Os03g0405000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os03g0405000 |
|---|---|
| Description |
Reticulon family protein |
| Version |
NM_001056862.1 GI:115453452 GeneID:4333071 |
| Length |
5682 bp |
| Definition |
Oryza sativa Japonica Group Os03g0405000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:17207952..17213633 |
| Sequence Coding Region |
17208019..17208268,17209422..17209511,17209855..17209988,17210080..17210250,17210446..17210568 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:17207952..17213633 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:17207952..17213633 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggcggcggcgggaggcggcgacgggagatggtgcgtggtgacgggcggccgcggcttcgcggcgaggcacctggtggcgatgctgctacgctccggcgagtggctggtgcgcgtggccgacctgccccccgccatcgcgctcgaccgcgacgaggaggaggggatcctaggcgccgccctgcgggagggccgggctgcctacgcctccgcggacctccgcaacaaggcccaggtggccgcagcttttgagggggctgatgttgttttccacatggctgcaccagattcgtctatcaacaactttcaccttcattattcagttaatgttgagggaacaaagaatgtcattgacgcttgcatccgttgcaaggtgaagagacttatctacaccagttcaccaagtgtagttttcgatggaattcatggaatctttgatgcagatgaatcaatgccttacccagacaagtttaatgattcatattcagaaacaaaggcagatgcagaaaagttggtcatgaaggctaatggtagggatgggcttcttacttgttgtatacgcccaagtagcatttttggccctggtgataagctactggttccttctctggttactgctgcaagggcaggaaagtctaagtacattattggtgatgggagcaactactatgatttcacctatgtggagaatgtggcatatggccatgtttgtgcagagaaaactctatcatctgaagatggtgcaaagagagctgctggaaaaacctatttcataacaaatatggaggctataaaattctgggagttcatgtcgttgattttggaaggactcggatatgaaaggccttcaataaaaataccagtttctgttatgatgccagtggctcatatggtagaatggacttataagacgttcgctcgctatggaatgaaaattcctcagcttactccttcaaggatccggctcctgtcttgcaatagaacattcagctgctcaagagcaaaagatcagcttggttatgaacccattgtgtcactcaaggatggacttaagagaacaatagagtcatatccccatctgcaagcacaaaatcaaaggagcatatcaaaagcctcaattttccttggcaatggaaatcttgcgaagacagttctctgggaagacatgaagcaaacaatgactgtactactgctactggctgttatctactatcatttatttacatgtggttacaccttcattacagcaatggcaaagcttttctcactaaccgcactgtttttattcattcatgggattctgcctgcaaatgtgtttggacacaaggttgagaagctcgagccttcaaattttcacatcacacaggtggaggcgcatcatattgctcattcagtcagctcaacatggaactctttagttggtgtgctaaaatctttatgcagaggaaatgattggccactatttttcaaggtggtattctccctattggttgtgagcatccttagttccatgtcttcgcaatctgcatttaaaataggtatttctatggctttcctaggcttcaaagcctatgagaaatgggaggacaccatcgatgatttggtgggtaatgcatgctcggttgttacgcactttgttcagggccagaaatcctcaaggcagaagcatgcagataattga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAAGGGDGRWCVVTGGRGFAARHLVAMLLRSGEWLVRVADL PPAIALDRDEEEGILGAALREGRAAYASADLRNKAQVAAAFEGADVVFHMAAPDSSIN NFHLHYSVNVEGTKNVIDACIRCKVKRLIYTSSPSVVFDGIHGIFDADESMPYPDKFN DSYSETKADAEKLVMKANGRDGLLTCCIRPSSIFGPGDKLLVPSLVTAARAGKSKYII GDGSNYYDFTYVENVAYGHVCAEKTLSSEDGAKRAAGKTYFITNMEAIKFWEFMSLIL EGLGYERPSIKIPVSVMMPVAHMVEWTYKTFARYGMKIPQLTPSRIRLLSCNRTFSCS RAKDQLGYEPIVSLKDGLKRTIESYPHLQAQNQRSISKASIFLGNGNLAKTVLWEDMK QTMTVLLLLAVIYYHLFTCGYTFITAMAKLFSLTALFLFIHGILPANVFGHKVEKLEP SNFHITQVEAHHIAHSVSSTWNSLVGVLKSLCRGNDWPLFFKVVFSLLVVSILSSMSS QSAFKIGISMAFLGFKAYEKWEDTIDDLVGNACSVVTHFVQGQKSSRQKHADN</aaseq> |
| Gene Sequence |
<dnaseqindica>68..317#1471..1560#1904..2037#2129..2299#2495..2617#2693..2772#4088..4286#4448..4544#4633..4807#4929..5083#5198..5266#5360..5502#agccgccggcggactcagccgataaactgtgtgtgcctcgaatttaacgacgacggcgagcggcgagatggcggcggcggcggcgggaggcggcgacgggagatggtgcgtggtgacgggcggccgcggcttcgcggcgaggcacctggtggcgatgctgctacgctccggcgagtggctggtgcgcgtggccgacctgccccccgccatcgcgctcgaccgcgacgaggaggaggggatcctaggcgccgccctgcgggagggccgggctgcctacgcctccgcggacctccgcaacaaggcccaggtggccgcaggtgcgtgtcatctccccgttttcgcttcccccagatcgctgcgcgggtaggtttttggttgtggttggtgatgtgtttgattcgtacttactggggtaaaaggtcagagtacggcgtgtcacacgagcgtatcggctagacatggccagcgtgatttagttggcaatccagatcgagcccgaattcattttgtcgaaatatccattcagttcgatgtgttggtatgctgggactgatcctagtttcatcatacctatattgaaagtacatgatgttagtgtcattgttgccaatgcactctattagcttgacattgtatttgttgcaatggcacactgactggaactaattaaatagttgttccaatgagggtctctcctgatatggattcaagaagtggtggtaccagaccagcaattaaggtctgtttgcattgcgatggattatgataatctcgtttggtgcaatagcttttagacagtttggtgtttggcaaacaataatactgtcatgttccaaaaatgtgaaataattgggagagacatgagttagataacatgttttctataaccttaatttgatctgtataatgaagtataaacatttcaagttttaatttttgtagcaacttagaacataagtacaacgcagcacagcacagcgtagcaagcacaaactgagcctaattatggagtttctgctgcctacttaatgtttcttactgtgtaactagaactgcgattgtcctagaggggcttggtcagctgacatttattcatttccttgaaatggctagggaaaaaaagtctcatattatgctgcatatctgaggggggggggagataatatgtattggggactcctgtaacttgtctgttgatttactttcacacatcttctgttacttacaattttatagttatctagtttgttaatttcctgcggtctttccactaggttctgtcatcctgatacttgtgttttttaagttactacctctggccactaaaggaaaattgatgttttgtgtattgacataacctccaaaacacacattgactcactactttattctttagagccgaataaaatagtgtgacattactcaatttcattgtttgatgtccaatgcatatatattcttaatgtgcagcttttgagggggctgatgttgttttccacatggctgcaccagattcgtctatcaacaactttcaccttcattattcagttaatgttgagggttggtacttctaacttgtatgccatgcagctttggttcttaattatcattgtacagattgttgtttatgagatatcgatccagttatttttattttcaataaatatctataacatggaggatttgccactcatgtgacactgacatgtgggaccaggatacacatgtcagtgagacatggtgtggtaaatcattttctaatcattaataatcattttcaataaatatcaatttttttcaatattagtaacattaattttggattattttttctaatcattttcaatgatatagtactgcattaaagtttgtctatgtgagacttgtacaatgcatttcacaggaacaaagaatgtcattgacgcttgcatccgttgcaaggtgaagagacttatctacaccagttcaccaagtgtagttttcgatggaattcatggaatctttgatgcagatgaatcaatgccttacccagacaaggtcttcctatttttcatggattacattcttgtgatttgtcattgcttcatctttatcccatatttcctaacaagagcttttcttacttcagtttaatgattcatattcagaaacaaaggcagatgcagaaaagttggtcatgaaggctaatggtagggatgggcttcttacttgttgtatacgcccaagtagcatttttggccctggtgataagctactggttccttctctggttactgctgcaagggcaggaaagtctaaggtaagaatggcttgcatgtctgtaaacattggtatgctaggtttgatttcatttctcgttgtccatgttcacatgttgatatggactatttcaatattgtaggatcagaatgctatttataagtagcaaaaataatattgaacaaactaacacttgaattacttttttatgcttgttccaaaatttcatcgctagtacattattggtgatgggagcaactactatgatttcacctatgtggagaatgtggcatatggccatgtttgtgcagagaaaactctatcatctgaagatggtgcaaagagagctgctggaaaagtatggtcccttctttgcatttcactttttaacaaccaggagtccataatattattgttttttatttgtttctagacctatttcataacaaatatggaggctataaaattctgggagttcatgtcgttgattttggaaggactcggatatgaaaggtattgatttgaaaatacaaatggtcttctacatgcttagatttattttctgaggaacatcattgatagtgtctcagtatgctgtaccataattaggccctgtttgatttagcttaagattattataatccagattattagcagtaatatgaaacaaacagatagattattataatctagaacccagattactataatctgataatctcctccaaaggtgctttttttcagataaaaggaaatagtgcattgtggacattcactgaattatgctttgtagttttagaggttatgtcaaaactttcagttttctacaacttcatcaaggtatgacaatagaacatgacagcttctttactactcgggcagtttggcaggctgtgtccccctttaatacactaatgcagtgttcacctttacaccattaaagggggtgttttgatggtctgagtttgtgtcacgtgctagaattatttgggatgaaacgggatgaaggggaataaactggatcataatagaggaaataacaaggaatggccctgaacctaaacagcgcgatgctctctgtcgcactgagaaggcagggccgatgggcactaagataaatcttgatctaatgcctatcctgatccaggctaggtccctccttatatagatggagaggaattcctaatctaatccctatcctaacagactctatccaactgagctacaactgagctcctcaatcctatccaactaaactacgtacttaccgcaaggggttccaattgggcctaggagttccggcccaatgcccattacagtttggcaccatgctcgtgaaggatggacctgtcttatggagttgcagtgttctgataaatcattcactaacattgtatttttctcgaactcctagtatagtatcagcaagctggtatttttgatggaaataattgcacttttttgaaaaataattattatataagtttgatagcctactgagatgatttctgttggttatgtcattagttttctggagagcattttaactgtgtaccaaaatattaatatcttaagggatgaggagcggaatcattacagttcatttaattgataatttagcttagctggatctcctgattacatgtgctactgatatcaaaccgagtgttacagctctcagtagtatctgctggagtagatttggtcttctgctattgtatctatgtccctgcaggatgagtttgaggatggacagtgaaggatacatcttatacatatatgagtttatcaattaccattgtactaatgcattagaactttgtggcaggccttcaataaaaataccagtttctgttatgatgccagtggctcatatggtagaatggacttataagacgttcgctcgctatggaatgaaaattcctcagcttactccttcaaggatccggctcctgtcttgcaatagaacattcagctgctcaagagcaaaagatcagcttggttatgaacccattgtgtcactcaaggtgtttatctgtgattcataatgtgattagtaatagctcttgatatatttgtgtgtgtggtactgtggtggtttatacctactcaataactctagatagtccatacctacttcccttcttgaaggttctcacacatgcaactgaccaattctaaaattcaggatggacttaagagaacaatagagtcatatccccatctgcaagcacaaaatcaaaggagcatatcaaaagcctcaattttccttggcaatggaaatcgtatgaatatctctcacacacacatgcatgcatgcccatgccttcacacccttcttgagattataatgaatattgatcttggctgcagttgcgaagacagttctctgggaagacatgaagcaaacaatgactgtactactgctactggctgttatctactatcatttatttacatgtggttacaccttcattacagcaatggcaaagcttttctcactaaccgcactgtttttattcattcatgggattctgcctgcaaatgtgtatggtcctctgtcattttccctttaactgaatatgcctattatcagctggtgaaacaccatctaggcttttatccatcttctgtttccagatagtgattgttgaataatacttatgcaggtttggacacaaggttgagaagctcgagccttcaaattttcacatcacacaggtggaggcgcatcatattgctcattcagtcagctcaacatggaactctttagttggtgtgctaaaatctttatgcagaggaaatgattggccactatttttcaaggcatggcacctatgtgatatgtctacatgactaaattagttttataattataaatttctgaggacaaaagtgatgtatttttgtgtccagtctctaactgcttgttcttgccaggtggtattctccctattggttgtgagcatccttagttccatgtcttcgcaatctgcatttaaaataggtaattttaaataccatgcttctctttttgaatcctgcaaaacaaggagcatgagcacatgactgatgatgaactatctgatggggagaataggtatttctatggctttcctaggcttcaaagcctatgagaaatgggaggacaccatcgatgatttggtgggtaatgcatgctcggttgttacgcactttgttcagggccagaaatcctcaaggcagaagcatgcagataattgaatggcatcatttagtgaggttaacttcaatttcagccattgctagtttttcttccgagaacttcagccaatgttcctataatgttgtaaattagtttagaggttcagatttggacatttccttacagtggttgatgcgcttgtagggaattgaactattttttcaaagagatatttttgc</dnaseqindica> 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