Os03g0347800

From RiceWiki
Revision as of 19:35, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0347800

Description

Peptidyl-tRNA hydrolase family protein

Version

NM_001056636.1 GI:115453000 GeneID:4332828

Length

4770 bp

Definition

Oryza sativa Japonica Group Os03g0347800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13083242..13088011

Sequence Coding Region

13083622..13083630,13083784..13084011,13084083..13084167,13084290..13084357,13084923..13084973
,13085048..13085167

Expression

GEO Profiles:Os03g0347800

Genome Context

<gbrowseImage1> name=NC_008396:13083242..13088011 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13083242..13088011 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgactgccgcatctgtttttggatctggtggatgtttggaattactaacgtcgagtaaagccatgcgaggaaagctttggacaagacttgcccctttcatatccaagcgtcatgcttcaacctctcagacctcattatcttcatcttcttcgtcatgctccgtgataaatccatggctctttgttggtctcggcaaccctggtgagaagtatcaatgcaccagacacaatgttgggtttgatatgatagacatgtttgcacagtctcagggtatatctctaaccaggcatcccttcaaggcactatttggggaaggaatggtcgaaggtgtacctgttttgcttgctaagcctcaaacatatatgaatctcagtggtgaatctgttgggccacttgctgcctattataaattaccacttaatcgcgtccttgtggcatttgatgacatggacctgccctgtggagttcttcgtttacaacctaaaggaggatatgggcgccataatgggtctgttgattttataatcatgtgttttaatgaagtaatttgttga</cdnaseq>

Protein Sequence

<aaseq>MAMTAASVFGSGGCLELLTSSKAMRGKLWTRLAPFISKRHASTS QTSLSSSSSSCSVINPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFK ALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLR LQPKGGYGRHNGSVDFIIMCFNEVIC</aaseq>

Gene Sequence

<dnaseqindica>381..389#543..770#842..926#1049..1116#1682..1732#1807..1926#tccctcgcttccagctccgaaagcgccttccccccaagcccagcggcgtcgctgcctccctcctcggcgatcgccgcctccatttctcgcgctcgaggtccgcctcctttgcgccggcggcttgctggctggttgcttccccgccgcgtgcctcggaggggaccggccgtttcttgttgccctccttgcttgcttgcttgcttcctccccctcgtcgccgctcactccgcagcgggggtccccgccatatgtaagcagcatctcgacgatcttgtgtcgcgtagcctctaaacctgtgtgatttacaaggattagggcgtcgaattagacttccccgtgtaggtgtgcatcagagctgttcgacgtaatgcccgtgccgcatggcgatggttagtggcgcgcttccttccatgattgccatgtgtattgccgtattggcgttgaatgagcgaggcttattaatagtccacatcattttgattgctatgtatactattgtttctgttgtgtgtccgaaagaataatctggtcttctgctgcagactgccgcatctgtttttggatctggtggatgtttggaattactaacgtcgagtaaagccatgcgaggaaagctttggacaagacttgcccctttcatatccaagcgtcatgcttcaacctctcagacctcattatcttcatcttcttcgtcatgctccgtgataaatccatggctctttgttggtctcggcaaccctggtgagaagtatcaatgcaccagacacaatgtaagctttgcatctcattcttgtcttggtcatttattttcagaatcctatgacaccctttttcgctgcaggttgggtttgatatgatagacatgtttgcacagtctcagggtatatctctaaccaggcatcccttcaaggcactatttggggaaggtctggttcattacatctgatcccatagagaatgtatttttatattttgagcaatatatactctgttctctcggttgaaagggctgaattgaaactgttgtcttgtctttccattgatgcaggaatggtcgaaggtgtacctgttttgcttgctaagcctcaaacatatatgaatctcagtggtgaatctgtaagcatcacttttagaagtctttccatgttttagtatctgatttctactattccttactatcttggaataagtctatttcgtgtcaactcttggcatggtttaatttttgtccctgaactctaaaacccaaccgttctggttcatggtttattgccactacttatcttccaacagttctgtctcctcttcaagccctcaacaaaatcaattatgtttttgatgaatgcatgaatgtttcttatggtgctaattgaatcacaatgatttgctaagaaccatttccccctaaaatcaattatgtctgagctttattttggttggtgcaaccaaaatcctatcagcaatcagatattttagttgctatgatttgaacttgaaatctcaatacagaataaaatacataccaatgtctgttttggttagttctgtgtcttatttatagaaaggtcgtgtataattcagcttgtagaaatttctttaactggaaataaaaaaatggttataatacactgagcctgatctgatgactattggtgataagtccctttttggcctattgcaggttgggccacttgctgcctattataaattaccacttaatcgcgtccttgtggttagtattgtaatatctaatctttatgagcgctaagttacatggcaatctgatttctctattgtgagttttaggcatttgatgacatggacctgccctgtggagttcttcgtttacaacctaaaggaggatatgggcgccataatgggtctgttgattttataatcatgtgttttaatgaagtaatttgttgaaattaatttgtcatttaaaagactgacctgataagcaactttctgacaacctcatcaggaagagacaacatattgttcccttctaatatttttacttaataaatttttctcgtttgtagtggcaatttctgcatgcacctttccattttccccatatggacatgttctttttttttcccttttacatagcctgagacagccatagttctcttgaaaggtctaccagatataatgacactcttattagtgttctcttattttactcatttattttactattagctatatgatcctattttctgtttgtaaataagttttttttttacattgacaaaatatttacctttctagcttatcagggtgaagagcttgatataccattttcgtaagaaccgagaatttggtcgattaaggattggtaggttcgacatctgtgttcatttccctcccttaatgtggataaatattcttatactttaacttattcaggaattggacggccacctggccaaatggaccccaaagcttttgtgctccagaagtttaataagaccggtcgagaacgggtaaatatctatatggctagtacttgttagcgtcatgcccttttctgagtttttgtacagtaaccattggatgatttactttcataattctcaccggatgatcgtgctcatttgctgggatatatccatatgaccaaaaccatggctatattctgcatggaagtgagccgcacctagatttattctacttcagttaaatctgaataaattttgttgtgctatacgcaaatgagagatgatttataggcttgcaacatgtctatgtttagaagattaccttctggtcaacttccatgtggtgtgccaagccaatcctgtgaagtttacagcccttgagatctcttaaatctcaaattgttttaggtaataatgtcaccatgtcctcaaaattgaactgctggggttcctgaaggtacttggaggacttgttatgacaatctctgtcactcattagcgtttttttccatggaatcattctggtacatcatatttctggaagcaccatatttgacataattatttcactgtcacagtttttattattctgtatgtagcgaccctgaagaattgtgctgtgacaggtagtcttacgctttgcatgttttgttttatcctagattgattcagccatagaagagggtgttgagattcttaagttggttgttaccaagggtttgacagaggctgcaagatcatcaaatgtggatcagaagtataagcatctgacaacacacgacatgcaactgtaaagatgatgacagacgctgcttgtccgagagcgatccactattacctgttgaatgcctgatgggagaacctggtaacatctaaactgcttgattcattgatttgccaaacttattacaagggctgtcagccgtctcctttgcattggatttgtaagttttgatgctctcaatcttttttttttatacttttgaacaactgattcaataaataaaaacttgacggttctgtcagcttcaagattctatctaccatgcgctttaaagataaagctgatcatttttctttaaaagaagatggatatccattttacgcccgtattcagacctattacttatacaaggtgctaaaactcttcagcttctaccccatggactgaatggacggagccgaagaaacagcaaaagtacacggaagaggatcctctaacttacttccctctgactttgagtcattgacatgtgtacccgataggtaaagagcccacatatcaatgacacaagttagaggaaaataagttagaggattttaatccaaagcacacaagagtaagtagtactttccgtaataccatacgttctctgaacaagctggtaatattaggaaaaccacatgagcactgagcacacatatacatgcgccaagcagccctagattattaactaattttatttgctcttcagtccaaactcagcgtcgaaaattgcaatttgatgaacagtgatgtattcaacgaaatgacacttactgtgaaaacagagatgaacacagatttttgtgctgcctcaacaagcgcatcttttctgatccatttgaactgaaatatagggagaattacacaagtcatggcaaacagtttgccacgcacgacaacaaaacaccccagcaaactgcaagcacaaacactttttttttcttttttcttttttgcgaggacacaaacacctaattatatgcgtgcacacaattattcaacactcacaaagaattaaagacgttgcatgatgacaagatcatctaggcatctcatgtttactataggaattcactgctggcacatggagtgtagtataatatctagattatggggataggcttgacgaacagctgcttgatgatattcatgctgagcttgttgaaggtgtaggcgtcttcgctgccttggtagaagaacattatgctcatcgctaagttggcgactcggttcacagccggcacaagcgaggaacgctcaaagcgtgcttgattgatagttttccatgcgtcttcgaccagattacttatcacagccgtggcttcctcaccagtgacattgtgctccttcatgtaggactcaacagaggtggccatatctagtttgcccttcccgtgctgtgaccaacaaacacttaattagttactccctccatttgaactgactaataatgtcaaataaaaaaaaacgaaggtactcagttcaaatggagtagtattttatagaggattatattatatcccatgcacatgtcaaaataacataaaagattttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0347800, RefSeq:Os03g0347800