Os05g0131000

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0131000| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001061087.1 GI:115461904 GeneID:4337710| Leng...")
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Gene Name

Os05g0131000

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001061087.1 GI:115461904 GeneID:4337710

Length

1784 bp

Definition

Oryza sativa Japonica Group Os05g0131000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1806313..1808096

Sequence Coding Region

1806492..1808075

Expression

GEO Profiles:Os05g0131000

Genome Context

<gbrowseImage1> name=NC_008398:1806313..1808096 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1806313..1808096 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagttcgacggcgccatagctcgccggcgagccatggcgcgccgcggcagcggcggcggcaacggtgacggcgacggcatcacggtgcacgtggagcagatggcgcgcgggctgatgcagaggcaggaggcggcggcgtcggacgagcagcaccggatcatggcgagcagccaccgggtgtcccgcgtcccggcgcacctccgcgacgccaacgccgacgcctacacgccgcggttcgtcgccgtcggcccgctccaccgcggcgacgcgcggcggctcggcgccggcgagcgcctcaagatggcgtacctccacagcctcatctcccgcggccactccgaccaggcgcggcagctcgccgtcatcgaggagtacatccgcgccgtcgcggcgagggagagggaggcgcgcgcgttctacagcgaggacgtcgacatgtacgccgaggagttcatcatgatgctggtgctcgacggctgcttcatcatcgagcacctcgtcaacgtcgccatcgggagggatgagccgtcgctgcacgccacgccgttcgcccccgtgcagctctccgtcgacctcatcctcgccgagaaccagatcccgttcttcgtcctcgtcgacctggtcaggatcaccgacctgccggagttcgcgagcaccggccacccgccgccggtgctgatcgtgaagctggttctctactacctcgccggcgagaagggccgcgacatggtgggcgacgcgctgccgcccgcggagggcgtgtcccacatcctccacctgctccacgcgatgatcgtcgcggcgcggaccaagtgggagccgccgccgcgcatccaggacggcgcggtgctcgggacggcgcaggacggagcgcggctgctgcggcggctcccgctgctgctgctggtgccgctgctgtaccccatcctgccggaggagagcaagtggcgggcgagctacgggcgggaggacgtgccgtcggcgagcgacctgaagcggatgtgggtgcggttcaagaagccgcgcggcggcggcgcggcggcggtgacaggcatcgcgtcggtgatggggccggtgccgctggcggtgaagctggcgcacgaggacaagctgcggctgccgcagctgcgggtggagctccggacggcgccgctgctgctgaacctgatggcgttcgagcagtcggcggcgaaggcggaggcgcgcgacgtgtcggcgtacgtgtcgttcatggcgaagatggtgcagtcggcggaggacgccggggcgctggcggcggcggaggtggtggcggtggtgcacgggaacggcggcggcgagggcaaggaggaggtggtgaggctgttccggcaggtcggggcggcgagcggcgaggtggagctggagcggagctacctgggagggatggtggtggagctccgggagaggagccggcacccgctgttcatgatgtgggcggacgtgaagcgcaactacttcacggtgccatgggcggtggtcgccgagttcgtcgccttcgtcaccttcgtctccaccattgtccagatgtactcctccttcaagcagaaaggaggatga</cdnaseq>

Protein Sequence

<aaseq>MEEFDGAIARRRAMARRGSGGGNGDGDGITVHVEQMARGLMQRQ EAAASDEQHRIMASSHRVSRVPAHLRDANADAYTPRFVAVGPLHRGDARRLGAGERLK MAYLHSLISRGHSDQARQLAVIEEYIRAVAAREREARAFYSEDVDMYAEEFIMMLVLD GCFIIEHLVNVAIGRDEPSLHATPFAPVQLSVDLILAENQIPFFVLVDLVRITDLPEF ASTGHPPPVLIVKLVLYYLAGEKGRDMVGDALPPAEGVSHILHLLHAMIVAARTKWEP PPRIQDGAVLGTAQDGARLLRRLPLLLLVPLLYPILPEESKWRASYGREDVPSASDLK RMWVRFKKPRGGGAAAVTGIASVMGPVPLAVKLAHEDKLRLPQLRVELRTAPLLLNLM AFEQSAAKAEARDVSAYVSFMAKMVQSAEDAGALAAAEVVAVVHGNGGGEGKEEVVRL FRQVGAASGEVELERSYLGGMVVELRERSRHPLFMMWADVKRNYFTVPWAVVAEFVAF VTFVSTIVQMYSSFKQKGG</aaseq>

Gene Sequence

<dnaseqindica>22..1605#attggtgctcactgatcagatatggaggagttcgacggcgccatagctcgccggcgagccatggcgcgccgcggcagcggcggcggcaacggtgacggcgacggcatcacggtgcacgtggagcagatggcgcgcgggctgatgcagaggcaggaggcggcggcgtcggacgagcagcaccggatcatggcgagcagccaccgggtgtcccgcgtcccggcgcacctccgcgacgccaacgccgacgcctacacgccgcggttcgtcgccgtcggcccgctccaccgcggcgacgcgcggcggctcggcgccggcgagcgcctcaagatggcgtacctccacagcctcatctcccgcggccactccgaccaggcgcggcagctcgccgtcatcgaggagtacatccgcgccgtcgcggcgagggagagggaggcgcgcgcgttctacagcgaggacgtcgacatgtacgccgaggagttcatcatgatgctggtgctcgacggctgcttcatcatcgagcacctcgtcaacgtcgccatcgggagggatgagccgtcgctgcacgccacgccgttcgcccccgtgcagctctccgtcgacctcatcctcgccgagaaccagatcccgttcttcgtcctcgtcgacctggtcaggatcaccgacctgccggagttcgcgagcaccggccacccgccgccggtgctgatcgtgaagctggttctctactacctcgccggcgagaagggccgcgacatggtgggcgacgcgctgccgcccgcggagggcgtgtcccacatcctccacctgctccacgcgatgatcgtcgcggcgcggaccaagtgggagccgccgccgcgcatccaggacggcgcggtgctcgggacggcgcaggacggagcgcggctgctgcggcggctcccgctgctgctgctggtgccgctgctgtaccccatcctgccggaggagagcaagtggcgggcgagctacgggcgggaggacgtgccgtcggcgagcgacctgaagcggatgtgggtgcggttcaagaagccgcgcggcggcggcgcggcggcggtgacaggcatcgcgtcggtgatggggccggtgccgctggcggtgaagctggcgcacgaggacaagctgcggctgccgcagctgcgggtggagctccggacggcgccgctgctgctgaacctgatggcgttcgagcagtcggcggcgaaggcggaggcgcgcgacgtgtcggcgtacgtgtcgttcatggcgaagatggtgcagtcggcggaggacgccggggcgctggcggcggcggaggtggtggcggtggtgcacgggaacggcggcggcgagggcaaggaggaggtggtgaggctgttccggcaggtcggggcggcgagcggcgaggtggagctggagcggagctacctgggagggatggtggtggagctccgggagaggagccggcacccgctgttcatgatgtgggcggacgtgaagcgcaactacttcacggtgccatgggcggtggtcgccgagttcgtcgccttcgtcaccttcgtctccaccattgtccagatgtactcctccttcaagcagaaaggaggatgatctcgtccagaccgaccgccatggaattaatccatcgatactcccaccgtcccataaaaaaccgaatctaggaccagatatgatatattctagtacgataaatctagatatatgtatgtactgatttgtagtactaggatgtatcacatctagttttttatgggacggatagagtacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0131000, RefSeq:Os05g0131000