Os05g0135800

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Revision as of 10:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0135800| Description = Similar to Pto kinase interactor 1| Version = NM_001061111.1 GI:115461952 GeneID:4337734| Length = 4279 bp| Definit...")
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Gene Name

Os05g0135800

Description

Similar to Pto kinase interactor 1

Version

NM_001061111.1 GI:115461952 GeneID:4337734

Length

4279 bp

Definition

Oryza sativa Japonica Group Os05g0135800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2074189..2078467

Sequence Coding Region

2076356..2076440,2076544..2076791,2076868..2076994,2077114..2077387,2077469..2077601
,2077699..2077785,2078074..2078205

Expression

GEO Profiles:Os05g0135800

Genome Context

<gbrowseImage1> name=NC_008398:2074189..2078467 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2074189..2078467 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtgctttgcatgctgtggtgatgaagatactcaaggagtaccagacaacaggaatccatacccagggaaccatccagcaaggagcgatgcatatcgcacagctgatccaactccaagaggtcctcaacctgtgaaagtgcaaccaattgcagtccccatcattcctgttgatgaaattagggaagtgactaagaattttggtgatgaagctttgattggtgaaggttcctttggcagagtgtattttggtgttctaagaaatggtagaagtgcagcggtcaaaaagctagactctagtaagcagccagaccaagaatttttggcacaggtatctatggtgtcgaggcttaagcatgaacatgttgttgagctgcttggttattgtgttgatggaaatctccgtgtccttgcttatgagtttgcgactatgggttctcttcatgatatgcttcatggaaggaagggtgttaaaggagctcaacctggtccagtcttatcatgggcacaacgtgtgaagatagctgttggggcagcaaaaggcctggagtatcttcatgagaaagcacagcctcatatcatacacagggacatcaagtccagcaatgttctccttttcgatgatgatgttgctaaaatagctgactttgatttgtcaaaccaagctcctgacatggcagctcggcttcactctactagggttcttggaacctttggatatcatgcacctgagtatgcaatgactggacagcttagctccaagagtgatgtgtacagttttggagttgttcttcttgagctattgaccggaaggaaacctgttgaccatacattaccaaggggacagcagagtcttgtgacttgggccaccccaaggcttagtgaagacaaggttaggcaatgtgttgactcaagacttggaggggactatcctcctaaagctgtcgcaaagtttgcagctgttgcggcgttatgcgttcagtatgaagcggactttcgaccaaacatgagcattgtcgtgaaagcgctgcaacccctgctgaatgctcgggcaactaaccctggagaaaatgccgggtcataa</cdnaseq>

Protein Sequence

<aaseq>MSCFACCGDEDTQGVPDNRNPYPGNHPARSDAYRTADPTPRGPQ PVKVQPIAVPIIPVDEIREVTKNFGDEALIGEGSFGRVYFGVLRNGRSAAVKKLDSSK QPDQEFLAQVSMVSRLKHEHVVELLGYCVDGNLRVLAYEFATMGSLHDMLHGRKGVKG AQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNVLLFDDDVAKIADFD LSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVD HTLPRGQQSLVTWATPRLSEDKVRQCVDSRLGGDYPPKAVAKFAAVAALCVQYEADFR PNMSIVVKALQPLLNARATNPGENAGS</aaseq>

Gene Sequence

<dnaseqindica>2168..2252#2356..2603#2680..2806#2926..3199#3281..3413#3511..3597#3886..4017#acacacgctgtgctgctgctgctgccgctgctcctcctcctcctcttacatcccatcctcgccgcgatttccttcgccgccgccgccggcttcgtcttcttccccggcgccggggcacgcgaaaaggtgcgatcttgacgccggattcggcgccctctcgccctccctccccgaaagttcgctgctttttgctccgatctgtgcccggaatctctcgtgggtggatggatggattggactcggtgtgatctcttcttctttcgctggtggttgctccgccctcggggggcggttcagggttggggatttgggtgggtttggtggctggttctttggtgggttgccggctctgaatctggagggagcttgggttgggttccctttcttggttggtcaactttgatagtagcgtttactgtgaggtgagggggaagaagaactagctcctctcgtttttagctgtgattgctgcgcctgattcgtttgattcggttgttcgtctgattttttttttctcgctgaattctgcggcttcttgagctttgccaaagaccacggtgtgttactctttccgttagttggaggagaacatgttagttgattaacagcttgttgcgattagctaactgcgtgtattcgaggttgcggtagcatatcaattaggaataatgtccaattttgtagcgtcatgattgcaattgaagttttactgtgttcaatcattggcgtagtacttgtaggtataggcaagattgatgtttcagtgctgtaggagttgtgtggatttaggacagtgctagggataaagatgcgattgatgattggtcgagcttctttggcatgcatcctgaattggagtggtgcgaggacatgaccgcgtgagctaccggcatgagtgaagcagtgtgcccatgcaaataatttttgcatgctgttcttccatgctattctgtttagtctagtgcagactttgaagtggttatgaacttgtcacatttaatcagttgcctcacattctgcccttgtgttcataggatacatgtttgatttacaaatatggcatccaattaataatgcaatgttctaaccactggaagggtggctgaatgaataatttaataaaatttccatctgatgtgtattattggtgtctagggctaatgtggtatgtaaccctgtaggaaattggtaattattaacgatgccactgcagaatgagctgtcttctcatcagctctaataggaaaaggtggttattagttctggccttaggcagatttcaatcctacctgggcatcctttgcttagtttgtttccagcatatcagtatatttggttccagtgaacttgccgtgctgatcaagaattgtagtggttaagtttgtctggtgaaagaagcagtgttacctgaaaaatgtggccaattgttttttgccgaattgagcaccccaaatctaaaacgtactcggattcagcaaccttgtcgtcttctgagtagtatcttgcatgccgtttctctttccgaaatcacacacatgagccaactcgcttgtccgtttccgataatactgggaagaagagacaaatgagataactcatatgtggttttagtagctcagcactaccattataccattcaccatgcattgatacgtggtaccttcaagtagttcatcgggcatttgtggacataattcatttgattgtcctggttgggttgagaaaatgcacaaaaagttacataaaaagaataaggaaatgatgggaacaaaatggcttgtggagaaattactgatagatcttttagcacctcctttatttattccacatatgtcatgttctatgcattccactctctgcaaggtaagtgtgaaccctgagttttcgaagttaatttatttcattcactttcctattatctccacactttcatcaggttatttgtccatctacatagtattaactagttcaatcatgtgtctgtttgaatgtcttatggtggtgtatttgtgtttgcacttctgcttgtgtttttcaatttgtgctcattcaatttctctctctttgaccgtctgtctgatgctacttttctgtaaactaaatgcatgttgctggtttctaataaaaatctgcatgattctgttccagggtttgtttctagtagaatatgtcgtgctttgcatgctgtggtgatgaagatactcaaggagtaccagacaacaggaatccatacccagggaaccatccagcaagtaatggcactgggccttttgttataatcatctgcattgtcccattacatactgtggtttacagatggtgctcaagttttactgaactgcaatttgtctgcagggagcgatgcatatcgcacagctgatccaactccaagaggtcctcaacctgtgaaagtgcaaccaattgcagtccccatcattcctgttgatgaaattagggaagtgactaagaattttggtgatgaagctttgattggtgaaggttcctttggcagagtgtattttggtgttctaagaaatggtagaagtgcagcggtcaaaaagctagactctagtaagcagccagaccaagaatttttggcacaggtctgtgtttatctctgttaggaattctgcaacaagttttctttttcttgcaactcatttcaaaatgcatccacaggtatctatggtgtcgaggcttaagcatgaacatgttgttgagctgcttggttattgtgttgatggaaatctccgtgtccttgcttatgagtttgcgactatgggttctcttcatgatatgcttcatggtatggtctttgcacatctgtgcttttgtttcctttattcatatcttgaactcttgatagaattatggtgttattttaaactttgaataccattaaatgtggaaattgtatgtttacaggaaggaagggtgttaaaggagctcaacctggtccagtcttatcatgggcacaacgtgtgaagatagctgttggggcagcaaaaggcctggagtatcttcatgagaaagcacagcctcatatcatacacagggacatcaagtccagcaatgttctccttttcgatgatgatgttgctaaaatagctgactttgatttgtcaaaccaagctcctgacatggcagctcggcttcactctactagggttcttggaacctttggatatcatgcacctgagtatgttctggttttcttcaattctctataaaccttcagaattatatcaactactaatgttggtctaaattctgtggccaggtatgcaatgactggacagcttagctccaagagtgatgtgtacagttttggagttgttcttcttgagctattgaccggaaggaaacctgttgaccatacattaccaaggggacagcagagtcttgtgacttgggtaagtttcaatcgcatatgctattcgcggttattggaatattctggcttgcattctatttggtgggctgaattaatggtttattcaacattggcaggccaccccaaggcttagtgaagacaaggttaggcaatgtgttgactcaagacttggaggggactatcctcctaaagctgtcgcaaaggtatccgatattcagagacaacctcttttctgttttatcaccataggttattgaactagcagtctccagaaactatcttgacaacgtgcaaaaggaagctgatggctaaagattaattaaacagctaaccctaggattatatgtctgaaattcacatcgttcatgaagcatgtctggattcaacattaaatttgtcgtagatctattgtttgcagcacttgtacttgagattatgtttccttgtaagcccagtttttaaacatttgttcttctgtatgtttcaaacagtttgcagctgttgcggcgttatgcgttcagtatgaagcggactttcgaccaaacatgagcattgtcgtgaaagcgctgcaacccctgctgaatgctcgggcaactaaccctggagaaaatgccgggtcataaaactttggtctaccttttgtatgatagatattaagttaagaagtatgagacatcgatattgttcttgcggatgtgtggctggctggaagtgtgtacatttgtgattattcgtcccttgttgtaatcaccaaggttctagcaaccgaaaatatttgattcttcgcatcgggtgagacataacttgtctgaaggtgacatgcatatctatctaccttactcaagagggaaaacaaaattctgcatcttgaactgaactgaactg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0135800, RefSeq:Os05g0135800