Os03g0575200

From RiceWiki
Revision as of 19:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0575200

Description

Similar to Potassium transporter 1 (OsHAK1)

Version

NM_001057065.1 GI:115453858 GeneID:4333298

Length

4833 bp

Definition

Oryza sativa Japonica Group Os03g0575200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21762949..21767781

Sequence Coding Region

21763206..21763460,21763567..21764360,21764448..21764702,21764803..21764923,21765376..21765428
,21765639..21765899,21766394..21766444,21766560..21766808,21766917..21767139
,21767397..21767570

Expression

GEO Profiles:Os03g0575200

Genome Context

<gbrowseImage1> name=NC_008396:21762949..21767781 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21762949..21767781 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacagcagcaagccggtgcaagaggcagcaagctggagatcgtcgccgcccggggaggaagtggcggcagcagcagcgccggcgatgcggaggcgccgccgttggacgtcctgaggcaggactccctctaccgcgacgcgacgcggccggcccacggccaccatggacaggagagctggatgaggacgctgcggctggggttccagtgcgtgggaatcctgcacgccgacctcggcacgtcgccgctctacgtgtaccagaacacattcaagtacggcatcaagcacgaggacgacatcatcggcgtcctctccctcatcatctacagcttcgtgctattcaccatggtcaagatcgtcttcatcgccctccacgccaacgacgatggcgacggtgggacatttgctctgtactcgttgatctcgcggtacgccaaggtgtgcctgatcccaaaccagcaagccgaggatgagctggtgacgaggtacaacgaccacgggaagccgccggcgacgctgcggagggcgcagtggatgaagagccagctcgagaagaagcccgccaagattgccgtcttcttcctcaccatcttcgccaccgcgctggccatcagcgactgtgtgctaaacccttcagtctctgtactttcggcggtcaacggcttgaaacttagagcacctcatctgacaacagacgaagtggtctggatcacggtgggaatactggtggtgtttttcgcagtgcaacggtttggcactgacaagattggctacacatttgccccggttgttgttgtgtggctgttactcatctcagggattggcatctatgacttggtcaagtacgatgtcggtgtcttgagggcgttcaaccccaaatatatcatcgattatttccgacgaaataagaaggacggatgggtccagctcggtgaagttcttcttacatttaccggcacagaagctctctttgctgatttaggatacttcagcatcaaatcaattcagttaagctctacctttgtcttgctcccatcagtgttatgcacctacattgggcaagcagcatacctaaggaaacacatggatcagcagcacatacaaaacgctttcttcaattccattccaagacctctgttctggccaatgttcgttctcgctatcatgacgtcagtcatcggttgccaagccatggtgtcttgtgcctttgcaaccatgtcacacttgcagacactgaattgtttcccacggattaagatactgcacacatcaaggcgttattcaggacagttgtacagtcctgaagtgaacttcttcctctgcctactttcctgtgtaatcaccttaagtttcaggacgacaggtttcattgtcaaagcacatgaaatttgtgtggtccttgtgatggttatcacaactatcctgatgactatagtcatgcttctcgtatggaaagtaaatatttggtggatcgttctattctttgtcgtcttcatgtcaacggagaccgtctacctatcagcagttctctacaagttcacaaaaggaccatacatgcccttggctatgtcagctgttctaatggtgatcatgttcgtgtggcactacgtgcatgtgaagcgatacaagtttgagcttgaacataccgtatcacctaataaggtcagagagctccttgaacggcgtgatctaaagagggttcctggtgtggggctcttctacactgaattggtgcaaggcatcccaccgatattccctcaccttatcgagaaaatcccgaccattcactcggtgatcgtgttcatctctatgaagcacttgcctatccctcatgtcgatgtctcggagcgcttcctcttccggcaagtggagcccaaggagtgcatggtgtttcgatgtgtcgcacgatatggatatcgggatactctagagatggctgatgactttgtcaccactcttgtcgagtacctccagtactatatccgggacctaaatctatacaacacggttgagccactcaagatgagctgcccaagcattagaattgatagtttttcctgggatagacgaccctcagggcatggcatttatgccgaggagatgcttacaccaatccaatcattttctgagctcacaatgcatcctgttggtatgagcagccgattagcgcaattccaaacaactaagatgagccttgaagagatgttgaagattgaggaagaccaaaagttgatccaacgagaagtggacaatggtgtggtttacatacttggggagagtgaagtggtagcgaaaccacattccaacttgcttaagaaagttgttgtaaactacatattcaactttctgaggaaaaactctcgaaaaggagagaagatgttgtctattccacgccgcaagttgctcaaggttggaatcacgtacgaaatataa</cdnaseq>

Protein Sequence

<aaseq>MAQQQAGARGSKLEIVAARGGSGGSSSAGDAEAPPLDVLRQDSL YRDATRPAHGHHGQESWMRTLRLGFQCVGILHADLGTSPLYVYQNTFKYGIKHEDDII GVLSLIIYSFVLFTMVKIVFIALHANDDGDGGTFALYSLISRYAKVCLIPNQQAEDEL VTRYNDHGKPPATLRRAQWMKSQLEKKPAKIAVFFLTIFATALAISDCVLNPSVSVLS AVNGLKLRAPHLTTDEVVWITVGILVVFFAVQRFGTDKIGYTFAPVVVVWLLLISGIG IYDLVKYDVGVLRAFNPKYIIDYFRRNKKDGWVQLGEVLLTFTGTEALFADLGYFSIK SIQLSSTFVLLPSVLCTYIGQAAYLRKHMDQQHIQNAFFNSIPRPLFWPMFVLAIMTS VIGCQAMVSCAFATMSHLQTLNCFPRIKILHTSRRYSGQLYSPEVNFFLCLLSCVITL SFRTTGFIVKAHEICVVLVMVITTILMTIVMLLVWKVNIWWIVLFFVVFMSTETVYLS AVLYKFTKGPYMPLAMSAVLMVIMFVWHYVHVKRYKFELEHTVSPNKVRELLERRDLK RVPGVGLFYTELVQGIPPIFPHLIEKIPTIHSVIVFISMKHLPIPHVDVSERFLFRQV EPKECMVFRCVARYGYRDTLEMADDFVTTLVEYLQYYIRDLNLYNTVEPLKMSCPSIR IDSFSWDRRPSGHGIYAEEMLTPIQSFSELTMHPVGMSSRLAQFQTTKMSLEEMLKIE EDQKLIQREVDNGVVYILGESEVVAKPHSNLLKKVVVNYIFNFLRKNSRKGEKMLSIP RRKLLKVGITYEI</aaseq>

Gene Sequence

<dnaseqindica>4322..4576#3422..4215#3080..3334#2859..2979#2354..2406#1883..2143#1338..1388#974..1222#643..865#212..385#gagcttagctgctgcgaagttacacggctacgcaccgttcttgctaactatatacgatttcttatacacttatttcttttgaggcatagcgtgctggctaagtataggtaggtagctagctctgccgctgcttataaaaaggcagtgctgcacggtggtgagcgtacctagctagagcatagagaagcaggaaagttttggagatcgatcgatggcacagcagcaagccggtgcaagaggcagcaagctggagatcgtcgccgcccggggaggaagtggcggcagcagcagcgccggcgatgcggaggcgccgccgttggacgtcctgaggcaggactccctctaccgcgacgcgacgcggccggcccacggccaccatggacaggtgcttgctcatactaagctattataagttatatgcatgcatggccatggccgaaaattcagcaaaaacatttgtggcactagctttcctcttgccatccatgaacatggcgaacgaatctgccgcaagcagaaactaagttgtactccctccgtcttataaaaaacttaacttagggggaacgaatctggacaatattatctagtagcacacatagtgttggctaggtaggctgaatgagtggttgatatatgcaggagagctggatgaggacgctgcggctggggttccagtgcgtgggaatcctgcacgccgacctcggcacgtcgccgctctacgtgtaccagaacacattcaagtacggcatcaagcacgaggacgacatcatcggcgtcctctccctcatcatctacagcttcgtgctattcaccatggtcaagatcgtcttcatcgccctccacgccaacgacgatggcgacggtgcgtgcagtgtgcccgacgacgcttcccaatacaagtcttctttgatcgatcatcactagttgtttgtttgttcttactatcgattataattaatggttttttcaggtgggacatttgctctgtactcgttgatctcgcggtacgccaaggtgtgcctgatcccaaaccagcaagccgaggatgagctggtgacgaggtacaacgaccacgggaagccgccggcgacgctgcggagggcgcagtggatgaagagccagctcgagaagaagcccgccaagattgccgtcttcttcctcaccatcttcgccaccgcgctggccatcagcgactgtgtgctaaacccttcagtctctggtacactatatagctagattaatgcacaattattgatttacgcatagtaataattgatatagttagtgttcgatcgacctgacatgattttgatctttttgttgttttgcttcagtactttcggcggtcaacggcttgaaacttagagcacctcatctgacaacaggtacagtgagaaaacagaaagcagtagtagtattaccccccggaattcagtttaaaaaatggcgagtctttaaacgaacagtgaaccaaataacgtgaaaagcaaattgtcggttaatcaaatactacatggctacagtggtgcatggaccaaaagtctaatccatattatacattattttcggtttcacacgttgcatgtgacaaaattgcatgcaaacgcgatcaagtctaacataattaatgcataaggactagatcactccttgaactgcacaactaatgtttcctgatcatcttgtcaagactattaactgtccacaatattataggagatctcgattaaaaaactgatgctacggttgattaattaatttactaggttgtgacccaaattgcaacgtgaacactatggtatcatgacagaacttgtactgatcaacgcgcatatagatttactagttaattgctgatgaactattttcatctgaacagacgaagtggtctggatcacggtgggaatactggtggtgtttttcgcagtgcaacggtttggcactgacaagattggctacacatttgccccggttgttgttgtgtggctgttactcatctcagggattggcatctatgacttggtcaagtacgatgtcggtgtcttgagggcgttcaaccccaaatatatcatcgattatttccgacgaaataagaaggacggatgggtccagctcggtgaagttcttcttacatttaccggtgagcttaattaattacatgttgtactgagtcttgtgtgacagaaatgaacgaacaaacattaatgtcattaggcagatgatattgcattcactctgttcattttgttaagcatgatgcagtgacaggacagacatgtgcatctgcataattgtggatagttgtaaataagtttacttaattgaagcaattttgtcttttgaataacaggcacagaagctctctttgctgatttaggatacttcagcatcaaatcaattcaggtagactgttattacttaacatccctttgaattattcaagctgaggtctgaagatatttacttttttctagggtaatgatagaagtgtctccatatataatttgaaagtgatgcaaatataattcattgatattaattatttgaaggcccagttaatttcttccctgttatgttgactggtctggagtgaatagggttgaaagatgaaatacagccagtggctgtgttgtgttggtaaagcacacgttaacatagtacaccaccattaattatgtgccattgctttgacgtgatggtctcaccaaacaaaggataacttactaatgcaacttttcaagtgctggtgttttgccaatatttatccgatataggagtacatatatataggtagttgtacatatatcatatataattaaacattttgaaactgatcaatcttttctatgtttcagttaagctctacctttgtcttgctcccatcagtgttatgcacctacattgggcaagcagcatacctaaggaaacacatggatcagcagcacatacaaaacgctttcttcaattccattccaagtatgtaaaccaaaacatacatcacctatcataagcttcgaaattcatcgtcatcacgtactgacagaatatacatggctcttccgattgtaatttacaggacctctgttctggccaatgttcgttctcgctatcatgacgtcagtcatcggttgccaagccatggtgtcttgtgcctttgcaaccatgtcacacttgcagacactgaattgtttcccacggattaagatactgcacacatcaaggcgttattcaggacagttgtacagtcctgaagtgaacttcttcctctgcctactttcctgtgtaatcaccttaagtttcaggacgacaggtttcattgtcaaagcacatggtaaggacacttctaaatgtgcaaccttatttattttttaatttcaaatactgatgatactgactattcttcttcattgtcaaacagaaatttgtgtggtccttgtgatggttatcacaactatcctgatgactatagtcatgcttctcgtatggaaagtaaatatttggtggatcgttctattctttgtcgtcttcatgtcaacggagaccgtctacctatcagcagttctctacaagttcacaaaaggaccatacatgcccttggctatgtcagctgttctaatggtgatcatgttcgtgtggcactacgtgcatgtgaagcgatacaagtttgagcttgaacataccgtatcacctaataaggtcagagagctccttgaacggcgtgatctaaagagggttcctggtgtggggctcttctacactgaattggtgcaaggcatcccaccgatattccctcaccttatcgagaaaatcccgaccattcactcggtgatcgtgttcatctctatgaagcacttgcctatccctcatgtcgatgtctcggagcgcttcctcttccggcaagtggagcccaaggagtgcatggtgtttcgatgtgtcgcacgatatggatatcgggatactctagagatggctgatgactttgtcaccactcttgtcgagtacctccagtactatatccgggacctaaatctatacaacacggttgagccactcaagatgagctgcccaagcattagaattgatagtttttcctgggatagacgaccctcagggcatggcatttatgccgaggagatgcttacaccaatccaatcattttctgagctcacaatgcatcctgttggtatgagcagccgattagcgcaattccaagtaagaaatcgatatactaattaattaccatatagctgaacaacatgttgaaaattatgtattgttcttatatctggatgctaataatttcctttttgtaaatcagacaactaagatgagccttgaagagatgttgaagattgaggaagaccaaaagttgatccaacgagaagtggacaatggtgtggtttacatacttggggagagtgaagtggtagcgaaaccacattccaacttgcttaagaaagttgttgtaaactacatattcaactttctgaggaaaaactctcgaaaaggagagaagatgttgtctattccacgccgcaagttgctcaaggttggaatcacgtacgaaatataaacatgccaacaatcagtaagatggtggcttatacacaaggggtgtagatttgtcgagcaagcatatatcatgcatgcagggtttgcttacttgcaaatgtacttggattttgtttgcttgcgtgactctccatgataggaaaaaaaataaaagaattacatgcaaggaggaaaatatgccagcaaaatgaaaacagtcataatcgagaatatcacaatgcgatatatgggttccatatatatagaatttcttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0575200, RefSeq:Os03g0575200