Os05g0135500

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0135500| Description = Haem peroxidase family protein| Version = NM_001061109.1 GI:115461948 GeneID:4337732| Length = 2151 bp| Definition ...")
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Gene Name

Os05g0135500

Description

Haem peroxidase family protein

Version

NM_001061109.1 GI:115461948 GeneID:4337732

Length

2151 bp

Definition

Oryza sativa Japonica Group Os05g0135500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2058641..2060791

Sequence Coding Region

2058729..2058986,2059158..2059482,2060055..2060506

Expression

GEO Profiles:Os05g0135500

Genome Context

<gbrowseImage1> name=NC_008398:2058641..2060791 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2058641..2060791 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagtctcgtcgccggcgccgtcgtctctgcatgtgccgatggccgctgcggcactattagggatgctgatgatgatgtcgtcggcgccggagatgaaggtggaggcggccggcgggttgtccgtcgggttctacgccgaatcgtgccccaaggcggaggcgatcgtccgggacacggtgaccaaggcgttcgagaaggcgcccggcacgccggccgacctcatccgcctcttcttccacgactgcttcgtccgcggatgtgacgcatcggtgttgctggagtcgacaccagggaacaaggcggagagggacaacaaggcgaacaaccctagcttggatgggtttgacgtcgtcgatgatgccaaggacctcctcgagaaggagtgtccacacaccgtctcttgcgccgacatcctctctctcgtggctcgtgatagcgcctaccttgctggtgggctcgacttcgagatcccaacaggtcgtcgtgatggcttcgtctctaaggaggatgaggtcctctccaacgtccctcacccggagttcggtgccaaagacctcctcaaaaacttcaccgctaaaggttttacggcggaggagatggtgacgctgtcgggggcgcactctatcggcacgtctcactgctcatcgttcacaaaccggctgtacaagtactacggcacgtacggcacggacccgtcgatgccggcggcgtacgcggcggacatgaagagcaagtgcccgccggagacggcggcgcagcaggacgcgacgatggtgcagctcgacgacgtgacgccgttcaagatggacaaccagtactacaggaacgtgctcgccgggaacgtcacgttcgcctccgacgtggccctcctcgacacgccggagacggcggcgctcgtcaggctctacgccgccggcgaccccgcagcctggctcgcccgcttcgccgccgcgctggtcaaggtcagcaagctcgacgtgctcaccggcggcgagggggagatcaggctcaactgctccaggatcaactaa</cdnaseq>

Protein Sequence

<aaseq>MAVSSPAPSSLHVPMAAAALLGMLMMMSSAPEMKVEAAGGLSVG FYAESCPKAEAIVRDTVTKAFEKAPGTPADLIRLFFHDCFVRGCDASVLLESTPGNKA ERDNKANNPSLDGFDVVDDAKDLLEKECPHTVSCADILSLVARDSAYLAGGLDFEIPT GRRDGFVSKEDEVLSNVPHPEFGAKDLLKNFTAKGFTAEEMVTLSGAHSIGTSHCSSF TNRLYKYYGTYGTDPSMPAAYAADMKSKCPPETAAQQDATMVQLDDVTPFKMDNQYYR NVLAGNVTFASDVALLDTPETAALVRLYAAGDPAAWLARFAAALVKVSKLDVLTGGEG EIRLNCSRIN</aaseq>

Gene Sequence

<dnaseqindica>89..346#518..842#1415..1866#acagccatttcactagacagcttagctagcaggtagctgagagagttccttcgatctcgatctctgcacggcgacgataagataagcaatggcagtctcgtcgccggcgccgtcgtctctgcatgtgccgatggccgctgcggcactattagggatgctgatgatgatgtcgtcggcgccggagatgaaggtggaggcggccggcgggttgtccgtcgggttctacgccgaatcgtgccccaaggcggaggcgatcgtccgggacacggtgaccaaggcgttcgagaaggcgcccggcacgccggccgacctcatccgcctcttcttccacgactgcttcgtccgcgtaagtatagcaccccgcttacgtggatgcatcgtgtccgtgccacgtgtgctcactaggcagctttgtgcttacgtggacgcaccatgtcgtgccacgtgtacttagcttatgttgacgcaccatatcgtgccatgtgttctaactaggcagctatatatgactctctagggatgtgacgcatcggtgttgctggagtcgacaccagggaacaaggcggagagggacaacaaggcgaacaaccctagcttggatgggtttgacgtcgtcgatgatgccaaggacctcctcgagaaggagtgtccacacaccgtctcttgcgccgacatcctctctctcgtggctcgtgatagcgcctaccttgctggtgggctcgacttcgagatcccaacaggtcgtcgtgatggcttcgtctctaaggaggatgaggtcctctccaacgtccctcacccggagttcggtgccaaagacctcctcaaaaacttcaccgctaaaggtacatattatatacttgtactacatagatacgcatatcatcggtaacaatttcatggggtcatcatatgcacttgccagtttatctaaagtcttgttaatgctctccctcataccgatgtcccataaatcatcatagagcgagttatgaatgcaagatagtgagagttgtttagctctgatatacggaaagtgtttttatccctcgagaggatatcccaacgtttatgattgccacttaaatagttataaaagtatgaaaaaaattaacaagatagattaatataatatatatcactctataaacatacaagttaaaatttaacttttacaagttgtattaaatataactgcaaatgttcaataattattttcaatttaatttgttcttttggttgtaactcgtagagtcgaatttgacttttatgtttatagagtgatatattttagatatctatattttatattaaattatcttgtcaattttttaaaaaatttagtaactatttagatgacatacaaccaacaaagaaatatcctctaataccatattaatgatatacgattacttaggttttacggcggaggagatggtgacgctgtcgggggcgcactctatcggcacgtctcactgctcatcgttcacaaaccggctgtacaagtactacggcacgtacggcacggacccgtcgatgccggcggcgtacgcggcggacatgaagagcaagtgcccgccggagacggcggcgcagcaggacgcgacgatggtgcagctcgacgacgtgacgccgttcaagatggacaaccagtactacaggaacgtgctcgccgggaacgtcacgttcgcctccgacgtggccctcctcgacacgccggagacggcggcgctcgtcaggctctacgccgccggcgaccccgcagcctggctcgcccgcttcgccgccgcgctggtcaaggtcagcaagctcgacgtgctcaccggcggcgagggggagatcaggctcaactgctccaggatcaactaattaactcaaattaaattcgcgtgaagtttgtgattctcatatatacaaacactactgccctgttgccatgcatgcatgaggctcatttgatttatttttccttatatgtttgtgcatgattcaatgtactactactactacaacaacttttgtttatttttattttcagtttcattttttaccttttgatgctgagtgtgccaattgggcaaaaataaattgtgcttctgaccatatatatgggtgaatttattcaaggagtaaaatgtgtgctattcatgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0135500, RefSeq:Os05g0135500