Os05g0135000

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0135000| Description = Haem peroxidase family protein| Version = NM_001061105.1 GI:115461940 GeneID:4337728| Length = 1614 bp| Definition ...")
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Gene Name

Os05g0135000

Description

Haem peroxidase family protein

Version

NM_001061105.1 GI:115461940 GeneID:4337728

Length

1614 bp

Definition

Oryza sativa Japonica Group Os05g0135000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2028538..2030151

Sequence Coding Region

2028623..2028871,2029211..2029969

Expression

GEO Profiles:Os05g0135000

Genome Context

<gbrowseImage1> name=NC_008398:2028538..2030151 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2028538..2030151 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcgacagcagcatgcagaaggcctgcagtgatgctcatggcgttcgccatggcggctgcggtgacgatgagctccgtgccgccggcgtcggggacgacgacgctgcagtacgacttctactcgtcgtcgtgcccgaaagccgaggagacggtgaggaacgtcgtcgagccgatgatcttcaacgaccccaccatgggcgccgccttcatccgcctcttcttccacgactgcttcgtcaggggttgtgacgcgtccatcctgctggacccgacgagcagaaacacgcagccggagaagacggcgatcccgctgcgcggctacgacgccgtgaacaagatcaaggccgccgtcgaggccgtctgccccggcaaggtctcctgcgccgacatcctcgccttcgccgcgcgcgactccgccgtcgtcaacggcaacttcgccttcgccatgccctccggccgccgcgacggcaccgcctcctccgcctccgacgtcgcccggttcatcccgtccccggcgttccacctccaggacctcgtcgacagcttcgccgccaagggcctcaccgccgacgacctcgtcatcctctccggcgcccactccttcggcctcacccactgcgccttcgtcaccggcaggctctaccccaccgtcgaccccaccatgaacgccacgttcgccgcggcgctcaagaagctgtgcccgccgccggcgagcggcggcggcgggagggcggtgagcaacaaccaggtgaccgaccccaacgtgctgagcaaccagtacttcaagaacgtggccgccggggaggtgatgttcacgtcggaccagacgctgacgagccgcgacgacaccaaggcgatggtcgacgacaacgccgccaacccggtggcgtggatggcgaggttcgcggcggcgatggtgaagatgggcggcgtcgaggtgctcaccgggaacgccggcgaggtcaggaaggtctgcttcgccaccaacacggcgagctga</cdnaseq>

Protein Sequence

<aaseq>MAMATAACRRPAVMLMAFAMAAAVTMSSVPPASGTTTLQYDFYS SSCPKAEETVRNVVEPMIFNDPTMGAAFIRLFFHDCFVRGCDASILLDPTSRNTQPEK TAIPLRGYDAVNKIKAAVEAVCPGKVSCADILAFAARDSAVVNGNFAFAMPSGRRDGT ASSASDVARFIPSPAFHLQDLVDSFAAKGLTADDLVILSGAHSFGLTHCAFVTGRLYP TVDPTMNATFAAALKKLCPPPASGGGGRAVSNNQVTDPNVLSNQYFKNVAAGEVMFTS DQTLTSRDDTKAMVDDNAANPVAWMARFAAAMVKMGGVEVLTGNAGEVRKVCFATNTA S</aaseq>

Gene Sequence

<dnaseqindica>86..334#674..1432#acacacaccacagtcgcaatcagacattctctcttgttggttaactaaatagcttaattaatttgaggagtttagtctctgaaacatggcgatggcgacagcagcatgcagaaggcctgcagtgatgctcatggcgttcgccatggcggctgcggtgacgatgagctccgtgccgccggcgtcggggacgacgacgctgcagtacgacttctactcgtcgtcgtgcccgaaagccgaggagacggtgaggaacgtcgtcgagccgatgatcttcaacgaccccaccatgggcgccgccttcatccgcctcttcttccacgactgcttcgtcagggtacgtacaaaactatcatttataaaacatataagtttcgtagtaaattcatcaacgtgtcatatttggattggtttaattcaatttaataataacaatttacattcatgtttacccaacactatttctttaactatgttttaacaataaaattcattccagtctttattttaaagaaagtacatccaattattacacatatattacaaatcaaatgactcgaattataaaatcatagctcgattaaaatcaagaaaaccacttaaactacctgtttgaagacaaaggttaactatctaattaaaaaagtaattaatgaaattgtatttgcaataatagggttgtgacgcgtccatcctgctggacccgacgagcagaaacacgcagccggagaagacggcgatcccgctgcgcggctacgacgccgtgaacaagatcaaggccgccgtcgaggccgtctgccccggcaaggtctcctgcgccgacatcctcgccttcgccgcgcgcgactccgccgtcgtcaacggcaacttcgccttcgccatgccctccggccgccgcgacggcaccgcctcctccgcctccgacgtcgcccggttcatcccgtccccggcgttccacctccaggacctcgtcgacagcttcgccgccaagggcctcaccgccgacgacctcgtcatcctctccggcgcccactccttcggcctcacccactgcgccttcgtcaccggcaggctctaccccaccgtcgaccccaccatgaacgccacgttcgccgcggcgctcaagaagctgtgcccgccgccggcgagcggcggcggcgggagggcggtgagcaacaaccaggtgaccgaccccaacgtgctgagcaaccagtacttcaagaacgtggccgccggggaggtgatgttcacgtcggaccagacgctgacgagccgcgacgacaccaaggcgatggtcgacgacaacgccgccaacccggtggcgtggatggcgaggttcgcggcggcgatggtgaagatgggcggcgtcgaggtgctcaccgggaacgccggcgaggtcaggaaggtctgcttcgccaccaacacggcgagctgataattaagctacaagttctctttctccagcgatcggctggatcattaccacataatatatatattccttgttattttgatctcttaatttgtactccgtagttacctgcatcgattcttgctgttgtaaaactgaattgtaattcactatctttgaatattcagtgatcagttacagtggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0135000, RefSeq:Os05g0135000