Os03g0406100

From RiceWiki
Revision as of 19:36, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0406100

Description

SPX, N-terminal domain containing protein

Version

NM_001056867.1 GI:115453462 GeneID:4333078

Length

833 bp

Definition

Oryza sativa Japonica Group Os03g0406100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17281276..17282108

Sequence Coding Region

17281276..17281494,17281584..17282108

Expression

GEO Profiles:Os03g0406100

Genome Context

<gbrowseImage1> name=NC_008396:17281276..17282108 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17281276..17282108 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagttcgggaagcggctgaagaggcagatcgaggagagcctgccggagtggcgcgaccatttcctcaactacaaggagctcaagcgccgcctcaacgccgtctcctcccccgaccccgccgccgaggcccgcttcctcgccctcctccacgccgaggtcgacaagttcaacgccttcttcctcgagcaggaggaggacttcgtcatcaggcagcgggagctgcaggagaggatccagtcgtcgtcgtcggcggcggcggagatggaggggcgggtgcggagggaggtggtggacctgcacggggagatggtgctgctgctcaactacagcagcatcaactacacggggctcgccaagatcctcaagaagtacgacaagcgcaccggcggcgtgctccgcctccccgtcatcgccggcgtcctccgccagcccttctacgccaccgacctcctctccagcctcgtcagggactgcgaggccatcatggacgccgtcttcccctccctcccctccccctccgccgccgccgccgccgccgcccgcgccgccgccgagcaggccatcttccgcaacaccgtcgccgccctgctcaccatgcaggaggtccgcagcggcagctccacctacggccacttctccctcccgccgatgaccccgctgcccgactccgactggctcatccagtccgtccagccgccgccgccgccgccgccgtcgtcgccgctcatcatccccacgtag</cdnaseq>

Protein Sequence

<aaseq>MKFGKRLKRQIEESLPEWRDHFLNYKELKRRLNAVSSPDPAAEA RFLALLHAEVDKFNAFFLEQEEDFVIRQRELQERIQSSSSAAAEMEGRVRREVVDLHG EMVLLLNYSSINYTGLAKILKKYDKRTGGVLRLPVIAGVLRQPFYATDLLSSLVRDCE AIMDAVFPSLPSPSAAAAAAARAAAEQAIFRNTVAALLTMQEVRSGSSTYGHFSLPPM TPLPDSDWLIQSVQPPPPPPPSSPLIIPT</aaseq>

Gene Sequence

<dnaseqindica>1..219#309..833#atgaagttcgggaagcggctgaagaggcagatcgaggagagcctgccggagtggcgcgaccatttcctcaactacaaggagctcaagcgccgcctcaacgccgtctcctcccccgaccccgccgccgaggcccgcttcctcgccctcctccacgccgaggtcgacaagttcaacgccttcttcctcgagcaggaggaggacttcgtcatcaggcagcgggtacacaataaatacttcaattaatttgctcctccctcctcgcgtcgatcggtcggccatggaaatgagtgatatgtgtatgggtgcaggagctgcaggagaggatccagtcgtcgtcgtcggcggcggcggagatggaggggcgggtgcggagggaggtggtggacctgcacggggagatggtgctgctgctcaactacagcagcatcaactacacggggctcgccaagatcctcaagaagtacgacaagcgcaccggcggcgtgctccgcctccccgtcatcgccggcgtcctccgccagcccttctacgccaccgacctcctctccagcctcgtcagggactgcgaggccatcatggacgccgtcttcccctccctcccctccccctccgccgccgccgccgccgccgcccgcgccgccgccgagcaggccatcttccgcaacaccgtcgccgccctgctcaccatgcaggaggtccgcagcggcagctccacctacggccacttctccctcccgccgatgaccccgctgcccgactccgactggctcatccagtccgtccagccgccgccgccgccgccgccgtcgtcgccgctcatcatccccacgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0406100, RefSeq:Os03g0406100