Os05g0133100

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0133100| Description = Similar to PII protein (Fragment)| Version = NM_001061097.1 GI:115461924 GeneID:4337720| Length = 2967 bp| Definiti...")
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Gene Name

Os05g0133100

Description

Similar to PII protein (Fragment)

Version

NM_001061097.1 GI:115461924 GeneID:4337720

Length

2967 bp

Definition

Oryza sativa Japonica Group Os05g0133100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1902320..1905286

Sequence Coding Region

1902535..1902647,1903104..1903173,1903419..1903486,1904557..1904644,1904725..1904752
,1904849..1904894,1905014..1905239

Expression

GEO Profiles:Os05g0133100

Genome Context

<gbrowseImage1> name=NC_008398:1902320..1905286 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:1902320..1905286 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgccggcgaccgccgccgccgccgccgcgtcctgtggcgtcctccgccaccaccatcctccggcttccccgcggcctcctcccaccaccaccaccaccacctcccgcctcctcctcgcctcgcgctcgcggggcctccagcggccactccgagtcaaccacgcgccccctcgtcgcctcccgcccacggccgcgcgcgcccagagtgccgccgcagcagggtaccagccggagtcggagttctacaaggtggaggcaatcctgaggccatggagggtgccttatgtgtcatcgggtttgctgcaaatggggatcagaggcgtgacggtgtccgacgtgcggggtttcggcgcacagggcgggtcaactgagaggcatgaagggtcagaatttgcagaagatacatttattgataaagttaagatggaaatagtggtgtccaaggatcaggttgaagctgttgttgacaagataattgaaaaggcaagaacaggagaaattggtgatggaaaaatatttttgatacccgtgtcggacgtgatcagaatacgcaccggcgaacgaggggagcgagcggagaggatggccggagggctggcggacaagctgtcctcagcaatgccgatctcatga</cdnaseq>

Protein Sequence

<aaseq>MSSPATAAAAAASCGVLRHHHPPASPRPPPTTTTTTSRLLLASR SRGLQRPLRVNHAPPRRLPPTAARAQSAAAAGYQPESEFYKVEAILRPWRVPYVSSGL LQMGIRGVTVSDVRGFGAQGGSTERHEGSEFAEDTFIDKVKMEIVVSKDQVEAVVDKI IEKARTGEIGDGKIFLIPVSDVIRIRTGERGERAERMAGGLADKLSSAMPIS</aaseq>

Gene Sequence

<dnaseqindica>2640..2752#2114..2183#1801..1868#643..730#535..562#393..438#48..273#actagtcttcacgctccacatcctcctccatcgccgacggttcaatcatgtcgtcgccggcgaccgccgccgccgccgccgcgtcctgtggcgtcctccgccaccaccatcctccggcttccccgcggcctcctcccaccaccaccaccaccacctcccgcctcctcctcgcctcgcgctcgcggggcctccagcggccactccgagtcaaccacgcgccccctcgtcgcctcccgcccacggccgcgcgcgcccagagtgccgccgcagcaggtgaggatccctcttcgcctcgccatgatccccgaaatcgatcgagatcggtttgttggattggttatcgctgattgggtcatcgtcgtcgtcgtcgtcgttgtctgttcatttttcagggtaccagccggagtcggagttctacaaggtggaggcaatcctgaggtgaaattcgtttgtgaccgattagtatcgtgatccgtgttgattgtgattacattttttggttgctgatgaaatgtgccgggttgattcttgcaggccatggagggtgccttatgtgtcatcggtgagtatagtgtgtgttactgctgtaaatcgtgttcttcctgcactcgagctgttaggttggtcaattggggtttgcagggtttgctgcaaatggggatcagaggcgtgacggtgtccgacgtgcggggtttcggcgcacagggcgggtcaactgagaggcatgaaggtatacatgctggctctgctcatggttttatcattgcctattttttttagtgttggtggttgtttgtagtgtgtagaaatttcatcctgttgattgtgagcctagatttgtagttacggatacgtttcgtagggctagcaatgcgatagaatggatatacctgaatctgctcaccggtttccactgaataaactgatcaaaaattgttgatgcgatgtgttccattttgtatattgtactttgatttctaccgtagtttggaataggatattgctatgtctgtgcaatgacagacgacttctgtccagaatggggattgctcaactcataaaattcctcgcatggtttgtaccattgtatgcttccagttaaaaagataaggttcgcctgttggagcctagatgaactgagagcaccctgctagcccttacgattggtaaagttgtgctcttgtctcaaagaggcattctagcagcagcatcttgtgttgtactctgttacaacacctaggtattatcgagcttgccagaaatcttgaaggtctccacgtgcagagtgcagtaaagtagcaaactaaagggctgctgatgtatccaagaagttgatagcacaggcagactgcacttaaaatgatgcctgttctaatcataccttccatagtctcgctcctgagagcttcaaagacgggttacagccaaagatgcacacaatatcctcattatcttcaatatgctttaaatgccactggtgcaaggagcaactgggcactggcataaactatctgtgcacatacttgaatcaactactatcactatttttatccaaatagtttgctgcggttatatgattggaaaagaagcatggatttgggaaatgttaggaataagaagattactgtgataagggagggtagtttaagcatttgtatcaatagcaacattggcatgttaattatggttcaaagaagttttggtctctgcacaactgagcatgcatgtatgcttgtattattgtgtgaaggctagattaatctgtactgatggtgctcctttttttttgttgtcgtgcagggtcagaatttgcagaagatacatttattgataaagttaagatggaaatagtggtgtccaaggatcaggtgatttcttcattactattttgtaatgttgaaatttgaaaaaacatatacctaaactttcccagtattcatccgagatcattgactatgtgggtacgatcactactactacatttctaaacatgttttgctgtccctccgtgatattattactgcctgttctgcatgtttttgtgacaatttaaaaacaacagcttaaacagcctattcttctttctttctttttcccttttggcattctctaggttgaagctgttgttgacaagataattgaaaaggcaagaacaggagaaattggtgatggaaaaatattttgtaagtgcatgctgtttctgatgaccttttattgctctgttgttacgttcagatcatttcccagtttcccactgttcacctttgtatcaaagtgagcttctattgccctgagcaggcatctatcgagttctgttgtttctcttcatgtgctctatgtattttatctctgacataaagaaaatatatgtaacttaaaaatattgagtatcaattgcactagagcatagagtaatctaatcaggctttcaccataccattctggaaaaaaaattatttaaaattgatttttcaacagaggcagctactataacgaatttatcgacatgccaacataaacgccctttcaatcctaaaggcactaatgttccgtgcaaccaaacgtcgcattcttttgcatatatcatgtaatgtttctctgctattacgcctgacttgtatggtgttacattttctcagtgatacccgtgtcggacgtgatcagaatacgcaccggcgaacgaggggagcgagcggagaggatggccggagggctggcggacaagctgtcctcagcaatgccgatctcatgagagagcatgtttcctgtaggtaccactactgcactcccctgttgattagtgatgatgatgatcatgcctgtgtgaactccagcagcaataataaagctggaacgtaatgcccctccagtccagggctccaggcatcttacactgaaaatgttgttgccagaaacaaactcatgaactggatttcattatgaacaaagatgggggaaattcatgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0133100, RefSeq:Os05g0133100