaacacgctgttttgcagttgtttgagtttgccaagaatcatcgtggcttgtaccacaacagtgtaccatcagctgcaaagttctacgctagcagtggcgatgaggtgcgtagcaatggcatgcataacgatcactgatagctgacagctctgatgaataagtcattgatagtttgatttggtcgcttgatgacaatggaacaggacgagctgctctgggcggcagcctggctctacatcgccaccggcggcgaggaagagtacagcgcctacatcgccggcgccaccaacgtcggcggcgtgcgctccatgttcagctgggacgacaagttcgtcggagcgcaggcattggtcaccaaggcactaaacctatcctcctcctgattcgatcttggtcatgttaattaatttctgcttaatttggattgcggaattaagttaacattatacaattaattaatcttgcattatgcagcttgtcctccaggggaagctgccggccgatggcagccacgccgagatgaagacaaacctggagcagttcatctgcaacctcgtgcagcactccggcggcaatggcggcggcggcgggggagccaggctcagccccggcggcatgctgtggtgggactcatggaacaacatgcagtacgtgaccctggcgtccctcgtactcgccgtgcacgccgaccacctgacggcggcgaggtcggcctccctccagtgcggcggtggcgcctcgcggtcgccagcgcagctcaccgcgttcgtgcggtcgcaggtggactacatcctcggctcgaaccccgagacgatgagctacatggtcgggtacggcagcaggtacccggcggaggtgcaccaccgggcggcgtcgttgccgtcgatcaagtccagcccggcgaaggtcacctgcaagggtgggttcgactacctcaacaagggctcaccggatcccaatgtgatcgccggcgccatcgtcggagggccggatgccgatgaccggtacgacgattcccggcagaatttccggcaggccgagccgtccaccgtcaccgtcgcgcccatcgtcggcattctcgcaaggcttctcccttcgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0129200, RefSeq:Os05g0129200