Os05g0135400

From RiceWiki
Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0135400| Description = Haem peroxidase family protein| Version = NM_001061108.1 GI:115461946 GeneID:4337731| Length = 1690 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0135400

Description

Haem peroxidase family protein

Version

NM_001061108.1 GI:115461946 GeneID:4337731

Length

1690 bp

Definition

Oryza sativa Japonica Group Os05g0135400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2051657..2053346

Sequence Coding Region

2051797..2052015,2052364..2052392,2052909..2053155

Expression

GEO Profiles:Os05g0135400

Genome Context

<gbrowseImage1> name=NC_008398:2051657..2053346 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2051657..2053346 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaggtcgccgtggatggtgtttgcatgggcggcggcgatggtggccgtggcggcggcgtcgccggtgccgacgaagctgaaggtggggttctacgagcacagttgcccgcaggcggaggagatcgtccgcaacgccgtccgccgcgccgtcgcccgtgaccccggcctcgccgccggcctcatccgcatgcatttccacgactgcttcgtcagagggtgtgacgggtcgatactgataaactcgacgccggcgagctttgacaaccagtactacaagaacgtgctcaagcacagggtggtgctcaactccgaccaggcgctgctcgacagcccgtggaccgccggcgtcgtcaagctccactccgccgtcgagaaggtgttccaggtcaagttcgccgccgccatggtgaagatgggcaacatcgacgtgctcacgggtgacgagggagagatcagagagaagtgcttcatggtcaacaaccactactag</cdnaseq>

Protein Sequence

<aaseq>MMRSPWMVFAWAAAMVAVAAASPVPTKLKVGFYEHSCPQAEEIV RNAVRRAVARDPGLAAGLIRMHFHDCFVRGCDGSILINSTPASFDNQYYKNVLKHRVV LNSDQALLDSPWTAGVVKLHSAVEKVFQVKFAAAMVKMGNIDVLTGDEGEIREKCFMV NNHY</aaseq>

Gene Sequence

<dnaseqindica>141..359#708..736#1253..1499#atctcaaaatcaatctaaatccatccatcgatctctcaattaattaacctcaagagagaagtaattaattgagctagctagctagatagtgagataaatagtgatcaatagctaagctagctagcttcgatcgattgatcatgatgaggtcgccgtggatggtgtttgcatgggcggcggcgatggtggccgtggcggcggcgtcgccggtgccgacgaagctgaaggtggggttctacgagcacagttgcccgcaggcggaggagatcgtccgcaacgccgtccgccgcgccgtcgcccgtgaccccggcctcgccgccggcctcatccgcatgcatttccacgactgcttcgtcagagtaagtacacatatatcacgtgccattcttgaagaagctgtcaatggcgtgtaattaattaaggcctctaattagtcatgattagatgatactttctctgttttagtcaaactaatttatagaaaaatagaacaacatctacagcaccaaattagtttcactatatatgtaacgttgaatacatttttgataatatcattgtgtcgtgttgaaagttttattatatttttctgtaaatttgattaaattaaaaattaatttttgactatggaaaaaattaaaaacgactcatattataaagagggacgaaattaaactaattgtgctgaatttaattgattatttcaggggtgtgacgggtcgatactgataaactcgacgccgggacacgtggcggagaaggattcggtggcgaacaaccctagcatgcgagggttcgaggtggtggacgacgccaaggccatcgtcgaggcgcactgcccgcgcaccgtctcctgcgccgacatcctcgccttcgccgcccgcgactccgcccacctcgccggcgccaccgtcgactacccggtcccctccggccgccgcgacggccgcgtctccgtctccgacgaggtgctcgccgacaacgtccccgccccgaccttcagcctcgcccagctcgtcgccagcttcgagcgcaagggcctcaccgccgacgacatggtcaccctctccggcgcccacaccatcggccgctcccactgctcctccttcaccgcccgcctctacaacttcagcggcgaggccggcaggacggacccggccatcgacccggcgtacgcggcggagctcaagcgccggtgcccgccagcgaccgacgaccagatggaccccaccaccgtgccgctcgacccggtgacgccggcgagctttgacaaccagtactacaagaacgtgctcaagcacagggtggtgctcaactccgaccaggcgctgctcgacagcccgtggaccgccggcgtcgtcaagctccactccgccgtcgagaaggtgttccaggtcaagttcgccgccgccatggtgaagatgggcaacatcgacgtgctcacgggtgacgagggagagatcagagagaagtgcttcatggtcaacaaccactactagttgtcaatcaataattaagcttatattatagtatatatataatttcatctgcagctggtttatacatgtagaattagtaatattacacgcccaaatttcatcatgtggaaatttttttgttgttgttttgtgtggcaaattgtgattaagaaaagattctattgttaactcaaacaagagaagattttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0135400, RefSeq:Os05g0135400